RNA–Protein interactions for RNA: ENST00000567805.5

CLK3-219, Transcript of CDC like kinase 3, humanhuman

TSL 3

Gene CLK3, Length 327 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-219ENST00000567805 TAS2R7Q9NYW3 318 aa4.38□□□□□ -1.71
CLK3-219ENST00000567805 SENP1Q9P0U3 644 aa4.38□□□□□ -1.71
CLK3-219ENST00000567805 SPRR3Q9UBC9 169 aa4.38□□□□□ -1.71
CLK3-219ENST00000567805 TNFRSF10DQ9UBN6 386 aa4.38□□□□□ -1.71
CLK3-219ENST00000567805 RNF6Q9Y252 685 aa4.38□□□□□ -1.71
CLK3-219ENST00000567805 GPR55Q9Y2T6 319 aaPredicted RBP4.38□□□□□ -1.71
CLK3-219ENST00000567805 C15orf41Q9Y2V0 281 aa4.38□□□□□ -1.71
CLK3-219ENST00000567805 WBP11Q9Y2W2 641 aaKnown RBP4.38□□□□□ -1.71
CLK3-219ENST00000567805 FAM215AQ9Y5M1 114 aa4.38□□□□□ -1.71
CLK3-219ENST00000567805 PKDREJQ9NTG1 2253 aa4.38□□□□□ -1.71
CLK3-219ENST00000567805 KIAA1549Q9HCM3 1950 aa4.38□□□□□ -1.71
CLK3-219ENST00000567805 INTS1Q8N201 2190 aaKnown RBP4.37□□□□□ -1.71
CLK3-219ENST00000567805 A0A087WV62 115 aa4.37□□□□□ -1.71
CLK3-219ENST00000567805 A0A0G2JNJ9 132 aa4.37□□□□□ -1.71
CLK3-219ENST00000567805 NKX2-6A6NCS4 301 aa4.37□□□□□ -1.71
CLK3-219ENST00000567805 PRAMEF25A6NGN4 478 aa4.37□□□□□ -1.71
CLK3-219ENST00000567805 FAM90A27PA6NNH2 459 aa4.37□□□□□ -1.71
CLK3-219ENST00000567805 HSPB2A8KAH6 182 aa4.37□□□□□ -1.71
CLK3-219ENST00000567805 AHRRA9YTQ3 701 aa4.37□□□□□ -1.71
CLK3-219ENST00000567805 MYO1GB0I1T2 1018 aa4.37□□□□□ -1.71
CLK3-219ENST00000567805 NPIPB8E9PQR5 432 aa4.37□□□□□ -1.71
CLK3-219ENST00000567805 J3QL48 77 aa4.37□□□□□ -1.71
CLK3-219ENST00000567805 SLC28A1O00337 649 aa4.37□□□□□ -1.71
CLK3-219ENST00000567805 PLOD2O00469 737 aa4.37□□□□□ -1.71
CLK3-219ENST00000567805 GNB5O14775 395 aa4.37□□□□□ -1.71
CLK3-219ENST00000567805 RGS14O43566 566 aa4.37□□□□□ -1.71
CLK3-219ENST00000567805 PLOD3O60568 738 aa4.37□□□□□ -1.71
CLK3-219ENST00000567805 TSPAN2O60636 221 aa4.37□□□□□ -1.71
CLK3-219ENST00000567805 TRIM13O60858 407 aa4.37□□□□□ -1.71
CLK3-219ENST00000567805 ICOSLGO75144 302 aa4.37□□□□□ -1.71
CLK3-219ENST00000567805 COQ9O75208 318 aa4.37□□□□□ -1.71
CLK3-219ENST00000567805 UGT2B11O75310 529 aa4.37□□□□□ -1.71
CLK3-219ENST00000567805 ERN1O75460 977 aaKnown RBP4.37□□□□□ -1.71
CLK3-219ENST00000567805 TRAPPC6AO75865 159 aa4.37□□□□□ -1.71
CLK3-219ENST00000567805 TOXO94900 526 aa4.37□□□□□ -1.71
CLK3-219ENST00000567805 CHEK2O96017 543 aa4.37□□□□□ -1.71
CLK3-219ENST00000567805 ACTL6AO96019 429 aa4.37□□□□□ -1.71
CLK3-219ENST00000567805 IFI6P09912 130 aa4.37□□□□□ -1.71
CLK3-219ENST00000567805 NUDT17P0C025 328 aa4.37□□□□□ -1.71
CLK3-219ENST00000567805 NEFHP12036 1026 aa4.37□□□□□ -1.71
CLK3-219ENST00000567805 PRPH2P23942 346 aa4.37□□□□□ -1.71
CLK3-219ENST00000567805 PTPN6P29350 595 aa4.37□□□□□ -1.71
CLK3-219ENST00000567805 IL12BP29460 328 aa4.37□□□□□ -1.71
CLK3-219ENST00000567805 NTSP30990 170 aa4.37□□□□□ -1.71
CLK3-219ENST00000567805 GCKP35557 465 aa4.37□□□□□ -1.71
CLK3-219ENST00000567805 KRT20P35900 424 aa4.37□□□□□ -1.71
CLK3-219ENST00000567805 PTGDSP41222 190 aa4.37□□□□□ -1.71
CLK3-219ENST00000567805 TRPC1P48995 793 aa4.37□□□□□ -1.71
CLK3-219ENST00000567805 NCBP2P52298 156 aaKnown RBP eCLIP4.37□□□□□ -1.71
CLK3-219ENST00000567805 PNLIPRP2P54317 469 aa4.37□□□□□ -1.71
CLK3-219ENST00000567805 VSNL1P62760 191 aa4.37□□□□□ -1.71
CLK3-219ENST00000567805 MRPS22P82650 360 aaKnown RBP4.37□□□□□ -1.71
CLK3-219ENST00000567805 CRYZQ08257 329 aaKnown RBP4.37□□□□□ -1.71
CLK3-219ENST00000567805 IFFO1Q0D2I5 559 aa4.37□□□□□ -1.71
CLK3-219ENST00000567805 C2orf80Q0P641 193 aa4.37□□□□□ -1.71
CLK3-219ENST00000567805 EFR3AQ14156 821 aa4.37□□□□□ -1.71
CLK3-219ENST00000567805 PCLAFQ15004 111 aa4.37□□□□□ -1.71
CLK3-219ENST00000567805 KIAA0040Q15053 153 aa4.37□□□□□ -1.71
CLK3-219ENST00000567805 TOMM20Q15388 145 aa4.37□□□□□ -1.71
CLK3-219ENST00000567805 HSPB2Q16082 182 aa4.37□□□□□ -1.71
CLK3-219ENST00000567805 SLC25A35Q3KQZ1 300 aa4.37□□□□□ -1.71
CLK3-219ENST00000567805 CLEC6AQ6EIG7 209 aa4.37□□□□□ -1.71
CLK3-219ENST00000567805 FAM71E1Q6IPT2 247 aa4.37□□□□□ -1.71
CLK3-219ENST00000567805 NOXRED1Q6NXP6 359 aa4.37□□□□□ -1.71
CLK3-219ENST00000567805 EMBQ6PCB8 327 aa4.37□□□□□ -1.71
CLK3-219ENST00000567805 ANGPTL8Q6UXH0 198 aa4.37□□□□□ -1.71
CLK3-219ENST00000567805 MEX3BQ6ZN04 569 aaKnown RBP4.37□□□□□ -1.71
CLK3-219ENST00000567805 LACC1Q8IV20 430 aa4.37□□□□□ -1.71
CLK3-219ENST00000567805 CCDC71Q8IV32 467 aaPredicted RBP4.37□□□□□ -1.71
CLK3-219ENST00000567805 C10orf107Q8IVU9 208 aa4.37□□□□□ -1.71
CLK3-219ENST00000567805 DMRTC2Q8IXT2 367 aaPredicted RBP4.37□□□□□ -1.71
CLK3-219ENST00000567805 ULK2Q8IYT8 1036 aa4.37□□□□□ -1.71
CLK3-219ENST00000567805 FAM9CQ8IZT9 166 aa4.37□□□□□ -1.71
CLK3-219ENST00000567805 ZNF295-AS1Q8N0V1 137 aa4.37□□□□□ -1.71
CLK3-219ENST00000567805 CLYBLQ8N0X4 340 aa4.37□□□□□ -1.71
CLK3-219ENST00000567805 C4orf33Q8N1A6 199 aa4.37□□□□□ -1.71
CLK3-219ENST00000567805 FAM83FQ8NEG4 500 aaPredicted RBP4.37□□□□□ -1.71
CLK3-219ENST00000567805 OR7G2Q8NG99 324 aa4.37□□□□□ -1.71
CLK3-219ENST00000567805 CDC26Q8NHZ8 85 aa4.37□□□□□ -1.71
CLK3-219ENST00000567805 KAT2AQ92830 837 aa4.37□□□□□ -1.71
CLK3-219ENST00000567805 TMBIM1Q969X1 311 aa4.37□□□□□ -1.71
CLK3-219ENST00000567805 TMCO6Q96DC7 493 aa4.37□□□□□ -1.71
CLK3-219ENST00000567805 DTNBP1Q96EV8 351 aa4.37□□□□□ -1.71
CLK3-219ENST00000567805 SLC35A4Q96G79 324 aa4.37□□□□□ -1.71
CLK3-219ENST00000567805 LURAP1Q96LR2 239 aa4.37□□□□□ -1.71
CLK3-219ENST00000567805 VSTM2LQ96N03 204 aa4.37□□□□□ -1.71
CLK3-219ENST00000567805 NODALQ96S42 347 aa4.37□□□□□ -1.71
CLK3-219ENST00000567805 ADOQ96SZ5 270 aa4.37□□□□□ -1.71
CLK3-219ENST00000567805 TIMP4Q99727 224 aa4.37□□□□□ -1.71
CLK3-219ENST00000567805 OSBPL11Q9BXB4 747 aa4.37□□□□□ -1.71
CLK3-219ENST00000567805 UCK2Q9BZX2 261 aa4.37□□□□□ -1.71
CLK3-219ENST00000567805 ROPN1BQ9BZX4 212 aaPredicted RBP4.37□□□□□ -1.71
CLK3-219ENST00000567805 PRDM14Q9GZV8 571 aa4.37□□□□□ -1.71
CLK3-219ENST00000567805 IQCGQ9H095 443 aaKnown RBP4.37□□□□□ -1.71
CLK3-219ENST00000567805 C12orf65Q9H3J6 166 aaKnown RBP4.37□□□□□ -1.71
CLK3-219ENST00000567805 ANKRA2Q9H9E1 313 aa4.37□□□□□ -1.71
CLK3-219ENST00000567805 ROPN1Q9HAT0 212 aaPredicted RBP4.37□□□□□ -1.71
CLK3-219ENST00000567805 FOLH1BQ9HBA9 442 aa4.37□□□□□ -1.71
CLK3-219ENST00000567805 GALNT9Q9HCQ5 603 aa4.37□□□□□ -1.71
CLK3-219ENST00000567805 TNFRSF12AQ9NP84 129 aa4.37□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms