RNA–Protein interactions for RNA: ENST00000526669.6

CD44-224, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 5 BASIC

Gene CD44, Length 870 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-224ENST00000526669 ANKRD27Q96NW4 1050 aa12.68□□□□□ -0.38
CD44-224ENST00000526669 BTBD9Q96Q07 612 aa12.68□□□□□ -0.38
CD44-224ENST00000526669 LMF2Q9BU23 707 aaKnown RBP12.68□□□□□ -0.38
CD44-224ENST00000526669 PRORYQ9H606 182 aa12.68□□□□□ -0.38
CD44-224ENST00000526669 ZNF552Q9H707 407 aaPredicted RBP12.68□□□□□ -0.38
CD44-224ENST00000526669 ZBTB20Q9HC78 741 aaPredicted RBP12.68□□□□□ -0.38
CD44-224ENST00000526669 MYOTQ9UBF9 498 aa12.68□□□□□ -0.38
CD44-224ENST00000526669 GPR55Q9Y2T6 319 aaPredicted RBP12.68□□□□□ -0.38
CD44-224ENST00000526669 OR10H1Q9Y4A9 318 aa12.68□□□□□ -0.38
CD44-224ENST00000526669 MPDZO75970 2070 aa12.68□□□□□ -0.38
CD44-224ENST00000526669 FRG2CA6NGY1 282 aa12.67□□□□□ -0.38
CD44-224ENST00000526669 NKX2-2O95096 273 aa12.67□□□□□ -0.38
CD44-224ENST00000526669 NUDT7P0C024 238 aa12.67□□□□□ -0.38
CD44-224ENST00000526669 T-ENOLP0DO92 83 aa12.67□□□□□ -0.38
CD44-224ENST00000526669 SOX3P41225 446 aa12.67□□□□□ -0.38
CD44-224ENST00000526669 MAN2A2P49641 1150 aa12.67□□□□□ -0.38
CD44-224ENST00000526669 MVDP53602 400 aa12.67□□□□□ -0.38
CD44-224ENST00000526669 SOX8P57073 446 aa12.67□□□□□ -0.38
CD44-224ENST00000526669 SLC25A3Q00325 362 aa12.67□□□□□ -0.38
CD44-224ENST00000526669 PIGGQ5H8A4 983 aa12.67□□□□□ -0.38
CD44-224ENST00000526669 RABL3Q5HYI8 236 aa12.67□□□□□ -0.38
CD44-224ENST00000526669 CRB2Q5IJ48 1285 aa12.67□□□□□ -0.38
CD44-224ENST00000526669 ACER2Q5QJU3 275 aa12.67□□□□□ -0.38
CD44-224ENST00000526669 CCNJQ5T5M9 372 aa12.67□□□□□ -0.38
CD44-224ENST00000526669 ZNF468Q5VIY5 522 aaPredicted RBP12.67□□□□□ -0.38
CD44-224ENST00000526669 ABHD17BQ5VST6 288 aa12.67□□□□□ -0.38
CD44-224ENST00000526669 AGAP7PQ5VUJ5 663 aa12.67□□□□□ -0.38
CD44-224ENST00000526669 DESI1Q6ICB0 168 aa12.67□□□□□ -0.38
CD44-224ENST00000526669 NANOGP8Q6NSW7 305 aa12.67□□□□□ -0.38
CD44-224ENST00000526669 RINLQ6ZS11 566 aa12.67□□□□□ -0.38
CD44-224ENST00000526669 GPR155Q7Z3F1 870 aa12.67□□□□□ -0.38
CD44-224ENST00000526669 OR52N2Q8NGI0 321 aa12.67□□□□□ -0.38
CD44-224ENST00000526669 DNAJB8Q8NHS0 232 aa12.67□□□□□ -0.38
CD44-224ENST00000526669 SNRNP27Q8WVK2 155 aaKnown RBP12.67□□□□□ -0.38
CD44-224ENST00000526669 XAGE5Q8WWM1 108 aa12.67□□□□□ -0.38
CD44-224ENST00000526669 ASB15Q8WXK1 588 aa12.67□□□□□ -0.38
CD44-224ENST00000526669 TMBIM1Q969X1 311 aa12.67□□□□□ -0.38
CD44-224ENST00000526669 AGAP4Q96P64 663 aa12.67□□□□□ -0.38
CD44-224ENST00000526669 RASL10BQ96S79 203 aa12.67□□□□□ -0.38
CD44-224ENST00000526669 THUMPD3Q9BV44 507 aaKnown RBP12.67□□□□□ -0.38
CD44-224ENST00000526669 PIF1Q9H611 641 aa12.67□□□□□ -0.38
CD44-224ENST00000526669 NANOGQ9H9S0 305 aa12.67□□□□□ -0.38
CD44-224ENST00000526669 ANKRD10Q9NXR5 420 aa12.67□□□□□ -0.38
CD44-224ENST00000526669 PLA2G3Q9NZ20 509 aa12.67□□□□□ -0.38
CD44-224ENST00000526669 GMPR2Q9P2T1 348 aaKnown RBP12.67□□□□□ -0.38
CD44-224ENST00000526669 ATMQ13315 3056 aa12.67□□□□□ -0.38
CD44-224ENST00000526669 ATRXP46100 2492 aa12.66□□□□□ -0.38
CD44-224ENST00000526669 EVPLLA8MZ36 301 aa12.66□□□□□ -0.38
CD44-224ENST00000526669 B2RBV5 119 aa12.66□□□□□ -0.38
CD44-224ENST00000526669 HMGN4O00479 90 aa12.66□□□□□ -0.38
CD44-224ENST00000526669 CEACAM4O75871 244 aa12.66□□□□□ -0.38
CD44-224ENST00000526669 OR6B1O95007 311 aa12.66□□□□□ -0.38
CD44-224ENST00000526669 ALPPP05187 535 aa12.66□□□□□ -0.38
CD44-224ENST00000526669 KRT16P08779 473 aa12.66□□□□□ -0.38
CD44-224ENST00000526669 PPIBP23284 216 aaKnown RBP12.66□□□□□ -0.38
CD44-224ENST00000526669 MAP3K8P41279 467 aa12.66□□□□□ -0.38
CD44-224ENST00000526669 SSR4P51571 173 aa12.66□□□□□ -0.38
CD44-224ENST00000526669 POLE2P56282 527 aa12.66□□□□□ -0.38
CD44-224ENST00000526669 DSTNP60981 165 aa12.66□□□□□ -0.38
CD44-224ENST00000526669 PSME3P61289 254 aa12.66□□□□□ -0.38
CD44-224ENST00000526669 DCAF7P61962 342 aa12.66□□□□□ -0.38
CD44-224ENST00000526669 POU6F2P78424 691 aaPredicted RBP12.66□□□□□ -0.38
CD44-224ENST00000526669 PLCXD2Q0VAA5 305 aa12.66□□□□□ -0.38
CD44-224ENST00000526669 RGNQ15493 299 aa12.66□□□□□ -0.38
CD44-224ENST00000526669 EXOSC6Q5RKV6 272 aaKnown RBP12.66□□□□□ -0.38
CD44-224ENST00000526669 ZCCHC12Q6PEW1 402 aa12.66□□□□□ -0.38
CD44-224ENST00000526669 FIGNL1Q6PIW4 674 aa12.66□□□□□ -0.38
CD44-224ENST00000526669 C6orf89Q6UWU4 347 aa12.66□□□□□ -0.38
CD44-224ENST00000526669 ISLR2Q6UXK2 745 aa12.66□□□□□ -0.38
CD44-224ENST00000526669 IL20RBQ6UXL0 311 aa12.66□□□□□ -0.38
CD44-224ENST00000526669 TAGAPQ8N103 731 aa12.66□□□□□ -0.38
CD44-224ENST00000526669 SLC34A3Q8N130 599 aa12.66□□□□□ -0.38
CD44-224ENST00000526669 LGI4Q8N135 537 aa12.66□□□□□ -0.38
CD44-224ENST00000526669 OR5M3Q8NGP4 307 aa12.66□□□□□ -0.38
CD44-224ENST00000526669 SLC22A8Q8TCC7 542 aa12.66□□□□□ -0.38
CD44-224ENST00000526669 EFHD2Q96C19 240 aaPredicted RBP12.66□□□□□ -0.38
CD44-224ENST00000526669 ROPN1LQ96C74 230 aa12.66□□□□□ -0.38
CD44-224ENST00000526669 OMA1Q96E52 524 aa12.66□□□□□ -0.38
CD44-224ENST00000526669 HSPBAP1Q96EW2 488 aa12.66□□□□□ -0.38
CD44-224ENST00000526669 PIGUQ9H490 435 aa12.66□□□□□ -0.38
CD44-224ENST00000526669 RAD21L1Q9H4I0 556 aa12.66□□□□□ -0.38
CD44-224ENST00000526669 Q9N2J8 555 aa12.66□□□□□ -0.38
CD44-224ENST00000526669 FBXO34Q9NWN3 711 aa12.66□□□□□ -0.38
CD44-224ENST00000526669 STMN3Q9NZ72 180 aa12.66□□□□□ -0.38
CD44-224ENST00000526669 TEKT2Q9UIF3 430 aa12.66□□□□□ -0.38
CD44-224ENST00000526669 PACSIN3Q9UKS6 424 aa12.66□□□□□ -0.38
CD44-224ENST00000526669 CBLCQ9ULV8 474 aa12.66□□□□□ -0.38
CD44-224ENST00000526669 USP22Q9UPT9 525 aa12.66□□□□□ -0.38
CD44-224ENST00000526669 YARS2Q9Y2Z4 477 aaKnown RBP12.66□□□□□ -0.38
CD44-224ENST00000526669 DNAJC13O75165 2243 aa12.66□□□□□ -0.38
CD44-224ENST00000526669 EPG5Q9HCE0 2579 aa12.65□□□□□ -0.38
CD44-224ENST00000526669 NPIPA5A0A0B4J1W7 369 aa12.65□□□□□ -0.38
CD44-224ENST00000526669 A8MVJ9 347 aa12.65□□□□□ -0.38
CD44-224ENST00000526669 NPIPA7E9PJI5 369 aa12.65□□□□□ -0.38
CD44-224ENST00000526669 K7EM74 188 aa12.65□□□□□ -0.38
CD44-224ENST00000526669 REM1O75628 298 aa12.65□□□□□ -0.38
CD44-224ENST00000526669 WDPCPO95876 746 aa12.65□□□□□ -0.38
CD44-224ENST00000526669 IGKV1D-16P01601 117 aa12.65□□□□□ -0.38
CD44-224ENST00000526669 FAM87AP0C7U9 286 aa12.65□□□□□ -0.38
CD44-224ENST00000526669 NPIPA8P0DM63 369 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms