RNA–Protein interactions for RNA: ENST00000557703.5

SHMT2-234, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 542 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-234ENST00000557703 OR10H1Q9Y4A9 318 aa12.62□□□□□ -0.39
SHMT2-234ENST00000557703 SNX8Q9Y5X2 465 aa12.62□□□□□ -0.39
SHMT2-234ENST00000557703 COPG1Q9Y678 874 aaKnown RBP12.62□□□□□ -0.39
SHMT2-234ENST00000557703 GIMAP1-GIMAP5A0A087WTJ2 511 aa12.61□□□□□ -0.39
SHMT2-234ENST00000557703 GMNCA6NCL1 334 aa12.61□□□□□ -0.39
SHMT2-234ENST00000557703 ASNA1O43681 348 aa12.61□□□□□ -0.39
SHMT2-234ENST00000557703 C1QL1O75973 258 aa12.61□□□□□ -0.39
SHMT2-234ENST00000557703 HMGN2P05204 90 aaKnown RBP12.61□□□□□ -0.39
SHMT2-234ENST00000557703 ABCB1P08183 1280 aaPredicted RBP12.61□□□□□ -0.39
SHMT2-234ENST00000557703 ALOX5P09917 674 aa12.61□□□□□ -0.39
SHMT2-234ENST00000557703 NCF2P19878 526 aaPredicted RBP12.61□□□□□ -0.39
SHMT2-234ENST00000557703 IL12AP29459 219 aa12.61□□□□□ -0.39
SHMT2-234ENST00000557703 LSP1P33241 339 aa12.61□□□□□ -0.39
SHMT2-234ENST00000557703 PIGAP37287 484 aa12.61□□□□□ -0.39
SHMT2-234ENST00000557703 CDK9P50750 372 aaKnown RBP12.61□□□□□ -0.39
SHMT2-234ENST00000557703 PHC1P78364 1004 aa12.61□□□□□ -0.39
SHMT2-234ENST00000557703 PLCXD2Q0VAA5 305 aa12.61□□□□□ -0.39
SHMT2-234ENST00000557703 KRTCAP3Q53RY4 240 aa12.61□□□□□ -0.39
SHMT2-234ENST00000557703 ZNF468Q5VIY5 522 aaPredicted RBP12.61□□□□□ -0.39
SHMT2-234ENST00000557703 AP1ARQ63HQ0 302 aa12.61□□□□□ -0.39
SHMT2-234ENST00000557703 CDC73Q6P1J9 531 aa12.61□□□□□ -0.39
SHMT2-234ENST00000557703 FAM180AQ6UWF9 173 aa12.61□□□□□ -0.39
SHMT2-234ENST00000557703 ZNF227Q86WZ6 799 aa12.61□□□□□ -0.39
SHMT2-234ENST00000557703 SLC44A2Q8IWA5 706 aaPredicted RBP12.61□□□□□ -0.39
SHMT2-234ENST00000557703 OR4A15Q8NGL6 344 aa12.61□□□□□ -0.39
SHMT2-234ENST00000557703 RFWD2Q8NHY2 731 aa12.61□□□□□ -0.39
SHMT2-234ENST00000557703 DIO2Q92813 273 aa12.61□□□□□ -0.39
SHMT2-234ENST00000557703 GIMAP5Q96F15 307 aa12.61□□□□□ -0.39
SHMT2-234ENST00000557703 COL21A1Q96P44 957 aa12.61□□□□□ -0.39
SHMT2-234ENST00000557703 PANX1Q96RD7 426 aa12.61□□□□□ -0.39
SHMT2-234ENST00000557703 TMEM120AQ9BXJ8 343 aa12.61□□□□□ -0.39
SHMT2-234ENST00000557703 MFRPQ9BY79 579 aa12.61□□□□□ -0.39
SHMT2-234ENST00000557703 PIGUQ9H490 435 aa12.61□□□□□ -0.39
SHMT2-234ENST00000557703 CXorf36Q9H7Y0 433 aa12.61□□□□□ -0.39
SHMT2-234ENST00000557703 LIN28AQ9H9Z2 209 aaKnown RBP12.61□□□□□ -0.39
SHMT2-234ENST00000557703 FAM53CQ9NYF3 392 aa12.61□□□□□ -0.39
SHMT2-234ENST00000557703 CBLCQ9ULV8 474 aa12.61□□□□□ -0.39
SHMT2-234ENST00000557703 VPS4AQ9UN37 437 aa12.61□□□□□ -0.39
SHMT2-234ENST00000557703 DTX4Q9Y2E6 619 aa12.61□□□□□ -0.39
SHMT2-234ENST00000557703 CHCHD2Q9Y6H1 151 aaPredicted RBP12.61□□□□□ -0.39
SHMT2-234ENST00000557703 POLEQ07864 2286 aa12.6□□□□□ -0.39
SHMT2-234ENST00000557703 CCDC154A6NI56 674 aa12.6□□□□□ -0.39
SHMT2-234ENST00000557703 RFXANKO14593 260 aa12.6□□□□□ -0.39
SHMT2-234ENST00000557703 HS6ST1O60243 411 aa12.6□□□□□ -0.39
SHMT2-234ENST00000557703 CCDC22O60826 627 aa12.6□□□□□ -0.39
SHMT2-234ENST00000557703 KRT75O95678 551 aa12.6□□□□□ -0.39
SHMT2-234ENST00000557703 IL12BP29460 328 aa12.6□□□□□ -0.39
SHMT2-234ENST00000557703 PRKAG1P54619 331 aa12.6□□□□□ -0.39
SHMT2-234ENST00000557703 MAPRE2Q15555 327 aa12.6□□□□□ -0.39
SHMT2-234ENST00000557703 INPP5JQ15735 1006 aaPredicted RBP12.6□□□□□ -0.39
SHMT2-234ENST00000557703 CPEB4Q17RY0 729 aaKnown RBP eCLIP12.6□□□□□ -0.39
SHMT2-234ENST00000557703 HYAL4Q2M3T9 481 aa12.6□□□□□ -0.39
SHMT2-234ENST00000557703 SLC30A6Q6NXT4 461 aa12.6□□□□□ -0.39
SHMT2-234ENST00000557703 PAOXQ6QHF9 649 aa12.6□□□□□ -0.39
SHMT2-234ENST00000557703 GALNTL5Q7Z4T8 443 aa12.6□□□□□ -0.39
SHMT2-234ENST00000557703 CPLX4Q7Z7G2 160 aa12.6□□□□□ -0.39
SHMT2-234ENST00000557703 ZNF605Q86T29 641 aa12.6□□□□□ -0.39
SHMT2-234ENST00000557703 ZFP62Q8NB50 900 aaPredicted RBP12.6□□□□□ -0.39
SHMT2-234ENST00000557703 CPT1CQ8TCG5 803 aa12.6□□□□□ -0.39
SHMT2-234ENST00000557703 SPPL2AQ8TCT8 520 aa12.6□□□□□ -0.39
SHMT2-234ENST00000557703 ADAMTS15Q8TE58 950 aa12.6□□□□□ -0.39
SHMT2-234ENST00000557703 DOK4Q8TEW6 326 aa12.6□□□□□ -0.39
SHMT2-234ENST00000557703 FAR1Q8WVX9 515 aa12.6□□□□□ -0.39
SHMT2-234ENST00000557703 PMM1Q92871 262 aa12.6□□□□□ -0.39
SHMT2-234ENST00000557703 OMA1Q96E52 524 aa12.6□□□□□ -0.39
SHMT2-234ENST00000557703 SPDL1Q96EA4 605 aa12.6□□□□□ -0.39
SHMT2-234ENST00000557703 NEURL3Q96EH8 262 aa12.6□□□□□ -0.39
SHMT2-234ENST00000557703 RAD21L1Q9H4I0 556 aa12.6□□□□□ -0.39
SHMT2-234ENST00000557703 ZNF385DQ9H6B1 395 aa12.6□□□□□ -0.39
SHMT2-234ENST00000557703 GPATCH2Q9NW75 528 aa12.6□□□□□ -0.39
SHMT2-234ENST00000557703 ANKRD10Q9NXR5 420 aa12.6□□□□□ -0.39
SHMT2-234ENST00000557703 QPCTLQ9NXS2 382 aa12.6□□□□□ -0.39
SHMT2-234ENST00000557703 ABCG2Q9UNQ0 655 aa12.6□□□□□ -0.39
SHMT2-234ENST00000557703 CSAG2Q9Y5P2 127 aa12.6□□□□□ -0.39
SHMT2-234ENST00000557703 GMEB1Q9Y692 573 aa12.6□□□□□ -0.39
SHMT2-234ENST00000557703 A0A1W2PP18 115 aa12.59□□□□□ -0.39
SHMT2-234ENST00000557703 PEX1O43933 1283 aa12.59□□□□□ -0.39
SHMT2-234ENST00000557703 TSPAN2O60636 221 aa12.59□□□□□ -0.39
SHMT2-234ENST00000557703 ZNF354AO60765 605 aaPredicted RBP12.59□□□□□ -0.39
SHMT2-234ENST00000557703 REM1O75628 298 aa12.59□□□□□ -0.39
SHMT2-234ENST00000557703 IL33O95760 270 aa12.59□□□□□ -0.39
SHMT2-234ENST00000557703 NPPAP01160 153 aa12.59□□□□□ -0.39
SHMT2-234ENST00000557703 NGFRP08138 427 aa12.59□□□□□ -0.39
SHMT2-234ENST00000557703 ENDOUP21128 410 aaKnown RBP12.59□□□□□ -0.39
SHMT2-234ENST00000557703 PPIBP23284 216 aaKnown RBP12.59□□□□□ -0.39
SHMT2-234ENST00000557703 ELAVL4P26378 380 aaKnown RBP12.59□□□□□ -0.39
SHMT2-234ENST00000557703 ZFP36L2P47974 494 aaKnown RBP12.59□□□□□ -0.39
SHMT2-234ENST00000557703 CLK3P49761 638 aaKnown RBP12.59□□□□□ -0.39
SHMT2-234ENST00000557703 NME5P56597 212 aa12.59□□□□□ -0.39
SHMT2-234ENST00000557703 GAB1Q13480 694 aa12.59□□□□□ -0.39
SHMT2-234ENST00000557703 COQ5Q5HYK3 327 aa12.59□□□□□ -0.39
SHMT2-234ENST00000557703 C16orf47Q6ZP98 133 aaPredicted RBP12.59□□□□□ -0.39
SHMT2-234ENST00000557703 SZRD1Q7Z422 152 aa12.59□□□□□ -0.39
SHMT2-234ENST00000557703 C6orf120Q7Z4R8 191 aa12.59□□□□□ -0.39
SHMT2-234ENST00000557703 MDGA2Q7Z553 956 aa12.59□□□□□ -0.39
SHMT2-234ENST00000557703 PACS2Q86VP3 889 aa12.59□□□□□ -0.39
SHMT2-234ENST00000557703 AMER2Q8N7J2 671 aa12.59□□□□□ -0.39
SHMT2-234ENST00000557703 SIMC1Q8NDZ2 872 aa12.59□□□□□ -0.39
SHMT2-234ENST00000557703 FAM13CQ8NE31 585 aa12.59□□□□□ -0.39
SHMT2-234ENST00000557703 FAM110BQ8TC76 370 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms