RNA–Protein interactions for RNA: ENST00000580222.5

LIMD2-209, Transcript of LIM domain containing 2, humanhuman

TSL 3

Gene LIMD2, Length 846 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2-209ENST00000580222 SMU1Q2TAY7 513 aa17.79■□□□□ 0.44
LIMD2-209ENST00000580222 EPGNQ6UW88 154 aa17.79■□□□□ 0.44
LIMD2-209ENST00000580222 NAXEQ8NCW5 288 aa17.79■□□□□ 0.44
LIMD2-209ENST00000580222 C16orf78Q8WTQ4 265 aa17.79■□□□□ 0.44
LIMD2-209ENST00000580222 MAELQ96JY0 434 aaKnown RBP17.79■□□□□ 0.44
LIMD2-209ENST00000580222 SIKE1Q9BRV8 207 aa17.79■□□□□ 0.44
LIMD2-209ENST00000580222 FAIM2Q9BWQ8 316 aa17.79■□□□□ 0.44
LIMD2-209ENST00000580222 NSRP1Q9H0G5 558 aaKnown RBP17.79■□□□□ 0.44
LIMD2-209ENST00000580222 PRTFDC1Q9NRG1 225 aa17.79■□□□□ 0.44
LIMD2-209ENST00000580222 ALKBH4Q9NXW9 302 aa17.79■□□□□ 0.44
LIMD2-209ENST00000580222 NOP53Q9NZM5 478 aaKnown RBP17.79■□□□□ 0.44
LIMD2-209ENST00000580222 EIF3LQ9Y262 564 aaKnown RBP17.79■□□□□ 0.44
LIMD2-209ENST00000580222 HIVEP2P31629 2446 aa17.79■□□□□ 0.44
LIMD2-209ENST00000580222 CLDN4O14493 209 aa17.78■□□□□ 0.44
LIMD2-209ENST00000580222 PRKRAO75569 313 aaKnown RBP17.78■□□□□ 0.44
LIMD2-209ENST00000580222 OR6B1O95007 311 aa17.78■□□□□ 0.44
LIMD2-209ENST00000580222 SDC1P18827 310 aa17.78■□□□□ 0.44
LIMD2-209ENST00000580222 ENDOUP21128 410 aaKnown RBP17.78■□□□□ 0.44
LIMD2-209ENST00000580222 HNRNPFP52597 415 aaKnown RBP17.78■□□□□ 0.44
LIMD2-209ENST00000580222 EMX2Q04743 252 aa17.78■□□□□ 0.44
LIMD2-209ENST00000580222 RIPPLY2Q5TAB7 128 aa17.78■□□□□ 0.44
LIMD2-209ENST00000580222 NDUFAF5Q5TEU4 345 aa17.78■□□□□ 0.44
LIMD2-209ENST00000580222 IL23RQ5VWK5 629 aa17.78■□□□□ 0.44
LIMD2-209ENST00000580222 C18orf63Q68DL7 685 aa17.78■□□□□ 0.44
LIMD2-209ENST00000580222 POMZP3Q6PJE2 187 aa17.78■□□□□ 0.44
LIMD2-209ENST00000580222 LARP4Q71RC2 724 aaKnown RBP eCLIP17.78■□□□□ 0.44
LIMD2-209ENST00000580222 ZNF595Q8IYB9 648 aa17.78■□□□□ 0.44
LIMD2-209ENST00000580222 TMEM132CQ8N3T6 1108 aa17.78■□□□□ 0.44
LIMD2-209ENST00000580222 LIX1Q8N485 282 aa17.78■□□□□ 0.44
LIMD2-209ENST00000580222 TMEM52Q8NDY8 209 aa17.78■□□□□ 0.44
LIMD2-209ENST00000580222 RFWD2Q8NHY2 731 aa17.78■□□□□ 0.44
LIMD2-209ENST00000580222 LINC01560Q8TB33 94 aa17.78■□□□□ 0.44
LIMD2-209ENST00000580222 ACTRT2Q8TDY3 377 aa17.78■□□□□ 0.44
LIMD2-209ENST00000580222 TM4SF18Q96CE8 201 aa17.78■□□□□ 0.44
LIMD2-209ENST00000580222 ZNF317Q96PQ6 595 aaPredicted RBP17.78■□□□□ 0.44
LIMD2-209ENST00000580222 MYNNQ9NPC7 610 aa17.78■□□□□ 0.44
LIMD2-209ENST00000580222 TCF7L2Q9NQB0 619 aa17.78■□□□□ 0.44
LIMD2-209ENST00000580222 SPRR3Q9UBC9 169 aa17.78■□□□□ 0.44
LIMD2-209ENST00000580222 DCTN4Q9UJW0 460 aa17.78■□□□□ 0.44
LIMD2-209ENST00000580222 ACAD8Q9UKU7 415 aa17.78■□□□□ 0.44
LIMD2-209ENST00000580222 A0A1W2PR48 441 aa17.77■□□□□ 0.44
LIMD2-209ENST00000580222 C1orf226A1L170 272 aa17.77■□□□□ 0.44
LIMD2-209ENST00000580222 CYR61O00622 381 aa17.77■□□□□ 0.44
LIMD2-209ENST00000580222 SMAD7O15105 426 aaKnown RBP17.77■□□□□ 0.44
LIMD2-209ENST00000580222 PRPS2P11908 318 aa17.77■□□□□ 0.44
LIMD2-209ENST00000580222 BCKDHAP12694 445 aa17.77■□□□□ 0.44
LIMD2-209ENST00000580222 PPP2R1BP30154 601 aa17.77■□□□□ 0.44
LIMD2-209ENST00000580222 ALDH9A1P49189 494 aa17.77■□□□□ 0.44
LIMD2-209ENST00000580222 IDH3AP50213 366 aa17.77■□□□□ 0.44
LIMD2-209ENST00000580222 GPR143P51810 404 aa17.77■□□□□ 0.44
LIMD2-209ENST00000580222 WNT3P56703 355 aa17.77■□□□□ 0.44
LIMD2-209ENST00000580222 SLC13A2Q13183 592 aa17.77■□□□□ 0.44
LIMD2-209ENST00000580222 ZNF750Q32MQ0 723 aa17.77■□□□□ 0.44
LIMD2-209ENST00000580222 OR52E8Q6IFG1 317 aa17.77■□□□□ 0.44
LIMD2-209ENST00000580222 CGB2Q6NT52 195 aa17.77■□□□□ 0.44
LIMD2-209ENST00000580222 IL20RBQ6UXL0 311 aa17.77■□□□□ 0.44
LIMD2-209ENST00000580222 QSOX2Q6ZRP7 698 aa17.77■□□□□ 0.44
LIMD2-209ENST00000580222 CEP70Q8NHQ1 597 aa17.77■□□□□ 0.44
LIMD2-209ENST00000580222 CLHC1Q8NHS4 586 aa17.77■□□□□ 0.44
LIMD2-209ENST00000580222 RNASE6Q93091 150 aaKnown RBP17.77■□□□□ 0.44
LIMD2-209ENST00000580222 TSSK3Q96PN8 268 aa17.77■□□□□ 0.44
LIMD2-209ENST00000580222 OR52B2Q96RD2 323 aa17.77■□□□□ 0.44
LIMD2-209ENST00000580222 EBF4Q9BQW3 602 aa17.77■□□□□ 0.44
LIMD2-209ENST00000580222 RPF2Q9H7B2 306 aaKnown RBP17.77■□□□□ 0.44
LIMD2-209ENST00000580222 ASIC5Q9NY37 505 aa17.77■□□□□ 0.44
LIMD2-209ENST00000580222 ERVK-11Q9UQG0 969 aa17.77■□□□□ 0.44
LIMD2-209ENST00000580222 MMACHCQ9Y4U1 282 aa17.77■□□□□ 0.44
LIMD2-209ENST00000580222 A0A0G2JND7 137 aa17.76■□□□□ 0.43
LIMD2-209ENST00000580222 GLOD5A6NK44 160 aa17.76■□□□□ 0.43
LIMD2-209ENST00000580222 FAM171A2A8MVW0 826 aa17.76■□□□□ 0.43
LIMD2-209ENST00000580222 AQP7O14520 342 aa17.76■□□□□ 0.43
LIMD2-209ENST00000580222 WDR1O75083 606 aa17.76■□□□□ 0.43
LIMD2-209ENST00000580222 OR2J2O76002 312 aa17.76■□□□□ 0.43
LIMD2-209ENST00000580222 EPXP11678 715 aa17.76■□□□□ 0.43
LIMD2-209ENST00000580222 BMP5P22003 454 aa17.76■□□□□ 0.43
LIMD2-209ENST00000580222 ASMTP46597 345 aa17.76■□□□□ 0.43
LIMD2-209ENST00000580222 SSR4P51571 173 aa17.76■□□□□ 0.43
LIMD2-209ENST00000580222 SEC24CP53992 1094 aa17.76■□□□□ 0.43
LIMD2-209ENST00000580222 C2orf80Q0P641 193 aa17.76■□□□□ 0.43
LIMD2-209ENST00000580222 FOXO1Q12778 655 aa17.76■□□□□ 0.43
LIMD2-209ENST00000580222 SF3A3Q12874 501 aaKnown RBP eCLIP17.76■□□□□ 0.43
LIMD2-209ENST00000580222 HEPACAMQ14CZ8 416 aa17.76■□□□□ 0.43
LIMD2-209ENST00000580222 LSM12Q3MHD2 195 aaKnown RBP17.76■□□□□ 0.43
LIMD2-209ENST00000580222 SHEQ5VZ18 495 aa17.76■□□□□ 0.43
LIMD2-209ENST00000580222 FBXW10Q5XX13 1052 aa17.76■□□□□ 0.43
LIMD2-209ENST00000580222 OGFOD2Q6N063 350 aa17.76■□□□□ 0.43
LIMD2-209ENST00000580222 IKBIPQ70UQ0 350 aa17.76■□□□□ 0.43
LIMD2-209ENST00000580222 SPATA19Q7Z5L4 167 aa17.76■□□□□ 0.43
LIMD2-209ENST00000580222 CLNKQ7Z7G1 428 aa17.76■□□□□ 0.43
LIMD2-209ENST00000580222 SLC22A16Q86VW1 577 aa17.76■□□□□ 0.43
LIMD2-209ENST00000580222 B3GNT7Q8NFL0 401 aa17.76■□□□□ 0.43
LIMD2-209ENST00000580222 CCDC28BQ9BUN5 200 aa17.76■□□□□ 0.43
LIMD2-209ENST00000580222 FAM107BQ9H098 131 aa17.76■□□□□ 0.43
LIMD2-209ENST00000580222 MIEF1Q9NQG6 463 aa17.76■□□□□ 0.43
LIMD2-209ENST00000580222 PRDM9Q9NQV7 894 aa17.76■□□□□ 0.43
LIMD2-209ENST00000580222 BEX4Q9NWD9 120 aaPredicted RBP17.76■□□□□ 0.43
LIMD2-209ENST00000580222 PCDHA9Q9Y5H5 950 aa17.76■□□□□ 0.43
LIMD2-209ENST00000580222 CLCN2P51788 898 aa17.75■□□□□ 0.43
LIMD2-209ENST00000580222 HSD17B7P56937 341 aa17.75■□□□□ 0.43
LIMD2-209ENST00000580222 POU4F3Q15319 338 aa17.75■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms