RNA–Protein interactions for RNA: ENST00000533242.1

NEDD8-207, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 1 (best)

Gene NEDD8, Length 2,300 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-207ENST00000533242 XPNPEP2O43895 674 aa7.68□□□□□ -1.18
NEDD8-207ENST00000533242 MAN1A2O60476 641 aa7.68□□□□□ -1.18
NEDD8-207ENST00000533242 PSIP1O75475 530 aaKnown RBP7.68□□□□□ -1.18
NEDD8-207ENST00000533242 AP2A2O94973 939 aa7.68□□□□□ -1.18
NEDD8-207ENST00000533242 CRYABP02511 175 aaKnown RBP7.68□□□□□ -1.18
NEDD8-207ENST00000533242 GBAP04062 536 aa7.68□□□□□ -1.18
NEDD8-207ENST00000533242 CYP4B1P13584 511 aa7.68□□□□□ -1.18
NEDD8-207ENST00000533242 ZNF182P17025 639 aaPredicted RBP7.68□□□□□ -1.18
NEDD8-207ENST00000533242 ACADLP28330 430 aa7.68□□□□□ -1.18
NEDD8-207ENST00000533242 IMPA1P29218 277 aa7.68□□□□□ -1.18
NEDD8-207ENST00000533242 PEBP1P30086 187 aaKnown RBP7.68□□□□□ -1.18
NEDD8-207ENST00000533242 MAGEA2P43356 314 aa7.68□□□□□ -1.18
NEDD8-207ENST00000533242 KIR3DL1P43629 444 aa7.68□□□□□ -1.18
NEDD8-207ENST00000533242 TNFSF10P50591 281 aa7.68□□□□□ -1.18
NEDD8-207ENST00000533242 GAB1Q13480 694 aa7.68□□□□□ -1.18
NEDD8-207ENST00000533242 C6orf141Q5SZD1 244 aa7.68□□□□□ -1.18
NEDD8-207ENST00000533242 GTF2IRD2BQ6EKJ0 949 aa7.68□□□□□ -1.18
NEDD8-207ENST00000533242 DHRS4L2Q6PKH6 230 aa7.68□□□□□ -1.18
NEDD8-207ENST00000533242 AGTRAPQ6RW13 159 aa7.68□□□□□ -1.18
NEDD8-207ENST00000533242 GTF2IRD2Q86UP8 949 aa7.68□□□□□ -1.18
NEDD8-207ENST00000533242 ZZZ3Q8IYH5 903 aa7.68□□□□□ -1.18
NEDD8-207ENST00000533242 SPARTQ8N0X7 666 aa7.68□□□□□ -1.18
NEDD8-207ENST00000533242 TMEM132CQ8N3T6 1108 aa7.68□□□□□ -1.18
NEDD8-207ENST00000533242 ZCCHC7Q8N3Z6 543 aaKnown RBP7.68□□□□□ -1.18
NEDD8-207ENST00000533242 TTC29Q8NA56 475 aaPredicted RBP7.68□□□□□ -1.18
NEDD8-207ENST00000533242 B4GALNT2Q8NHY0 566 aa7.68□□□□□ -1.18
NEDD8-207ENST00000533242 MCOLN3Q8TDD5 553 aa7.68□□□□□ -1.18
NEDD8-207ENST00000533242 MAL2Q969L2 176 aa7.68□□□□□ -1.18
NEDD8-207ENST00000533242 FBXL8Q96CD0 374 aa7.68□□□□□ -1.18
NEDD8-207ENST00000533242 PANX1Q96RD7 426 aa7.68□□□□□ -1.18
NEDD8-207ENST00000533242 CUTCQ9NTM9 273 aa7.68□□□□□ -1.18
NEDD8-207ENST00000533242 SIRT5Q9NXA8 310 aa7.68□□□□□ -1.18
NEDD8-207ENST00000533242 USE1Q9NZ43 259 aa7.68□□□□□ -1.18
NEDD8-207ENST00000533242 ASF1AQ9Y294 204 aa7.68□□□□□ -1.18
NEDD8-207ENST00000533242 NPIPB8E9PQR5 432 aa7.68□□□□□ -1.18
NEDD8-207ENST00000533242 CLIC1O00299 241 aa7.68□□□□□ -1.18
NEDD8-207ENST00000533242 E2F6O75461 281 aa7.68□□□□□ -1.18
NEDD8-207ENST00000533242 CPSF4O95639 269 aaKnown RBP7.68□□□□□ -1.18
NEDD8-207ENST00000533242 HPRP00739 348 aa7.68□□□□□ -1.18
NEDD8-207ENST00000533242 ACPPP15309 386 aa7.68□□□□□ -1.18
NEDD8-207ENST00000533242 RBPJQ06330 500 aa7.68□□□□□ -1.18
NEDD8-207ENST00000533242 SP140Q13342 867 aa7.68□□□□□ -1.18
NEDD8-207ENST00000533242 GRM7Q14831 915 aa7.68□□□□□ -1.18
NEDD8-207ENST00000533242 IQCCQ4KMZ1 466 aa7.68□□□□□ -1.18
NEDD8-207ENST00000533242 ZC3H12BQ5HYM0 836 aaKnown RBP7.68□□□□□ -1.18
NEDD8-207ENST00000533242 TCTE1Q5JU00 501 aa7.68□□□□□ -1.18
NEDD8-207ENST00000533242 CATSPEREQ5SY80 951 aa7.68□□□□□ -1.18
NEDD8-207ENST00000533242 ZNF621Q6ZSS3 439 aa7.68□□□□□ -1.18
NEDD8-207ENST00000533242 ZDHHC21Q8IVQ6 265 aa7.68□□□□□ -1.18
NEDD8-207ENST00000533242 ZC3H7AQ8IWR0 971 aaKnown RBP7.68□□□□□ -1.18
NEDD8-207ENST00000533242 C8orf59Q8N0T1 100 aaPredicted RBP7.68□□□□□ -1.18
NEDD8-207ENST00000533242 TCAIMQ8N3R3 496 aa7.68□□□□□ -1.18
NEDD8-207ENST00000533242 C1orf52Q8N6N3 182 aaKnown RBP7.68□□□□□ -1.18
NEDD8-207ENST00000533242 OR5K2Q8NHB8 316 aa7.68□□□□□ -1.18
NEDD8-207ENST00000533242 ZDHHC19Q8WVZ1 309 aaPredicted RBP7.68□□□□□ -1.18
NEDD8-207ENST00000533242 ASZ1Q8WWH4 475 aa7.68□□□□□ -1.18
NEDD8-207ENST00000533242 HAS2Q92819 552 aa7.68□□□□□ -1.18
NEDD8-207ENST00000533242 UBE2FQ969M7 185 aa7.68□□□□□ -1.18
NEDD8-207ENST00000533242 NEIL2Q969S2 332 aa7.68□□□□□ -1.18
NEDD8-207ENST00000533242 PKP4Q99569 1192 aa7.68□□□□□ -1.18
NEDD8-207ENST00000533242 SH3GL1Q99961 368 aa7.68□□□□□ -1.18
NEDD8-207ENST00000533242 ZNF160Q9HCG1 818 aa7.68□□□□□ -1.18
NEDD8-207ENST00000533242 VPS29Q9UBQ0 182 aa7.68□□□□□ -1.18
NEDD8-207ENST00000533242 SEC14L3Q9UDX4 400 aa7.68□□□□□ -1.18
NEDD8-207ENST00000533242 TDRKHQ9Y2W6 561 aaKnown RBP7.68□□□□□ -1.18
NEDD8-207ENST00000533242 LOC100130705A0A1B0GUX0 176 aa7.67□□□□□ -1.18
NEDD8-207ENST00000533242 SLC5A10A0PJK1 596 aa7.67□□□□□ -1.18
NEDD8-207ENST00000533242 GABRR3A8MPY1 467 aa7.67□□□□□ -1.18
NEDD8-207ENST00000533242 GCM2O75603 506 aaPredicted RBP7.67□□□□□ -1.18
NEDD8-207ENST00000533242 SEC14L2O76054 403 aa7.67□□□□□ -1.18
NEDD8-207ENST00000533242 FTH1P02794 183 aa7.67□□□□□ -1.18
NEDD8-207ENST00000533242 SEMG1P04279 462 aa7.67□□□□□ -1.18
NEDD8-207ENST00000533242 TFPTP0C1Z6 253 aa7.67□□□□□ -1.18
NEDD8-207ENST00000533242 COX7A2P14406 83 aa7.67□□□□□ -1.18
NEDD8-207ENST00000533242 FUT4P22083 530 aa7.67□□□□□ -1.18
NEDD8-207ENST00000533242 MST1P26927 711 aa7.67□□□□□ -1.18
NEDD8-207ENST00000533242 AQP1P29972 269 aa7.67□□□□□ -1.18
NEDD8-207ENST00000533242 PKLRP30613 574 aa7.67□□□□□ -1.18
NEDD8-207ENST00000533242 DAPP51397 102 aa7.67□□□□□ -1.18
NEDD8-207ENST00000533242 SMSP52788 366 aa7.67□□□□□ -1.18
NEDD8-207ENST00000533242 PLA2G16P53816 162 aa7.67□□□□□ -1.18
NEDD8-207ENST00000533242 CASP6P55212 293 aa7.67□□□□□ -1.18
NEDD8-207ENST00000533242 SH3BGRP55822 239 aaPredicted RBP7.67□□□□□ -1.18
NEDD8-207ENST00000533242 AP1S2P56377 157 aa7.67□□□□□ -1.18
NEDD8-207ENST00000533242 DCTN2Q13561 401 aaKnown RBP7.67□□□□□ -1.18
NEDD8-207ENST00000533242 HKDC1Q2TB90 917 aa7.67□□□□□ -1.18
NEDD8-207ENST00000533242 ZNF385BQ569K4 471 aa7.67□□□□□ -1.18
NEDD8-207ENST00000533242 SHISA6Q6ZSJ9 500 aa7.67□□□□□ -1.18
NEDD8-207ENST00000533242 TSEN54Q7Z6J9 526 aaKnown RBP7.67□□□□□ -1.18
NEDD8-207ENST00000533242 CCDC71Q8IV32 467 aaPredicted RBP7.67□□□□□ -1.18
NEDD8-207ENST00000533242 OR5K1Q8NHB7 308 aa7.67□□□□□ -1.18
NEDD8-207ENST00000533242 HUS1BQ8NHY5 278 aa7.67□□□□□ -1.18
NEDD8-207ENST00000533242 TBC1D15Q8TC07 691 aa7.67□□□□□ -1.18
NEDD8-207ENST00000533242 C14orf79Q96F83 325 aa7.67□□□□□ -1.18
NEDD8-207ENST00000533242 ZNF285Q96NJ3 590 aa7.67□□□□□ -1.18
NEDD8-207ENST00000533242 RBM4BQ9BQ04 359 aaKnown RBP7.67□□□□□ -1.18
NEDD8-207ENST00000533242 CRB3Q9BUF7 120 aa7.67□□□□□ -1.18
NEDD8-207ENST00000533242 RBM4Q9BWF3 364 aaKnown RBP7.67□□□□□ -1.18
NEDD8-207ENST00000533242 SPNS1Q9H2V7 528 aa7.67□□□□□ -1.18
NEDD8-207ENST00000533242 MAGIXQ9H6Y5 334 aa7.67□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms