RNA–Protein interactions for RNA: ENST00000554409.1

LINC00640-201, long intergenic non-protein coding RNA 640, humanhuman

TSL 3 BASIC

Gene LINC00640, Length 498 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00640-201ENST00000554409 ZWINTO95229 277 aa6.89□□□□□ -1.31
LINC00640-201ENST00000554409 LRATO95237 230 aa6.89□□□□□ -1.31
LINC00640-201ENST00000554409 JUNP05412 331 aaKnown RBP6.89□□□□□ -1.31
LINC00640-201ENST00000554409 HPNP05981 417 aa6.89□□□□□ -1.31
LINC00640-201ENST00000554409 CELA3AP09093 270 aa6.89□□□□□ -1.31
LINC00640-201ENST00000554409 RFPL3SP0C7P2 107 aa6.89□□□□□ -1.31
LINC00640-201ENST00000554409 LINC00032P0C843 101 aa6.89□□□□□ -1.31
LINC00640-201ENST00000554409 DHRS4L1P0CG22 281 aa6.89□□□□□ -1.31
LINC00640-201ENST00000554409 CT45A8P0DMV1 189 aa6.89□□□□□ -1.31
LINC00640-201ENST00000554409 CT45A9P0DMV2 189 aa6.89□□□□□ -1.31
LINC00640-201ENST00000554409 ENDOUP21128 410 aaKnown RBP6.89□□□□□ -1.31
LINC00640-201ENST00000554409 ELAVL4P26378 380 aaKnown RBP6.89□□□□□ -1.31
LINC00640-201ENST00000554409 COL8A1P27658 744 aa6.89□□□□□ -1.31
LINC00640-201ENST00000554409 PTGDSP41222 190 aa6.89□□□□□ -1.31
LINC00640-201ENST00000554409 ASMTP46597 345 aa6.89□□□□□ -1.31
LINC00640-201ENST00000554409 SERPINB4P48594 390 aa6.89□□□□□ -1.31
LINC00640-201ENST00000554409 MAN2A2P49641 1150 aa6.89□□□□□ -1.31
LINC00640-201ENST00000554409 NCBP2P52298 156 aaKnown RBP eCLIP6.89□□□□□ -1.31
LINC00640-201ENST00000554409 RPL38P63173 70 aaKnown RBP6.89□□□□□ -1.31
LINC00640-201ENST00000554409 PSG6Q00889 435 aa6.89□□□□□ -1.31
LINC00640-201ENST00000554409 NNATQ16517 81 aa6.89□□□□□ -1.31
LINC00640-201ENST00000554409 ZNF630Q2M218 657 aaPredicted RBP6.89□□□□□ -1.31
LINC00640-201ENST00000554409 GXYLT1Q4G148 440 aa6.89□□□□□ -1.31
LINC00640-201ENST00000554409 CT45A2Q5DJT8 189 aa6.89□□□□□ -1.31
LINC00640-201ENST00000554409 SH2D4BQ5SQS7 431 aa6.89□□□□□ -1.31
LINC00640-201ENST00000554409 TMEM211Q6ICI0 200 aa6.89□□□□□ -1.31
LINC00640-201ENST00000554409 SLC30A6Q6NXT4 461 aa6.89□□□□□ -1.31
LINC00640-201ENST00000554409 LRIG3Q6UXM1 1119 aa6.89□□□□□ -1.31
LINC00640-201ENST00000554409 NPSR1Q6W5P4 371 aa6.89□□□□□ -1.31
LINC00640-201ENST00000554409 EXOC3L1Q86VI1 746 aa6.89□□□□□ -1.31
LINC00640-201ENST00000554409 DDIASQ8IXT1 998 aa6.89□□□□□ -1.31
LINC00640-201ENST00000554409 PRR22Q8IZ63 422 aa6.89□□□□□ -1.31
LINC00640-201ENST00000554409 MARVELD2Q8N4S9 558 aa6.89□□□□□ -1.31
LINC00640-201ENST00000554409 CDC26Q8NHZ8 85 aa6.89□□□□□ -1.31
LINC00640-201ENST00000554409 NEIL3Q8TAT5 605 aa6.89□□□□□ -1.31
LINC00640-201ENST00000554409 RNF138Q8WVD3 245 aa6.89□□□□□ -1.31
LINC00640-201ENST00000554409 SARAFQ96BY9 339 aa6.89□□□□□ -1.31
LINC00640-201ENST00000554409 SLC35A4Q96G79 324 aa6.89□□□□□ -1.31
LINC00640-201ENST00000554409 PPP3R2Q96LZ3 170 aa6.89□□□□□ -1.31
LINC00640-201ENST00000554409 JSRP1Q96MG2 331 aaPredicted RBP6.89□□□□□ -1.31
LINC00640-201ENST00000554409 COL21A1Q96P44 957 aa6.89□□□□□ -1.31
LINC00640-201ENST00000554409 ZIM3Q96PE6 472 aa6.89□□□□□ -1.31
LINC00640-201ENST00000554409 NODALQ96S42 347 aa6.89□□□□□ -1.31
LINC00640-201ENST00000554409 UBQLN3Q9H347 655 aa6.89□□□□□ -1.31
LINC00640-201ENST00000554409 GLIPR2Q9H4G4 154 aa6.89□□□□□ -1.31
LINC00640-201ENST00000554409 REEP4Q9H6H4 257 aa6.89□□□□□ -1.31
LINC00640-201ENST00000554409 ANKRA2Q9H9E1 313 aa6.89□□□□□ -1.31
LINC00640-201ENST00000554409 FOLH1BQ9HBA9 442 aa6.89□□□□□ -1.31
LINC00640-201ENST00000554409 C15orf41Q9Y2V0 281 aa6.89□□□□□ -1.31
LINC00640-201ENST00000554409 ARHGAP21Q5T5U3 1957 aa6.89□□□□□ -1.31
LINC00640-201ENST00000554409 NINQ8N4C6 2090 aa6.89□□□□□ -1.31
LINC00640-201ENST00000554409 DNAJC13O75165 2243 aa6.88□□□□□ -1.31
LINC00640-201ENST00000554409 PRAMEF25A6NGN4 478 aa6.88□□□□□ -1.31
LINC00640-201ENST00000554409 TTC36A6NLP5 189 aa6.88□□□□□ -1.31
LINC00640-201ENST00000554409 FIGNL2A6NMB9 653 aa6.88□□□□□ -1.31
LINC00640-201ENST00000554409 PDPK1O15530 556 aa6.88□□□□□ -1.31
LINC00640-201ENST00000554409 TSPAN2O60636 221 aa6.88□□□□□ -1.31
LINC00640-201ENST00000554409 WDR1O75083 606 aa6.88□□□□□ -1.31
LINC00640-201ENST00000554409 ICOSLGO75144 302 aa6.88□□□□□ -1.31
LINC00640-201ENST00000554409 UGT2B11O75310 529 aa6.88□□□□□ -1.31
LINC00640-201ENST00000554409 CLDN14O95500 239 aa6.88□□□□□ -1.31
LINC00640-201ENST00000554409 SERPINE1P05121 402 aa6.88□□□□□ -1.31
LINC00640-201ENST00000554409 HOXD4P09016 255 aaPredicted RBP6.88□□□□□ -1.31
LINC00640-201ENST00000554409 MYZAPP0CAP1 466 aa6.88□□□□□ -1.31
LINC00640-201ENST00000554409 DDX5P17844 614 aaKnown RBP6.88□□□□□ -1.31
LINC00640-201ENST00000554409 GRK2P25098 689 aa6.88□□□□□ -1.31
LINC00640-201ENST00000554409 ACVR2AP27037 513 aa6.88□□□□□ -1.31
LINC00640-201ENST00000554409 GDF1P27539 372 aa6.88□□□□□ -1.31
LINC00640-201ENST00000554409 MAPK1P28482 360 aa6.88□□□□□ -1.31
LINC00640-201ENST00000554409 PTPN6P29350 595 aa6.88□□□□□ -1.31
LINC00640-201ENST00000554409 RPL3P39023 403 aaKnown RBP6.88□□□□□ -1.31
LINC00640-201ENST00000554409 MC3RP41968 323 aa6.88□□□□□ -1.31
LINC00640-201ENST00000554409 CDK9P50750 372 aaKnown RBP6.88□□□□□ -1.31
LINC00640-201ENST00000554409 PNLIPRP2P54317 469 aa6.88□□□□□ -1.31
LINC00640-201ENST00000554409 CORO7P57737 925 aa6.88□□□□□ -1.31
LINC00640-201ENST00000554409 ZNF155Q12901 538 aaPredicted RBP6.88□□□□□ -1.31
LINC00640-201ENST00000554409 EFR3AQ14156 821 aa6.88□□□□□ -1.31
LINC00640-201ENST00000554409 SMU1Q2TAY7 513 aa6.88□□□□□ -1.31
LINC00640-201ENST00000554409 GALNTL6Q49A17 601 aa6.88□□□□□ -1.31
LINC00640-201ENST00000554409 ATP6AP1LQ52LC2 224 aa6.88□□□□□ -1.31
LINC00640-201ENST00000554409 ZNF385BQ569K4 471 aa6.88□□□□□ -1.31
LINC00640-201ENST00000554409 NHSL2Q5HYW2 709 aa6.88□□□□□ -1.31
LINC00640-201ENST00000554409 CEP85LQ5SZL2 805 aa6.88□□□□□ -1.31
LINC00640-201ENST00000554409 WLSQ5T9L3 541 aa6.88□□□□□ -1.31
LINC00640-201ENST00000554409 CES4AQ5XG92 561 aa6.88□□□□□ -1.31
LINC00640-201ENST00000554409 BICRALQ6AI39 1079 aa6.88□□□□□ -1.31
LINC00640-201ENST00000554409 TIGD3Q6B0B8 471 aa6.88□□□□□ -1.31
LINC00640-201ENST00000554409 SP5Q6BEB4 398 aaPredicted RBP6.88□□□□□ -1.31
LINC00640-201ENST00000554409 TMEM107Q6UX40 140 aa6.88□□□□□ -1.31
LINC00640-201ENST00000554409 C3P1Q6ZMU1 363 aa6.88□□□□□ -1.31
LINC00640-201ENST00000554409 NCCRP1Q6ZVX7 275 aaPredicted RBP6.88□□□□□ -1.31
LINC00640-201ENST00000554409 ACAD11Q709F0 780 aa6.88□□□□□ -1.31
LINC00640-201ENST00000554409 R3HCC1LQ7Z5L2 792 aaKnown RBP6.88□□□□□ -1.31
LINC00640-201ENST00000554409 NUDCD3Q8IVD9 361 aa6.88□□□□□ -1.31
LINC00640-201ENST00000554409 KIRREL3Q8IZU9 778 aa6.88□□□□□ -1.31
LINC00640-201ENST00000554409 OR1J4Q8NGS1 313 aa6.88□□□□□ -1.31
LINC00640-201ENST00000554409 ZFP28Q8NHY6 868 aa6.88□□□□□ -1.31
LINC00640-201ENST00000554409 AGR3Q8TD06 166 aa6.88□□□□□ -1.31
LINC00640-201ENST00000554409 HOXB13Q92826 284 aaPredicted RBP6.88□□□□□ -1.31
LINC00640-201ENST00000554409 TMBIM1Q969X1 311 aa6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms