RNA–Protein interactions for RNA: ENST00000559556.5

TPM1-220, Transcript of tropomyosin 1, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene TPM1, Length 977 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-220ENST00000559556 ZNF681Q96N22 645 aa11.88□□□□□ -0.51
TPM1-220ENST00000559556 COL21A1Q96P44 957 aa11.88□□□□□ -0.51
TPM1-220ENST00000559556 SMR3AQ99954 134 aa11.88□□□□□ -0.51
TPM1-220ENST00000559556 C1QTNF3Q9BXJ4 246 aa11.88□□□□□ -0.51
TPM1-220ENST00000559556 ZDHHC18Q9NUE0 388 aa11.88□□□□□ -0.51
TPM1-220ENST00000559556 PRODH2Q9UF12 536 aa11.88□□□□□ -0.51
TPM1-220ENST00000559556 PSME2Q9UL46 239 aa11.88□□□□□ -0.51
TPM1-220ENST00000559556 DLGAP4Q9Y2H0 992 aa11.88□□□□□ -0.51
TPM1-220ENST00000559556 GPR55Q9Y2T6 319 aaPredicted RBP11.88□□□□□ -0.51
TPM1-220ENST00000559556 MRPS18CQ9Y3D5 142 aaKnown RBP11.88□□□□□ -0.51
TPM1-220ENST00000559556 TESMINQ9Y4I5 508 aa11.88□□□□□ -0.51
TPM1-220ENST00000559556 FBN1P35555 2871 aaKnown RBP11.87□□□□□ -0.51
TPM1-220ENST00000559556 TNFSF12-TNFSF13A0A0A6YY99 330 aa11.87□□□□□ -0.51
TPM1-220ENST00000559556 ESYT3A0FGR9 886 aa11.87□□□□□ -0.51
TPM1-220ENST00000559556 A8MXE2 369 aa11.87□□□□□ -0.51
TPM1-220ENST00000559556 TSPAN2O60636 221 aa11.87□□□□□ -0.51
TPM1-220ENST00000559556 SMIM24O75264 130 aa11.87□□□□□ -0.51
TPM1-220ENST00000559556 TNFSF13O75888 250 aa11.87□□□□□ -0.51
TPM1-220ENST00000559556 OTCP00480 354 aa11.87□□□□□ -0.51
TPM1-220ENST00000559556 INHBBP09529 407 aa11.87□□□□□ -0.51
TPM1-220ENST00000559556 PCSK2P16519 638 aa11.87□□□□□ -0.51
TPM1-220ENST00000559556 ZNF708P17019 499 aa11.87□□□□□ -0.51
TPM1-220ENST00000559556 DIO3P55073 304 aa11.87□□□□□ -0.51
TPM1-220ENST00000559556 TRA2BP62995 288 aaKnown RBP11.87□□□□□ -0.51
TPM1-220ENST00000559556 EEF1A1P68104 462 aaKnown RBP11.87□□□□□ -0.51
TPM1-220ENST00000559556 SRYQ05066 204 aa11.87□□□□□ -0.51
TPM1-220ENST00000559556 ZNF628Q5EBL2 1059 aa11.87□□□□□ -0.51
TPM1-220ENST00000559556 SGO1Q5FBB7 561 aa11.87□□□□□ -0.51
TPM1-220ENST00000559556 UBAP2Q5T6F2 1119 aaKnown RBP11.87□□□□□ -0.51
TPM1-220ENST00000559556 EEF1A1P5Q5VTE0 462 aa11.87□□□□□ -0.51
TPM1-220ENST00000559556 SHEQ5VZ18 495 aa11.87□□□□□ -0.51
TPM1-220ENST00000559556 AAGABQ6PD74 315 aa11.87□□□□□ -0.51
TPM1-220ENST00000559556 RPS27LQ71UM5 84 aaKnown RBP11.87□□□□□ -0.51
TPM1-220ENST00000559556 MILR1Q7Z6M3 343 aa11.87□□□□□ -0.51
TPM1-220ENST00000559556 C1orf52Q8N6N3 182 aaKnown RBP11.87□□□□□ -0.51
TPM1-220ENST00000559556 RDH11Q8TC12 318 aa11.87□□□□□ -0.51
TPM1-220ENST00000559556 ZNF483Q8TF39 744 aaPredicted RBP11.87□□□□□ -0.51
TPM1-220ENST00000559556 TMBIM1Q969X1 311 aa11.87□□□□□ -0.51
TPM1-220ENST00000559556 TMCO6Q96DC7 493 aa11.87□□□□□ -0.51
TPM1-220ENST00000559556 ERP27Q96DN0 273 aa11.87□□□□□ -0.51
TPM1-220ENST00000559556 FUT8Q9BYC5 575 aa11.87□□□□□ -0.51
TPM1-220ENST00000559556 TAS2R10Q9NYW0 307 aa11.87□□□□□ -0.51
TPM1-220ENST00000559556 NINJ2Q9NZG7 142 aa11.87□□□□□ -0.51
TPM1-220ENST00000559556 FBXL2Q9UKC9 423 aa11.87□□□□□ -0.51
TPM1-220ENST00000559556 PACSIN3Q9UKS6 424 aa11.87□□□□□ -0.51
TPM1-220ENST00000559556 SNX6Q9UNH7 406 aa11.87□□□□□ -0.51
TPM1-220ENST00000559556 ZNF780BQ9Y6R6 833 aa11.87□□□□□ -0.51
TPM1-220ENST00000559556 A0A1W2PNV4 684 aa11.86□□□□□ -0.51
TPM1-220ENST00000559556 B4DXG7 233 aa11.86□□□□□ -0.51
TPM1-220ENST00000559556 MSTNO14793 375 aa11.86□□□□□ -0.51
TPM1-220ENST00000559556 BCAS2O75934 225 aaPredicted RBP11.86□□□□□ -0.51
TPM1-220ENST00000559556 CRHP06850 196 aa11.86□□□□□ -0.51
TPM1-220ENST00000559556 CT45A8P0DMV1 189 aa11.86□□□□□ -0.51
TPM1-220ENST00000559556 CT45A9P0DMV2 189 aa11.86□□□□□ -0.51
TPM1-220ENST00000559556 COL6A2P12110 1019 aa11.86□□□□□ -0.51
TPM1-220ENST00000559556 HSD3B1P14060 373 aa11.86□□□□□ -0.51
TPM1-220ENST00000559556 HSD3B2P26439 372 aa11.86□□□□□ -0.51
TPM1-220ENST00000559556 ADSLP30566 484 aaPredicted RBP11.86□□□□□ -0.51
TPM1-220ENST00000559556 ALDH9A1P49189 494 aa11.86□□□□□ -0.51
TPM1-220ENST00000559556 PSPHP78330 225 aa11.86□□□□□ -0.51
TPM1-220ENST00000559556 NKX6-1P78426 367 aaPredicted RBP11.86□□□□□ -0.51
TPM1-220ENST00000559556 CT45A2Q5DJT8 189 aa11.86□□□□□ -0.51
TPM1-220ENST00000559556 FAM180BQ6P0A1 224 aa11.86□□□□□ -0.51
TPM1-220ENST00000559556 GRAMD2AQ8IUY3 354 aa11.86□□□□□ -0.51
TPM1-220ENST00000559556 SELENOMQ8WWX9 145 aa11.86□□□□□ -0.51
TPM1-220ENST00000559556 VSTM2LQ96N03 204 aa11.86□□□□□ -0.51
TPM1-220ENST00000559556 MRPL57Q9BQC6 102 aaKnown RBP11.86□□□□□ -0.51
TPM1-220ENST00000559556 FAIM2Q9BWQ8 316 aa11.86□□□□□ -0.51
TPM1-220ENST00000559556 NMRK1Q9NWW6 199 aa11.86□□□□□ -0.51
TPM1-220ENST00000559556 HEY2Q9UBP5 337 aa11.86□□□□□ -0.51
TPM1-220ENST00000559556 NDRG3Q9UGV2 375 aa11.86□□□□□ -0.51
TPM1-220ENST00000559556 TRPS1Q9UHF7 1281 aa11.86□□□□□ -0.51
TPM1-220ENST00000559556 ZNF225Q9UK10 706 aa11.86□□□□□ -0.51
TPM1-220ENST00000559556 UTS2RQ9UKP6 389 aa11.86□□□□□ -0.51
TPM1-220ENST00000559556 EIF3LQ9Y262 564 aaKnown RBP11.86□□□□□ -0.51
TPM1-220ENST00000559556 ALPK2Q86TB3 2170 aa11.85□□□□□ -0.51
TPM1-220ENST00000559556 A8MT66 165 aa11.85□□□□□ -0.51
TPM1-220ENST00000559556 PPP6CO00743 305 aa11.85□□□□□ -0.51
TPM1-220ENST00000559556 SIAH2O43255 324 aa11.85□□□□□ -0.51
TPM1-220ENST00000559556 ZIC3O60481 467 aa11.85□□□□□ -0.51
TPM1-220ENST00000559556 REM1O75628 298 aa11.85□□□□□ -0.51
TPM1-220ENST00000559556 TGM6O95932 706 aa11.85□□□□□ -0.51
TPM1-220ENST00000559556 HEXAP06865 529 aa11.85□□□□□ -0.51
TPM1-220ENST00000559556 INHBAP08476 426 aa11.85□□□□□ -0.51
TPM1-220ENST00000559556 SBK3P0C264 359 aa11.85□□□□□ -0.51
TPM1-220ENST00000559556 GRK2P25098 689 aa11.85□□□□□ -0.51
TPM1-220ENST00000559556 CPOXP36551 454 aa11.85□□□□□ -0.51
TPM1-220ENST00000559556 STARP49675 285 aa11.85□□□□□ -0.51
TPM1-220ENST00000559556 SERPINB9P50453 376 aa11.85□□□□□ -0.51
TPM1-220ENST00000559556 GAS1P54826 345 aa11.85□□□□□ -0.51
TPM1-220ENST00000559556 CORO7P57737 925 aa11.85□□□□□ -0.51
TPM1-220ENST00000559556 B3GALT5-AS1P59052 145 aa11.85□□□□□ -0.51
TPM1-220ENST00000559556 CSTF3Q12996 717 aaKnown RBP11.85□□□□□ -0.51
TPM1-220ENST00000559556 EFR3AQ14156 821 aa11.85□□□□□ -0.51
TPM1-220ENST00000559556 BCL2A1Q16548 175 aa11.85□□□□□ -0.51
TPM1-220ENST00000559556 FAM219BQ5XKK7 198 aa11.85□□□□□ -0.51
TPM1-220ENST00000559556 OR2A2Q6IF42 318 aa11.85□□□□□ -0.51
TPM1-220ENST00000559556 NPSR1Q6W5P4 371 aa11.85□□□□□ -0.51
TPM1-220ENST00000559556 RELL1Q8IUW5 271 aa11.85□□□□□ -0.51
TPM1-220ENST00000559556 LRRC75A-AS1Q8N1F1 130 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms