RNA–Protein interactions for RNA: ENST00000545440.5

SNHG1-223, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2 BASIC

Gene SNHG1, Length 754 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-223ENST00000545440 PTGER1P34995 402 aa7.07□□□□□ -1.28
SNHG1-223ENST00000545440 RFC3P40938 356 aa7.07□□□□□ -1.28
SNHG1-223ENST00000545440 TRA2BP62995 288 aaKnown RBP7.07□□□□□ -1.28
SNHG1-223ENST00000545440 HSF1Q00613 529 aa7.07□□□□□ -1.28
SNHG1-223ENST00000545440 FUT7Q11130 342 aa7.07□□□□□ -1.28
SNHG1-223ENST00000545440 ART3Q13508 389 aa7.07□□□□□ -1.28
SNHG1-223ENST00000545440 ZNF267Q14586 743 aaPredicted RBP7.07□□□□□ -1.28
SNHG1-223ENST00000545440 KCNMB1Q16558 191 aa7.07□□□□□ -1.28
SNHG1-223ENST00000545440 HYAL4Q2M3T9 481 aa7.07□□□□□ -1.28
SNHG1-223ENST00000545440 ZNF791Q3KP31 576 aaPredicted RBP7.07□□□□□ -1.28
SNHG1-223ENST00000545440 CCDC153Q494R4 210 aa7.07□□□□□ -1.28
SNHG1-223ENST00000545440 SPIN4Q56A73 249 aa7.07□□□□□ -1.28
SNHG1-223ENST00000545440 CMPK2Q5EBM0 449 aa7.07□□□□□ -1.28
SNHG1-223ENST00000545440 SGO1Q5FBB7 561 aa7.07□□□□□ -1.28
SNHG1-223ENST00000545440 PIGGQ5H8A4 983 aa7.07□□□□□ -1.28
SNHG1-223ENST00000545440 TCHHL1Q5QJ38 904 aaPredicted RBP7.07□□□□□ -1.28
SNHG1-223ENST00000545440 C6orf163Q5TEZ5 329 aa7.07□□□□□ -1.28
SNHG1-223ENST00000545440 STEAP3Q658P3 488 aa7.07□□□□□ -1.28
SNHG1-223ENST00000545440 HIST2H2BCQ6DN03 193 aa7.07□□□□□ -1.28
SNHG1-223ENST00000545440 SLC48A1Q6P1K1 146 aa7.07□□□□□ -1.28
SNHG1-223ENST00000545440 ARHGAP11AQ6P4F7 1023 aa7.07□□□□□ -1.28
SNHG1-223ENST00000545440 ZYG11AQ6WRX3 759 aa7.07□□□□□ -1.28
SNHG1-223ENST00000545440 SH2D5Q6ZV89 423 aa7.07□□□□□ -1.28
SNHG1-223ENST00000545440 SLC22A16Q86VW1 577 aa7.07□□□□□ -1.28
SNHG1-223ENST00000545440 WFDC3Q8IUB2 231 aa7.07□□□□□ -1.28
SNHG1-223ENST00000545440 SLC34A3Q8N130 599 aa7.07□□□□□ -1.28
SNHG1-223ENST00000545440 Q8N1Y9 231 aa7.07□□□□□ -1.28
SNHG1-223ENST00000545440 FBXW8Q8N3Y1 598 aa7.07□□□□□ -1.28
SNHG1-223ENST00000545440 FAM109AQ8N4B1 249 aa7.07□□□□□ -1.28
SNHG1-223ENST00000545440 C1orf52Q8N6N3 182 aaKnown RBP7.07□□□□□ -1.28
SNHG1-223ENST00000545440 GBP7Q8N8V2 638 aaPredicted RBP7.07□□□□□ -1.28
SNHG1-223ENST00000545440 ZNF441Q8N8Z8 693 aa7.07□□□□□ -1.28
SNHG1-223ENST00000545440 C17orf47Q8NEP4 570 aa7.07□□□□□ -1.28
SNHG1-223ENST00000545440 OR4K14Q8NGD5 310 aa7.07□□□□□ -1.28
SNHG1-223ENST00000545440 RDH11Q8TC12 318 aa7.07□□□□□ -1.28
SNHG1-223ENST00000545440 PHOSPHO1Q8TCT1 267 aa7.07□□□□□ -1.28
SNHG1-223ENST00000545440 AGAP11Q8TF27 550 aa7.07□□□□□ -1.28
SNHG1-223ENST00000545440 PPWD1Q96BP3 646 aaKnown RBP7.07□□□□□ -1.28
SNHG1-223ENST00000545440 GAL3ST4Q96RP7 486 aa7.07□□□□□ -1.28
SNHG1-223ENST00000545440 HBEGFQ99075 208 aa7.07□□□□□ -1.28
SNHG1-223ENST00000545440 FAM173AQ9BQD7 235 aa7.07□□□□□ -1.28
SNHG1-223ENST00000545440 FAIM2Q9BWQ8 316 aa7.07□□□□□ -1.28
SNHG1-223ENST00000545440 TTTY12Q9BZ98 90 aa7.07□□□□□ -1.28
SNHG1-223ENST00000545440 ACPTQ9BZG2 426 aa7.07□□□□□ -1.28
SNHG1-223ENST00000545440 GSTO2Q9H4Y5 243 aa7.07□□□□□ -1.28
SNHG1-223ENST00000545440 ZDHHC11Q9H8X9 412 aa7.07□□□□□ -1.28
SNHG1-223ENST00000545440 SH2D2AQ9NP31 389 aa7.07□□□□□ -1.28
SNHG1-223ENST00000545440 VPS29Q9UBQ0 182 aa7.07□□□□□ -1.28
SNHG1-223ENST00000545440 EMCNQ9ULC0 261 aa7.07□□□□□ -1.28
SNHG1-223ENST00000545440 ENTPD4Q9Y227 616 aa7.07□□□□□ -1.28
SNHG1-223ENST00000545440 MEMO1Q9Y316 297 aa7.07□□□□□ -1.28
SNHG1-223ENST00000545440 KLF2Q9Y5W3 355 aaPredicted RBP7.07□□□□□ -1.28
SNHG1-223ENST00000545440 CENPEQ02224 2701 aa7.07□□□□□ -1.28
SNHG1-223ENST00000545440 ITPR2Q14571 2701 aa7.07□□□□□ -1.28
SNHG1-223ENST00000545440 MED12Q93074 2177 aa7.06□□□□□ -1.28
SNHG1-223ENST00000545440 C2orf92A0A1B0GVN3 265 aa7.06□□□□□ -1.28
SNHG1-223ENST00000545440 A0A1W2PPM1 405 aa7.06□□□□□ -1.28
SNHG1-223ENST00000545440 A0A1W2PS29 197 aa7.06□□□□□ -1.28
SNHG1-223ENST00000545440 PINLYPA6NC86 204 aa7.06□□□□□ -1.28
SNHG1-223ENST00000545440 OR14I1A6ND48 311 aa7.06□□□□□ -1.28
SNHG1-223ENST00000545440 WASHC1A8K0Z3 465 aa7.06□□□□□ -1.28
SNHG1-223ENST00000545440 ALG1L2C9J202 215 aa7.06□□□□□ -1.28
SNHG1-223ENST00000545440 PRSS44E7EML9 344 aa7.06□□□□□ -1.28
SNHG1-223ENST00000545440 E9PLN8 166 aa7.06□□□□□ -1.28
SNHG1-223ENST00000545440 G3V2L1 256 aa7.06□□□□□ -1.28
SNHG1-223ENST00000545440 PGRMC2O15173 223 aa7.06□□□□□ -1.28
SNHG1-223ENST00000545440 ULK1O75385 1050 aa7.06□□□□□ -1.28
SNHG1-223ENST00000545440 P04436 131 aa7.06□□□□□ -1.28
SNHG1-223ENST00000545440 CCL3P10147 92 aa7.06□□□□□ -1.28
SNHG1-223ENST00000545440 MYL2P10916 166 aa7.06□□□□□ -1.28
SNHG1-223ENST00000545440 PORP16435 677 aaPredicted RBP7.06□□□□□ -1.28
SNHG1-223ENST00000545440 CSNK2A2P19784 350 aaPredicted RBP7.06□□□□□ -1.28
SNHG1-223ENST00000545440 CNR1P21554 472 aa7.06□□□□□ -1.28
SNHG1-223ENST00000545440 SERPINB3P29508 390 aa7.06□□□□□ -1.28
SNHG1-223ENST00000545440 TIA1P31483 386 aaKnown RBP eCLIP7.06□□□□□ -1.284e-6■■■■□ 22.9
SNHG1-223ENST00000545440 CRHR1P34998 444 aa7.06□□□□□ -1.28
SNHG1-223ENST00000545440 PTGS2P35354 604 aa7.06□□□□□ -1.28
SNHG1-223ENST00000545440 GSTM5P46439 218 aa7.06□□□□□ -1.28
SNHG1-223ENST00000545440 SLCO1A2P46721 670 aa7.06□□□□□ -1.28
SNHG1-223ENST00000545440 CCT5P48643 541 aa7.06□□□□□ -1.28
SNHG1-223ENST00000545440 TMED10P49755 219 aaKnown RBP7.06□□□□□ -1.28
SNHG1-223ENST00000545440 XKP51811 444 aa7.06□□□□□ -1.28
SNHG1-223ENST00000545440 SMSP52788 366 aa7.06□□□□□ -1.28
SNHG1-223ENST00000545440 DNAJB13P59910 316 aa7.06□□□□□ -1.28
SNHG1-223ENST00000545440 ADORA2A-AS1P86434 159 aa7.06□□□□□ -1.28
SNHG1-223ENST00000545440 PLGLB1Q02325 96 aa7.06□□□□□ -1.28
SNHG1-223ENST00000545440 ACSM2AQ08AH3 577 aa7.06□□□□□ -1.28
SNHG1-223ENST00000545440 FOXO1Q12778 655 aa7.06□□□□□ -1.28
SNHG1-223ENST00000545440 RPS6KA2Q15349 733 aa7.06□□□□□ -1.28
SNHG1-223ENST00000545440 NTRK2Q16620 822 aa7.06□□□□□ -1.28
SNHG1-223ENST00000545440 ZNF750Q32MQ0 723 aa7.06□□□□□ -1.28
SNHG1-223ENST00000545440 SLC22A10Q63ZE4 541 aa7.06□□□□□ -1.28
SNHG1-223ENST00000545440 ACSM2BQ68CK6 577 aa7.06□□□□□ -1.28
SNHG1-223ENST00000545440 XKRXQ6PP77 449 aa7.06□□□□□ -1.28
SNHG1-223ENST00000545440 FRMD7Q6ZUT3 714 aa7.06□□□□□ -1.28
SNHG1-223ENST00000545440 FAM47EQ6ZV65 393 aa7.06□□□□□ -1.28
SNHG1-223ENST00000545440 MRGPRGQ86SM5 289 aa7.06□□□□□ -1.28
SNHG1-223ENST00000545440 TAGAPQ8N103 731 aa7.06□□□□□ -1.28
SNHG1-223ENST00000545440 RIBC1Q8N443 379 aaPredicted RBP7.06□□□□□ -1.28
SNHG1-223ENST00000545440 ZNF615Q8N8J6 731 aa7.06□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 66.4 ms