RNA–Protein interactions for RNA: ENST00000563573.5

CDR2-203, Transcript of cerebellar degeneration related protein 2, humanhuman

TSL 4

Gene CDR2, Length 556 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDR2-203ENST00000563573 ANKRD34CP0C6C1 535 aa4.34□□□□□ -1.71
CDR2-203ENST00000563573 FAM58BPP0C7Q3 252 aa4.34□□□□□ -1.71
CDR2-203ENST00000563573 PIM1P11309 404 aaPredicted RBP4.34□□□□□ -1.71
CDR2-203ENST00000563573 ALOX12P18054 663 aa4.34□□□□□ -1.71
CDR2-203ENST00000563573 HIST1H1TP22492 207 aaPredicted RBP4.34□□□□□ -1.71
CDR2-203ENST00000563573 JAK1P23458 1154 aa4.34□□□□□ -1.71
CDR2-203ENST00000563573 ATP5A1P25705 553 aaKnown RBP4.34□□□□□ -1.71
CDR2-203ENST00000563573 PTPN4P29074 926 aa4.34□□□□□ -1.71
CDR2-203ENST00000563573 TIA1P31483 386 aaKnown RBP eCLIP4.34□□□□□ -1.71
CDR2-203ENST00000563573 HNRNPH1P31943 449 aaKnown RBP4.34□□□□□ -1.71
CDR2-203ENST00000563573 BSGP35613 385 aa4.34□□□□□ -1.71
CDR2-203ENST00000563573 MAPK12P53778 367 aa4.34□□□□□ -1.71
CDR2-203ENST00000563573 SLC16A1P53985 500 aa4.34□□□□□ -1.71
CDR2-203ENST00000563573 MTTPP55157 894 aa4.34□□□□□ -1.71
CDR2-203ENST00000563573 TAS2R50P59544 299 aa4.34□□□□□ -1.71
CDR2-203ENST00000563573 RAB8AP61006 207 aa4.34□□□□□ -1.71
CDR2-203ENST00000563573 UFM1P61960 85 aa4.34□□□□□ -1.71
CDR2-203ENST00000563573 PPP1CAP62136 330 aa4.34□□□□□ -1.71
CDR2-203ENST00000563573 PIGFQ07326 219 aa4.34□□□□□ -1.71
CDR2-203ENST00000563573 ACTN3Q08043 901 aaPredicted RBP4.34□□□□□ -1.71
CDR2-203ENST00000563573 FOXM1Q08050 763 aa4.34□□□□□ -1.71
CDR2-203ENST00000563573 ZNF763Q0D2J5 394 aa4.34□□□□□ -1.71
CDR2-203ENST00000563573 BNIP1Q12981 228 aa4.34□□□□□ -1.71
CDR2-203ENST00000563573 BIKQ13323 160 aa4.34□□□□□ -1.71
CDR2-203ENST00000563573 FAM53BQ14153 422 aa4.34□□□□□ -1.71
CDR2-203ENST00000563573 TRIP6Q15654 476 aaKnown RBP4.34□□□□□ -1.71
CDR2-203ENST00000563573 MAPKAPK3Q16644 382 aa4.34□□□□□ -1.71
CDR2-203ENST00000563573 HKDC1Q2TB90 917 aa4.34□□□□□ -1.71
CDR2-203ENST00000563573 PGS1Q32NB8 556 aa4.34□□□□□ -1.71
CDR2-203ENST00000563573 LACTB2Q53H82 288 aaPredicted RBP4.34□□□□□ -1.71
CDR2-203ENST00000563573 CPTPQ5TA50 214 aa4.34□□□□□ -1.71
CDR2-203ENST00000563573 STPG1Q5TH74 334 aa4.34□□□□□ -1.71
CDR2-203ENST00000563573 C16orf89Q6UX73 402 aa4.34□□□□□ -1.71
CDR2-203ENST00000563573 RBM44Q6ZP01 1051 aaKnown RBP4.34□□□□□ -1.71
CDR2-203ENST00000563573 IKBIPQ70UQ0 350 aa4.34□□□□□ -1.71
CDR2-203ENST00000563573 COMMD6Q7Z4G1 85 aa4.34□□□□□ -1.71
CDR2-203ENST00000563573 ARHGAP22Q7Z5H3 698 aa4.34□□□□□ -1.71
CDR2-203ENST00000563573 GPR180Q86V85 440 aa4.34□□□□□ -1.71
CDR2-203ENST00000563573 OR4N4Q8N0Y3 316 aa4.34□□□□□ -1.71
CDR2-203ENST00000563573 ARHGAP24Q8N264 748 aa4.34□□□□□ -1.71
CDR2-203ENST00000563573 CSNK1A1LQ8N752 337 aa4.34□□□□□ -1.71
CDR2-203ENST00000563573 ACOT4Q8N9L9 421 aa4.34□□□□□ -1.71
CDR2-203ENST00000563573 IL17RDQ8NFM7 739 aa4.34□□□□□ -1.71
CDR2-203ENST00000563573 OR8K5Q8NH50 307 aa4.34□□□□□ -1.71
CDR2-203ENST00000563573 UTP15Q8TED0 518 aaKnown RBP4.34□□□□□ -1.71
CDR2-203ENST00000563573 C16orf78Q8WTQ4 265 aa4.34□□□□□ -1.71
CDR2-203ENST00000563573 SPDL1Q96EA4 605 aa4.34□□□□□ -1.71
CDR2-203ENST00000563573 PRR11Q96HE9 360 aaPredicted RBP4.34□□□□□ -1.71
CDR2-203ENST00000563573 FBXL20Q96IG2 436 aa4.34□□□□□ -1.71
CDR2-203ENST00000563573 ITCHQ96J02 903 aa4.34□□□□□ -1.71
CDR2-203ENST00000563573 FCRL1Q96LA6 429 aa4.34□□□□□ -1.71
CDR2-203ENST00000563573 PPM1MQ96MI6 270 aa4.34□□□□□ -1.71
CDR2-203ENST00000563573 FCRL4Q96PJ5 515 aa4.34□□□□□ -1.71
CDR2-203ENST00000563573 TSSK3Q96PN8 268 aa4.34□□□□□ -1.71
CDR2-203ENST00000563573 HOPXQ9BPY8 73 aaPredicted RBP4.34□□□□□ -1.71
CDR2-203ENST00000563573 MACROD1Q9BQ69 325 aa4.34□□□□□ -1.71
CDR2-203ENST00000563573 NUDT22Q9BRQ3 303 aa4.34□□□□□ -1.71
CDR2-203ENST00000563573 BTBD10Q9BSF8 475 aa4.34□□□□□ -1.71
CDR2-203ENST00000563573 RTKNQ9BST9 563 aa4.34□□□□□ -1.71
CDR2-203ENST00000563573 EBPLQ9BY08 206 aa4.34□□□□□ -1.71
CDR2-203ENST00000563573 STRADBQ9C0K7 418 aa4.34□□□□□ -1.71
CDR2-203ENST00000563573 C1orf21Q9H246 121 aa4.34□□□□□ -1.71
CDR2-203ENST00000563573 KLHL31Q9H511 634 aa4.34□□□□□ -1.71
CDR2-203ENST00000563573 REEP4Q9H6H4 257 aa4.34□□□□□ -1.71
CDR2-203ENST00000563573 DDX31Q9H8H2 851 aaKnown RBP4.34□□□□□ -1.71
CDR2-203ENST00000563573 ACTR5Q9H9F9 607 aaPredicted RBP4.34□□□□□ -1.71
CDR2-203ENST00000563573 FAM60AQ9NP50 221 aa4.34□□□□□ -1.71
CDR2-203ENST00000563573 MIEF1Q9NQG6 463 aa4.34□□□□□ -1.71
CDR2-203ENST00000563573 SDR39U1Q9NRG7 319 aaPredicted RBP4.34□□□□□ -1.71
CDR2-203ENST00000563573 STARD5Q9NSY2 213 aa4.34□□□□□ -1.71
CDR2-203ENST00000563573 ARL8BQ9NVJ2 186 aa4.34□□□□□ -1.71
CDR2-203ENST00000563573 LYARQ9NX58 379 aaKnown RBP4.34□□□□□ -1.71
CDR2-203ENST00000563573 SH3BP4Q9P0V3 963 aa4.34□□□□□ -1.71
CDR2-203ENST00000563573 SEMA5BQ9P283 1151 aa4.34□□□□□ -1.71
CDR2-203ENST00000563573 PDP2Q9P2J9 529 aa4.34□□□□□ -1.71
CDR2-203ENST00000563573 PHF11Q9UIL8 331 aa4.34□□□□□ -1.71
CDR2-203ENST00000563573 LEF1Q9UJU2 399 aaPredicted RBP4.34□□□□□ -1.71
CDR2-203ENST00000563573 FBXW2Q9UKT8 454 aa4.34□□□□□ -1.71
CDR2-203ENST00000563573 RARRES3Q9UL19 164 aa4.34□□□□□ -1.71
CDR2-203ENST00000563573 MRPS33Q9Y291 106 aaKnown RBP4.34□□□□□ -1.71
CDR2-203ENST00000563573 DLGAP4Q9Y2H0 992 aa4.34□□□□□ -1.71
CDR2-203ENST00000563573 SLC22A7Q9Y694 548 aa4.34□□□□□ -1.71
CDR2-203ENST00000563573 ZNF780BQ9Y6R6 833 aa4.34□□□□□ -1.71
CDR2-203ENST00000563573 MN1Q10571 1320 aaPredicted RBP4.34□□□□□ -1.71
CDR2-203ENST00000563573 SCN2AQ99250 2005 aa4.34□□□□□ -1.71
CDR2-203ENST00000563573 ASXL3Q9C0F0 2248 aa4.33□□□□□ -1.72
CDR2-203ENST00000563573 LY6G6EA0A0G2JKS1 128 aa4.33□□□□□ -1.72
CDR2-203ENST00000563573 A0A0G2JN53 185 aa4.33□□□□□ -1.72
CDR2-203ENST00000563573 LOC105378220A0A1B0GUY1 285 aaPredicted RBP4.33□□□□□ -1.72
CDR2-203ENST00000563573 PRSS51A0A1B0GVH4 220 aa4.33□□□□□ -1.72
CDR2-203ENST00000563573 A0A1W2PQM1 296 aa4.33□□□□□ -1.72
CDR2-203ENST00000563573 GABRR3A8MPY1 467 aa4.33□□□□□ -1.72
CDR2-203ENST00000563573 RTCAO00442 366 aaKnown RBP4.33□□□□□ -1.72
CDR2-203ENST00000563573 NR5A2O00482 541 aa4.33□□□□□ -1.72
CDR2-203ENST00000563573 NTN3O00634 580 aaPredicted RBP4.33□□□□□ -1.72
CDR2-203ENST00000563573 CLDN4O14493 209 aa4.33□□□□□ -1.72
CDR2-203ENST00000563573 AIM2O14862 343 aa4.33□□□□□ -1.72
CDR2-203ENST00000563573 POLR1CO15160 346 aaPredicted RBP4.33□□□□□ -1.72
CDR2-203ENST00000563573 EEDO75530 441 aaKnown RBP4.33□□□□□ -1.72
CDR2-203ENST00000563573 OR2B3O76000 313 aa4.33□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 100.5 ms