RNA–Protein interactions for RNA: ENST00000553868.1

SHMT2-208, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 941 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-208ENST00000553868 ASF1BQ9NVP2 202 aa13.47□□□□□ -0.25
SHMT2-208ENST00000553868 FAF1Q9UNN5 650 aaPredicted RBP13.47□□□□□ -0.25
SHMT2-208ENST00000553868 POLEQ07864 2286 aa13.46□□□□□ -0.25
SHMT2-208ENST00000553868 IGLV3-12A0A075B6K2 115 aa13.46□□□□□ -0.25
SHMT2-208ENST00000553868 ANKUB1A6NFN9 424 aa13.46□□□□□ -0.25
SHMT2-208ENST00000553868 ARPC2O15144 300 aa13.46□□□□□ -0.25
SHMT2-208ENST00000553868 MGRN1O60291 552 aa13.46□□□□□ -0.25
SHMT2-208ENST00000553868 COQ9O75208 318 aa13.46□□□□□ -0.25
SHMT2-208ENST00000553868 CDC123O75794 336 aaPredicted RBP13.46□□□□□ -0.25
SHMT2-208ENST00000553868 ALBP02768 609 aa13.46□□□□□ -0.25
SHMT2-208ENST00000553868 CYC1P08574 325 aa13.46□□□□□ -0.25
SHMT2-208ENST00000553868 BMP2P12643 396 aa13.46□□□□□ -0.25
SHMT2-208ENST00000553868 GGT1P19440 569 aa13.46□□□□□ -0.25
SHMT2-208ENST00000553868 MSX2P35548 267 aaPredicted RBP13.46□□□□□ -0.25
SHMT2-208ENST00000553868 MC3RP41968 323 aa13.46□□□□□ -0.25
SHMT2-208ENST00000553868 STT3AP46977 705 aa13.46□□□□□ -0.25
SHMT2-208ENST00000553868 GZMMP51124 257 aa13.46□□□□□ -0.25
SHMT2-208ENST00000553868 CCL11P51671 97 aa13.46□□□□□ -0.25
SHMT2-208ENST00000553868 OR4D2P58180 307 aa13.46□□□□□ -0.25
SHMT2-208ENST00000553868 DSTNP60981 165 aa13.46□□□□□ -0.25
SHMT2-208ENST00000553868 MS4A2Q01362 244 aa13.46□□□□□ -0.25
SHMT2-208ENST00000553868 DUSP2Q05923 314 aa13.46□□□□□ -0.25
SHMT2-208ENST00000553868 VEZF1Q14119 521 aa13.46□□□□□ -0.25
SHMT2-208ENST00000553868 ZNF630Q2M218 657 aaPredicted RBP13.46□□□□□ -0.25
SHMT2-208ENST00000553868 VMACQ2NL98 169 aa13.46□□□□□ -0.25
SHMT2-208ENST00000553868 MINDY4Q4G0A6 757 aa13.46□□□□□ -0.25
SHMT2-208ENST00000553868 DDX59Q5T1V6 619 aaKnown RBP eCLIP13.46□□□□□ -0.25
SHMT2-208ENST00000553868 INTS11Q5TA45 600 aaKnown RBP13.46□□□□□ -0.25
SHMT2-208ENST00000553868 GLYATQ6IB77 296 aa13.46□□□□□ -0.25
SHMT2-208ENST00000553868 AAGABQ6PD74 315 aa13.46□□□□□ -0.25
SHMT2-208ENST00000553868 SPATA24Q86W54 205 aa13.46□□□□□ -0.25
SHMT2-208ENST00000553868 RNF130Q86XS8 419 aa13.46□□□□□ -0.25
SHMT2-208ENST00000553868 ZC3H7AQ8IWR0 971 aaKnown RBP13.46□□□□□ -0.25
SHMT2-208ENST00000553868 CLEC4FQ8N1N0 589 aa13.46□□□□□ -0.25
SHMT2-208ENST00000553868 ESX1Q8N693 406 aa13.46□□□□□ -0.25
SHMT2-208ENST00000553868 NUP43Q8NFH3 380 aa13.46□□□□□ -0.25
SHMT2-208ENST00000553868 SNRNP40Q96DI7 357 aaKnown RBP13.46□□□□□ -0.25
SHMT2-208ENST00000553868 NSMCE2Q96MF7 247 aa13.46□□□□□ -0.25
SHMT2-208ENST00000553868 PTCHD1Q96NR3 888 aa13.46□□□□□ -0.25
SHMT2-208ENST00000553868 MS4A4EQ96PG1 132 aa13.46□□□□□ -0.25
SHMT2-208ENST00000553868 TMEM38AQ9H6F2 299 aa13.46□□□□□ -0.25
SHMT2-208ENST00000553868 LANCL2Q9NS86 450 aa13.46□□□□□ -0.25
SHMT2-208ENST00000553868 NTMQ9P121 344 aa13.46□□□□□ -0.25
SHMT2-208ENST00000553868 IFT80Q9P2H3 777 aaPredicted RBP13.46□□□□□ -0.25
SHMT2-208ENST00000553868 EGFL7Q9UHF1 273 aa13.46□□□□□ -0.25
SHMT2-208ENST00000553868 PKDREJQ9NTG1 2253 aa13.46□□□□□ -0.26
SHMT2-208ENST00000553868 MEN1O00255 615 aa13.45□□□□□ -0.26
SHMT2-208ENST00000553868 CXCR6O00574 342 aa13.45□□□□□ -0.26
SHMT2-208ENST00000553868 PLOD3O60568 738 aa13.45□□□□□ -0.26
SHMT2-208ENST00000553868 ENTPD5O75356 428 aa13.45□□□□□ -0.26
SHMT2-208ENST00000553868 SOX30O94993 753 aa13.45□□□□□ -0.26
SHMT2-208ENST00000553868 TIAF1O95411 115 aa13.45□□□□□ -0.26
SHMT2-208ENST00000553868 AGR2O95994 175 aa13.45□□□□□ -0.26
SHMT2-208ENST00000553868 IFNA16P05015 189 aa13.45□□□□□ -0.26
SHMT2-208ENST00000553868 CD63P08962 238 aa13.45□□□□□ -0.26
SHMT2-208ENST00000553868 HOXB6P17509 224 aaKnown RBP13.45□□□□□ -0.26
SHMT2-208ENST00000553868 PCGF2P35227 344 aa13.45□□□□□ -0.26
SHMT2-208ENST00000553868 RORAP35398 523 aa13.45□□□□□ -0.26
SHMT2-208ENST00000553868 MVDP53602 400 aa13.45□□□□□ -0.26
SHMT2-208ENST00000553868 PRKAG1P54619 331 aa13.45□□□□□ -0.26
SHMT2-208ENST00000553868 MAP4K2Q12851 820 aa13.45□□□□□ -0.26
SHMT2-208ENST00000553868 CCNIQ14094 377 aa13.45□□□□□ -0.26
SHMT2-208ENST00000553868 GNA13Q14344 377 aa13.45□□□□□ -0.26
SHMT2-208ENST00000553868 LTB4RQ15722 352 aa13.45□□□□□ -0.26
SHMT2-208ENST00000553868 ZNF628Q5EBL2 1059 aa13.45□□□□□ -0.26
SHMT2-208ENST00000553868 SLC6A19Q695T7 634 aa13.45□□□□□ -0.26
SHMT2-208ENST00000553868 ZFP1Q6P2D0 407 aa13.45□□□□□ -0.26
SHMT2-208ENST00000553868 OVCH1Q7RTY7 1134 aa13.45□□□□□ -0.26
SHMT2-208ENST00000553868 GALNT12Q8IXK2 581 aa13.45□□□□□ -0.26
SHMT2-208ENST00000553868 ZZZ3Q8IYH5 903 aa13.45□□□□□ -0.26
SHMT2-208ENST00000553868 OR2L13Q8N349 312 aa13.45□□□□□ -0.26
SHMT2-208ENST00000553868 VWA5B2Q8N398 1253 aa13.45□□□□□ -0.26
SHMT2-208ENST00000553868 METTL25Q8N6Q8 603 aa13.45□□□□□ -0.26
SHMT2-208ENST00000553868 HIPK4Q8NE63 616 aa13.45□□□□□ -0.26
SHMT2-208ENST00000553868 OR52E4Q8NGH9 312 aa13.45□□□□□ -0.26
SHMT2-208ENST00000553868 MIPOL1Q8TD10 442 aa13.45□□□□□ -0.26
SHMT2-208ENST00000553868 SLC26A7Q8TE54 656 aa13.45□□□□□ -0.26
SHMT2-208ENST00000553868 KAT2AQ92830 837 aa13.45□□□□□ -0.26
SHMT2-208ENST00000553868 RIT1Q92963 219 aa13.45□□□□□ -0.26
SHMT2-208ENST00000553868 NCLNQ969V3 563 aa13.45□□□□□ -0.26
SHMT2-208ENST00000553868 MAGED4Q96JG8 741 aa13.45□□□□□ -0.26
SHMT2-208ENST00000553868 ULBP3Q9BZM4 244 aa13.45□□□□□ -0.26
SHMT2-208ENST00000553868 GORASP2Q9H8Y8 452 aa13.45□□□□□ -0.26
SHMT2-208ENST00000553868 GPN3Q9UHW5 284 aaPredicted RBP13.45□□□□□ -0.26
SHMT2-208ENST00000553868 NXT1Q9UKK6 140 aaKnown RBP13.45□□□□□ -0.26
SHMT2-208ENST00000553868 C19orf53Q9UNZ5 99 aaPredicted RBP13.45□□□□□ -0.26
SHMT2-208ENST00000553868 ANGPT4Q9Y264 503 aa13.45□□□□□ -0.26
SHMT2-208ENST00000553868 ZNF451Q9Y4E5 1061 aa13.45□□□□□ -0.26
SHMT2-208ENST00000553868 SCN3AQ9NY46 2000 aa13.45□□□□□ -0.26
SHMT2-208ENST00000553868 ZNF469Q96JG9 3925 aaPredicted RBP13.45□□□□□ -0.26
SHMT2-208ENST00000553868 A0A1W2PS29 197 aa13.44□□□□□ -0.26
SHMT2-208ENST00000553868 DUXAA6NLW8 204 aa13.44□□□□□ -0.26
SHMT2-208ENST00000553868 C9J4A7 227 aa13.44□□□□□ -0.26
SHMT2-208ENST00000553868 ASNA1O43681 348 aa13.44□□□□□ -0.26
SHMT2-208ENST00000553868 ZG16O60844 167 aa13.44□□□□□ -0.26
SHMT2-208ENST00000553868 TNFRSF21O75509 655 aa13.44□□□□□ -0.26
SHMT2-208ENST00000553868 CREG1O75629 220 aa13.44□□□□□ -0.26
SHMT2-208ENST00000553868 ETFAP13804 333 aa13.44□□□□□ -0.26
SHMT2-208ENST00000553868 TNNI3P19429 210 aa13.44□□□□□ -0.26
SHMT2-208ENST00000553868 MAOAP21397 527 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms