RNA–Protein interactions for RNA: ENST00000554486.1

SCFD1-212, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 819 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-212ENST00000554486 ETAA1Q9NY74 926 aa5.91□□□□□ -1.46
SCFD1-212ENST00000554486 AHSPQ9NZD4 102 aa5.91□□□□□ -1.46
SCFD1-212ENST00000554486 AKAP7Q9P0M2 348 aaPredicted RBP5.91□□□□□ -1.46
SCFD1-212ENST00000554486 DHCR7Q9UBM7 475 aaKnown RBP5.91□□□□□ -1.46
SCFD1-212ENST00000554486 HEY2Q9UBP5 337 aa5.91□□□□□ -1.46
SCFD1-212ENST00000554486 PISDQ9UG56 409 aa5.91□□□□□ -1.46
SCFD1-212ENST00000554486 BAIAP2L1Q9UHR4 511 aa5.91□□□□□ -1.46
SCFD1-212ENST00000554486 EXO1Q9UQ84 846 aaKnown RBP5.91□□□□□ -1.46
SCFD1-212ENST00000554486 ARL2BPQ9Y2Y0 163 aa5.91□□□□□ -1.46
SCFD1-212ENST00000554486 TMED5Q9Y3A6 229 aa5.91□□□□□ -1.46
SCFD1-212ENST00000554486 NAALAD2Q9Y3Q0 740 aa5.91□□□□□ -1.46
SCFD1-212ENST00000554486 POLR3HQ9Y535 204 aaPredicted RBP5.91□□□□□ -1.46
SCFD1-212ENST00000554486 ASB4Q9Y574 426 aa5.91□□□□□ -1.46
SCFD1-212ENST00000554486 FCHO1O14526 889 aa5.9□□□□□ -1.46
SCFD1-212ENST00000554486 ANKRD28O15084 1053 aa5.9□□□□□ -1.46
SCFD1-212ENST00000554486 POLR1CO15160 346 aaPredicted RBP5.9□□□□□ -1.46
SCFD1-212ENST00000554486 UBDO15205 165 aa5.9□□□□□ -1.46
SCFD1-212ENST00000554486 RDH16O75452 317 aa5.9□□□□□ -1.46
SCFD1-212ENST00000554486 SCRG1O75711 98 aa5.9□□□□□ -1.46
SCFD1-212ENST00000554486 MYO1DO94832 1006 aa5.9□□□□□ -1.46
SCFD1-212ENST00000554486 NSA2O95478 260 aaKnown RBP5.9□□□□□ -1.46
SCFD1-212ENST00000554486 ABHD16AO95870 558 aa5.9□□□□□ -1.46
SCFD1-212ENST00000554486 ANXA4P09525 319 aaPredicted RBP5.9□□□□□ -1.46
SCFD1-212ENST00000554486 FAM58BPP0C7Q3 252 aa5.9□□□□□ -1.46
SCFD1-212ENST00000554486 PRPS2P11908 318 aa5.9□□□□□ -1.46
SCFD1-212ENST00000554486 CD1EP15812 388 aa5.9□□□□□ -1.46
SCFD1-212ENST00000554486 NCF2P19878 526 aaPredicted RBP5.9□□□□□ -1.46
SCFD1-212ENST00000554486 GPX3P22352 226 aa5.9□□□□□ -1.46
SCFD1-212ENST00000554486 IL12AP29459 219 aa5.9□□□□□ -1.46
SCFD1-212ENST00000554486 RORAP35398 523 aa5.9□□□□□ -1.46
SCFD1-212ENST00000554486 TSFMP43897 325 aaKnown RBP5.9□□□□□ -1.46
SCFD1-212ENST00000554486 MRPL19P49406 292 aaKnown RBP5.9□□□□□ -1.46
SCFD1-212ENST00000554486 ATP4BP51164 291 aa5.9□□□□□ -1.46
SCFD1-212ENST00000554486 MAPK10P53779 464 aa5.9□□□□□ -1.46
SCFD1-212ENST00000554486 ARSFP54793 590 aa5.9□□□□□ -1.46
SCFD1-212ENST00000554486 MTTPP55157 894 aa5.9□□□□□ -1.46
SCFD1-212ENST00000554486 HNRNPH2P55795 449 aaKnown RBP5.9□□□□□ -1.46
SCFD1-212ENST00000554486 OLR1P78380 273 aa5.9□□□□□ -1.46
SCFD1-212ENST00000554486 SLAMF1Q13291 335 aa5.9□□□□□ -1.46
SCFD1-212ENST00000554486 EIF3IQ13347 325 aaKnown RBP5.9□□□□□ -1.46
SCFD1-212ENST00000554486 TUBA3CQ13748 450 aa5.9□□□□□ -1.46
SCFD1-212ENST00000554486 GSTA3Q16772 222 aa5.9□□□□□ -1.46
SCFD1-212ENST00000554486 BEAN1Q3B7T3 259 aa5.9□□□□□ -1.46
SCFD1-212ENST00000554486 C3orf38Q5JPI3 329 aa5.9□□□□□ -1.46
SCFD1-212ENST00000554486 CCNYL2Q5T2Q4 361 aa5.9□□□□□ -1.46
SCFD1-212ENST00000554486 GKAP1Q5VSY0 366 aaPredicted RBP5.9□□□□□ -1.46
SCFD1-212ENST00000554486 FNDC7Q5VTL7 733 aa5.9□□□□□ -1.46
SCFD1-212ENST00000554486 C1orf189Q5VU69 101 aa5.9□□□□□ -1.46
SCFD1-212ENST00000554486 METTL21CQ5VZV1 264 aa5.9□□□□□ -1.46
SCFD1-212ENST00000554486 FAM71E1Q6IPT2 247 aa5.9□□□□□ -1.46
SCFD1-212ENST00000554486 RHBDD2Q6NTF9 364 aa5.9□□□□□ -1.46
SCFD1-212ENST00000554486 TUBA3EQ6PEY2 450 aa5.9□□□□□ -1.46
SCFD1-212ENST00000554486 CYP20A1Q6UW02 462 aa5.9□□□□□ -1.46
SCFD1-212ENST00000554486 COX15Q7KZN9 410 aa5.9□□□□□ -1.46
SCFD1-212ENST00000554486 PAGE2Q7Z2X7 111 aa5.9□□□□□ -1.46
SCFD1-212ENST00000554486 NUDT13Q86X67 352 aa5.9□□□□□ -1.46
SCFD1-212ENST00000554486 TMEM126BQ8IUX1 230 aa5.9□□□□□ -1.46
SCFD1-212ENST00000554486 MMP21Q8N119 569 aa5.9□□□□□ -1.46
SCFD1-212ENST00000554486 CA13Q8N1Q1 262 aa5.9□□□□□ -1.46
SCFD1-212ENST00000554486 GALNT15Q8N3T1 639 aa5.9□□□□□ -1.46
SCFD1-212ENST00000554486 TMEM132CQ8N3T6 1108 aa5.9□□□□□ -1.46
SCFD1-212ENST00000554486 CPSF7Q8N684 471 aaKnown RBP5.9□□□□□ -1.46
SCFD1-212ENST00000554486 METTL27Q8N6F8 245 aaPredicted RBP5.9□□□□□ -1.46
SCFD1-212ENST00000554486 CCDC197Q8NCU1 140 aa5.9□□□□□ -1.46
SCFD1-212ENST00000554486 OR5T3Q8NGG3 340 aa5.9□□□□□ -1.46
SCFD1-212ENST00000554486 CLHC1Q8NHS4 586 aa5.9□□□□□ -1.46
SCFD1-212ENST00000554486 WDR36Q8NI36 951 aaKnown RBP5.9□□□□□ -1.46
SCFD1-212ENST00000554486 C16orf78Q8WTQ4 265 aa5.9□□□□□ -1.46
SCFD1-212ENST00000554486 TM4SF18Q96CE8 201 aa5.9□□□□□ -1.46
SCFD1-212ENST00000554486 FAM122AQ96E09 287 aa5.9□□□□□ -1.46
SCFD1-212ENST00000554486 TEX37Q96LM6 180 aa5.9□□□□□ -1.46
SCFD1-212ENST00000554486 TSSK3Q96PN8 268 aa5.9□□□□□ -1.46
SCFD1-212ENST00000554486 GBP5Q96PP8 586 aa5.9□□□□□ -1.46
SCFD1-212ENST00000554486 SERINC2Q96SA4 455 aa5.9□□□□□ -1.46
SCFD1-212ENST00000554486 MAPKAP1Q9BPZ7 522 aa5.9□□□□□ -1.46
SCFD1-212ENST00000554486 DDA1Q9BW61 102 aa5.9□□□□□ -1.46
SCFD1-212ENST00000554486 SPRY4Q9C004 299 aa5.9□□□□□ -1.46
SCFD1-212ENST00000554486 ROGDIQ9GZN7 287 aa5.9□□□□□ -1.46
SCFD1-212ENST00000554486 NMUR2Q9GZQ4 415 aa5.9□□□□□ -1.46
SCFD1-212ENST00000554486 MYLK2Q9H1R3 596 aa5.9□□□□□ -1.46
SCFD1-212ENST00000554486 ACTL8Q9H568 366 aa5.9□□□□□ -1.46
SCFD1-212ENST00000554486 ACTR5Q9H9F9 607 aaPredicted RBP5.9□□□□□ -1.46
SCFD1-212ENST00000554486 COPS7BQ9H9Q2 264 aaPredicted RBP5.9□□□□□ -1.46
SCFD1-212ENST00000554486 ANKHQ9HCJ1 492 aa5.9□□□□□ -1.46
SCFD1-212ENST00000554486 LYRM4Q9HD34 91 aa5.9□□□□□ -1.46
SCFD1-212ENST00000554486 MYNNQ9NPC7 610 aa5.9□□□□□ -1.46
SCFD1-212ENST00000554486 AKIP1Q9NQ31 210 aa5.9□□□□□ -1.46
SCFD1-212ENST00000554486 SDR39U1Q9NRG7 319 aaPredicted RBP5.9□□□□□ -1.46
SCFD1-212ENST00000554486 SLC22A11Q9NSA0 550 aa5.9□□□□□ -1.46
SCFD1-212ENST00000554486 TEX10Q9NXF1 929 aaPredicted RBP5.9□□□□□ -1.46
SCFD1-212ENST00000554486 SATB2Q9UPW6 733 aa5.9□□□□□ -1.46
SCFD1-212ENST00000554486 EIF3LQ9Y262 564 aaKnown RBP5.9□□□□□ -1.46
SCFD1-212ENST00000554486 ATG4BQ9Y4P1 393 aa5.9□□□□□ -1.46
SCFD1-212ENST00000554486 COPG1Q9Y678 874 aaKnown RBP5.9□□□□□ -1.46
SCFD1-212ENST00000554486 NUP210LQ5VU65 1888 aa5.9□□□□□ -1.47
SCFD1-212ENST00000554486 A0A1B0GX78 115 aa5.89□□□□□ -1.47
SCFD1-212ENST00000554486 GNG14A0A1W2PPG7 69 aa5.89□□□□□ -1.47
SCFD1-212ENST00000554486 C9JVG2 144 aa5.89□□□□□ -1.47
SCFD1-212ENST00000554486 H0YIG0 161 aa5.89□□□□□ -1.47
SCFD1-212ENST00000554486 PGRMC2O15173 223 aa5.89□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms