RNA–Protein interactions for RNA: ENST00000541169.1

VPS33A-205, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 4

Gene VPS33A, Length 594 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-205ENST00000541169 F10P00742 488 aa17.3■□□□□ 0.36
VPS33A-205ENST00000541169 HMGN2P05204 90 aaKnown RBP17.3■□□□□ 0.36
VPS33A-205ENST00000541169 ABCB1P08183 1280 aaPredicted RBP17.3■□□□□ 0.36
VPS33A-205ENST00000541169 CNR1P21554 472 aa17.3■□□□□ 0.36
VPS33A-205ENST00000541169 IL12BP29460 328 aa17.3■□□□□ 0.36
VPS33A-205ENST00000541169 MAP3K8P41279 467 aa17.3■□□□□ 0.36
VPS33A-205ENST00000541169 PHC1P78364 1004 aa17.3■□□□□ 0.36
VPS33A-205ENST00000541169 PAOXQ6QHF9 649 aa17.3■□□□□ 0.36
VPS33A-205ENST00000541169 FAM180AQ6UWF9 173 aa17.3■□□□□ 0.36
VPS33A-205ENST00000541169 LYPD8Q6UX82 237 aa17.3■□□□□ 0.36
VPS33A-205ENST00000541169 C16orf47Q6ZP98 133 aaPredicted RBP17.3■□□□□ 0.36
VPS33A-205ENST00000541169 GK5Q6ZS86 529 aa17.3■□□□□ 0.36
VPS33A-205ENST00000541169 CPLX4Q7Z7G2 160 aa17.3■□□□□ 0.36
VPS33A-205ENST00000541169 CLECL1Q8IZS7 167 aa17.3■□□□□ 0.36
VPS33A-205ENST00000541169 Q8NA96 180 aa17.3■□□□□ 0.36
VPS33A-205ENST00000541169 SIMC1Q8NDZ2 872 aa17.3■□□□□ 0.36
VPS33A-205ENST00000541169 OMA1Q96E52 524 aa17.3■□□□□ 0.36
VPS33A-205ENST00000541169 DTNBP1Q96EV8 351 aa17.3■□□□□ 0.36
VPS33A-205ENST00000541169 GIMAP5Q96F15 307 aa17.3■□□□□ 0.36
VPS33A-205ENST00000541169 SLC35A4Q96G79 324 aa17.3■□□□□ 0.36
VPS33A-205ENST00000541169 CXorf36Q9H7Y0 433 aa17.3■□□□□ 0.36
VPS33A-205ENST00000541169 ANKRA2Q9H9E1 313 aa17.3■□□□□ 0.36
VPS33A-205ENST00000541169 FAM53CQ9NYF3 392 aa17.3■□□□□ 0.36
VPS33A-205ENST00000541169 CCDC167Q9P0B6 97 aa17.3■□□□□ 0.36
VPS33A-205ENST00000541169 CBLCQ9ULV8 474 aa17.3■□□□□ 0.36
VPS33A-205ENST00000541169 ATRXP46100 2492 aa17.3■□□□□ 0.36
VPS33A-205ENST00000541169 HS6ST1O60243 411 aa17.29■□□□□ 0.36
VPS33A-205ENST00000541169 CCDC22O60826 627 aa17.29■□□□□ 0.36
VPS33A-205ENST00000541169 SNX4O95219 450 aa17.29■□□□□ 0.36
VPS33A-205ENST00000541169 AK1P00568 194 aa17.29■□□□□ 0.36
VPS33A-205ENST00000541169 EFNA1P20827 205 aaPredicted RBP17.29■□□□□ 0.36
VPS33A-205ENST00000541169 SOAT1P35610 550 aa17.29■□□□□ 0.36
VPS33A-205ENST00000541169 PIGAP37287 484 aa17.29■□□□□ 0.36
VPS33A-205ENST00000541169 DGKQP52824 942 aa17.29■□□□□ 0.36
VPS33A-205ENST00000541169 CORO7P57737 925 aa17.29■□□□□ 0.36
VPS33A-205ENST00000541169 GNGT1P63211 74 aa17.29■□□□□ 0.36
VPS33A-205ENST00000541169 CDC73Q6P1J9 531 aa17.29■□□□□ 0.36
VPS33A-205ENST00000541169 ZNF227Q86WZ6 799 aa17.29■□□□□ 0.36
VPS33A-205ENST00000541169 FBXW8Q8N3Y1 598 aa17.29■□□□□ 0.36
VPS33A-205ENST00000541169 BCORP1Q8N888 145 aa17.29■□□□□ 0.36
VPS33A-205ENST00000541169 FAM13CQ8NE31 585 aa17.29■□□□□ 0.36
VPS33A-205ENST00000541169 MIPOL1Q8TD10 442 aa17.29■□□□□ 0.36
VPS33A-205ENST00000541169 GPR151Q8TDV0 419 aa17.29■□□□□ 0.36
VPS33A-205ENST00000541169 COL21A1Q96P44 957 aa17.29■□□□□ 0.36
VPS33A-205ENST00000541169 PHF12Q96QT6 1004 aa17.29■□□□□ 0.36
VPS33A-205ENST00000541169 FAM173AQ9BQD7 235 aa17.29■□□□□ 0.36
VPS33A-205ENST00000541169 G6PC3Q9BUM1 346 aa17.29■□□□□ 0.36
VPS33A-205ENST00000541169 PIGUQ9H490 435 aa17.29■□□□□ 0.36
VPS33A-205ENST00000541169 ZNF385DQ9H6B1 395 aa17.29■□□□□ 0.36
VPS33A-205ENST00000541169 SH2D2AQ9NP31 389 aa17.29■□□□□ 0.36
VPS33A-205ENST00000541169 EQTNQ9NQ60 294 aa17.29■□□□□ 0.36
VPS33A-205ENST00000541169 CHCHD2Q9Y6H1 151 aaPredicted RBP17.29■□□□□ 0.36
VPS33A-205ENST00000541169 RNF103-CHMP3A0A140T963 221 aa17.28■□□□□ 0.36
VPS33A-205ENST00000541169 ASPDHA6ND91 283 aa17.28■□□□□ 0.36
VPS33A-205ENST00000541169 ASNA1O43681 348 aa17.28■□□□□ 0.36
VPS33A-205ENST00000541169 REM1O75628 298 aa17.28■□□□□ 0.36
VPS33A-205ENST00000541169 C1QL1O75973 258 aa17.28■□□□□ 0.36
VPS33A-205ENST00000541169 ANP32DO95626 131 aa17.28■□□□□ 0.36
VPS33A-205ENST00000541169 CPSF4O95639 269 aaKnown RBP17.28■□□□□ 0.36
VPS33A-205ENST00000541169 KRT75O95678 551 aa17.28■□□□□ 0.36
VPS33A-205ENST00000541169 GABRA3P34903 492 aa17.28■□□□□ 0.36
VPS33A-205ENST00000541169 CHI3L1P36222 383 aaPredicted RBP17.28■□□□□ 0.36
VPS33A-205ENST00000541169 ZFP36L2P47974 494 aaKnown RBP17.28■□□□□ 0.36
VPS33A-205ENST00000541169 MAPRE2Q15555 327 aa17.28■□□□□ 0.36
VPS33A-205ENST00000541169 AGKQ53H12 422 aa17.28■□□□□ 0.36
VPS33A-205ENST00000541169 EXOSC6Q5RKV6 272 aaKnown RBP17.28■□□□□ 0.36
VPS33A-205ENST00000541169 CGB2Q6NT52 195 aa17.28■□□□□ 0.36
VPS33A-205ENST00000541169 BNC2Q6ZN30 1099 aaPredicted RBP17.28■□□□□ 0.36
VPS33A-205ENST00000541169 C6orf120Q7Z4R8 191 aa17.28■□□□□ 0.36
VPS33A-205ENST00000541169 GALNTL5Q7Z4T8 443 aa17.28■□□□□ 0.36
VPS33A-205ENST00000541169 SPATA21Q7Z572 469 aa17.28■□□□□ 0.36
VPS33A-205ENST00000541169 ANKRD46Q86W74 232 aa17.28■□□□□ 0.36
VPS33A-205ENST00000541169 ADAMTS15Q8TE58 950 aa17.28■□□□□ 0.36
VPS33A-205ENST00000541169 SLC9A6Q92581 669 aa17.28■□□□□ 0.36
VPS33A-205ENST00000541169 DIO2Q92813 273 aa17.28■□□□□ 0.36
VPS33A-205ENST00000541169 SPDL1Q96EA4 605 aa17.28■□□□□ 0.36
VPS33A-205ENST00000541169 NEURL3Q96EH8 262 aa17.28■□□□□ 0.36
VPS33A-205ENST00000541169 BARD1Q99728 777 aaKnown RBP17.28■□□□□ 0.36
VPS33A-205ENST00000541169 GPATCH2Q9NW75 528 aa17.28■□□□□ 0.36
VPS33A-205ENST00000541169 THUMPD1Q9NXG2 353 aaKnown RBP17.28■□□□□ 0.36
VPS33A-205ENST00000541169 A0A1W2PP18 115 aa17.27■□□□□ 0.36
VPS33A-205ENST00000541169 PEX1O43933 1283 aa17.27■□□□□ 0.36
VPS33A-205ENST00000541169 ZNF354AO60765 605 aaPredicted RBP17.27■□□□□ 0.36
VPS33A-205ENST00000541169 IL33O95760 270 aa17.27■□□□□ 0.36
VPS33A-205ENST00000541169 CLK3P49761 638 aaKnown RBP17.27■□□□□ 0.36
VPS33A-205ENST00000541169 LASP1Q14847 261 aaKnown RBP17.27■□□□□ 0.36
VPS33A-205ENST00000541169 INPP5JQ15735 1006 aaPredicted RBP17.27■□□□□ 0.36
VPS33A-205ENST00000541169 NNATQ16517 81 aa17.27■□□□□ 0.36
VPS33A-205ENST00000541169 TIGD2Q4W5G0 525 aa17.27■□□□□ 0.36
VPS33A-205ENST00000541169 SLC30A6Q6NXT4 461 aa17.27■□□□□ 0.36
VPS33A-205ENST00000541169 NPSR1Q6W5P4 371 aa17.27■□□□□ 0.36
VPS33A-205ENST00000541169 MDGA2Q7Z553 956 aa17.27■□□□□ 0.36
VPS33A-205ENST00000541169 ZFP62Q8NB50 900 aaPredicted RBP17.27■□□□□ 0.36
VPS33A-205ENST00000541169 OR9I1Q8NGQ6 314 aa17.27■□□□□ 0.36
VPS33A-205ENST00000541169 SPPL2AQ8TCT8 520 aa17.27■□□□□ 0.36
VPS33A-205ENST00000541169 NUDT8Q8WV74 236 aa17.27■□□□□ 0.36
VPS33A-205ENST00000541169 C10orf82Q8WW14 230 aa17.27■□□□□ 0.36
VPS33A-205ENST00000541169 JADE3Q92613 823 aa17.27■□□□□ 0.36
VPS33A-205ENST00000541169 TMBIM1Q969X1 311 aa17.27■□□□□ 0.36
VPS33A-205ENST00000541169 SLC35A5Q9BS91 424 aa17.27■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms