RNA–Protein interactions for RNA: ENST00000515682.5

SH3TC1-225, Transcript of SH3 domain and tetratricopeptide repeats 1, humanhuman

TSL 2

Gene SH3TC1, Length 4,293 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3TC1-225ENST00000515682 ARAFP10398 606 aa12.86□□□□□ -0.35
SH3TC1-225ENST00000515682 SYPL1Q16563 259 aa12.86□□□□□ -0.35
SH3TC1-225ENST00000515682 METTL2BQ6P1Q9 378 aaKnown RBP12.86□□□□□ -0.35
SH3TC1-225ENST00000515682 C22orf39Q6P5X5 142 aa12.86□□□□□ -0.35
SH3TC1-225ENST00000515682 WASH2PQ6VEQ5 465 aa12.86□□□□□ -0.35
SH3TC1-225ENST00000515682 ANKRD33Q7Z3H0 272 aa12.86□□□□□ -0.35
SH3TC1-225ENST00000515682 FAM98AQ8NCA5 519 aaKnown RBP12.86□□□□□ -0.35
SH3TC1-225ENST00000515682 ZNF740Q8NDX6 193 aa12.86□□□□□ -0.35
SH3TC1-225ENST00000515682 HMGB4Q8WW32 186 aa12.86□□□□□ -0.35
SH3TC1-225ENST00000515682 MYLIPQ8WY64 445 aa12.86□□□□□ -0.35
SH3TC1-225ENST00000515682 CREB3L1Q96BA8 519 aa12.86□□□□□ -0.35
SH3TC1-225ENST00000515682 NKX2-4Q9H2Z4 354 aa12.86□□□□□ -0.35
SH3TC1-225ENST00000515682 RASD1Q9Y272 281 aa12.86□□□□□ -0.35
SH3TC1-225ENST00000515682 CACNG2Q9Y698 323 aa12.86□□□□□ -0.35
SH3TC1-225ENST00000515682 CACNB4O00305 520 aaPredicted RBP12.85□□□□□ -0.35
SH3TC1-225ENST00000515682 GABRPO00591 440 aa12.85□□□□□ -0.35
SH3TC1-225ENST00000515682 SCAMP1O15126 338 aa12.85□□□□□ -0.35
SH3TC1-225ENST00000515682 PRODHO43272 600 aa12.85□□□□□ -0.35
SH3TC1-225ENST00000515682 MMP20O60882 483 aa12.85□□□□□ -0.35
SH3TC1-225ENST00000515682 XCR1P46094 333 aa12.85□□□□□ -0.35
SH3TC1-225ENST00000515682 SPINT3P49223 89 aa12.85□□□□□ -0.35
SH3TC1-225ENST00000515682 HYAL2Q12891 473 aa12.85□□□□□ -0.35
SH3TC1-225ENST00000515682 IRF3Q14653 427 aa12.85□□□□□ -0.35
SH3TC1-225ENST00000515682 VITQ6UXI7 678 aa12.85□□□□□ -0.35
SH3TC1-225ENST00000515682 MMP21Q8N119 569 aa12.85□□□□□ -0.35
SH3TC1-225ENST00000515682 SNX33Q8WV41 574 aa12.85□□□□□ -0.35
SH3TC1-225ENST00000515682 ECHDC3Q96DC8 303 aa12.85□□□□□ -0.35
SH3TC1-225ENST00000515682 ELMOD3Q96FG2 381 aa12.85□□□□□ -0.35
SH3TC1-225ENST00000515682 OR10A4Q9H209 315 aa12.85□□□□□ -0.35
SH3TC1-225ENST00000515682 PHPT1Q9NRX4 125 aaPredicted RBP12.85□□□□□ -0.35
SH3TC1-225ENST00000515682 EVA1BQ9NVM1 165 aa12.85□□□□□ -0.35
SH3TC1-225ENST00000515682 WBP1LQ9NX94 342 aa12.85□□□□□ -0.35
SH3TC1-225ENST00000515682 OR6C2Q9NZP2 312 aa12.85□□□□□ -0.35
SH3TC1-225ENST00000515682 B4GALT3O60512 393 aa12.85□□□□□ -0.35
SH3TC1-225ENST00000515682 ZNF821O75541 412 aaPredicted RBP12.85□□□□□ -0.35
SH3TC1-225ENST00000515682 GNSP15586 552 aa12.85□□□□□ -0.35
SH3TC1-225ENST00000515682 CD70P32970 193 aa12.85□□□□□ -0.35
SH3TC1-225ENST00000515682 RPL4P36578 427 aaKnown RBP12.85□□□□□ -0.35
SH3TC1-225ENST00000515682 FNTBP49356 437 aa12.85□□□□□ -0.35
SH3TC1-225ENST00000515682 TGM3Q08188 693 aa12.85□□□□□ -0.35
SH3TC1-225ENST00000515682 TMEM115Q12893 351 aaPredicted RBP12.85□□□□□ -0.35
SH3TC1-225ENST00000515682 ZNF79Q15937 498 aa12.85□□□□□ -0.35
SH3TC1-225ENST00000515682 C1orf216Q8TAB5 229 aa12.85□□□□□ -0.35
SH3TC1-225ENST00000515682 SLC38A5Q8WUX1 472 aa12.85□□□□□ -0.35
SH3TC1-225ENST00000515682 CHAC2Q8WUX2 184 aa12.85□□□□□ -0.35
SH3TC1-225ENST00000515682 SMPDL3AQ92484 453 aa12.85□□□□□ -0.35
SH3TC1-225ENST00000515682 NEUROD4Q9HD90 331 aa12.85□□□□□ -0.35
SH3TC1-225ENST00000515682 ACOXLQ9NUZ1 547 aa12.85□□□□□ -0.35
SH3TC1-225ENST00000515682 MGAT4CQ9UBM8 478 aa12.85□□□□□ -0.35
SH3TC1-225ENST00000515682 GNB5O14775 395 aa12.85□□□□□ -0.35
SH3TC1-225ENST00000515682 ALPPP05187 535 aa12.85□□□□□ -0.35
SH3TC1-225ENST00000515682 HBQ1P09105 142 aa12.85□□□□□ -0.35
SH3TC1-225ENST00000515682 CTSOP43234 321 aaPredicted RBP12.85□□□□□ -0.35
SH3TC1-225ENST00000515682 GCGRP47871 477 aa12.85□□□□□ -0.35
SH3TC1-225ENST00000515682 GGTA1PQ4G0N0 100 aa12.85□□□□□ -0.35
SH3TC1-225ENST00000515682 ZNF683Q8IZ20 524 aa12.85□□□□□ -0.35
SH3TC1-225ENST00000515682 MRPL43Q8N983 215 aaKnown RBP12.85□□□□□ -0.35
SH3TC1-225ENST00000515682 TOR1AIP2Q8NFQ8 470 aa12.85□□□□□ -0.35
SH3TC1-225ENST00000515682 TRMT10AQ8TBZ6 339 aaKnown RBP12.85□□□□□ -0.35
SH3TC1-225ENST00000515682 EID2BQ96D98 161 aa12.85□□□□□ -0.35
SH3TC1-225ENST00000515682 NXPE2Q96DL1 559 aa12.85□□□□□ -0.35
SH3TC1-225ENST00000515682 GPN1Q9HCN4 374 aaPredicted RBP12.85□□□□□ -0.35
SH3TC1-225ENST00000515682 TRAPPC4Q9Y296 219 aa12.85□□□□□ -0.35
SH3TC1-225ENST00000515682 V9GYH0 126 aa12.85□□□□□ -0.35
SH3TC1-225ENST00000515682 ELAVL4P26378 380 aaKnown RBP12.85□□□□□ -0.35
SH3TC1-225ENST00000515682 HLA-DMAP28067 261 aa12.85□□□□□ -0.35
SH3TC1-225ENST00000515682 PDHA2P29803 388 aa12.85□□□□□ -0.35
SH3TC1-225ENST00000515682 PYCR1P32322 319 aa12.85□□□□□ -0.35
SH3TC1-225ENST00000515682 SRP9P49458 86 aaKnown RBP12.85□□□□□ -0.35
SH3TC1-225ENST00000515682 KHKP50053 298 aa12.85□□□□□ -0.35
SH3TC1-225ENST00000515682 PFN3P60673 137 aa12.85□□□□□ -0.35
SH3TC1-225ENST00000515682 DBPQ10586 325 aaPredicted RBP12.85□□□□□ -0.35
SH3TC1-225ENST00000515682 ILKQ13418 452 aa12.85□□□□□ -0.35
SH3TC1-225ENST00000515682 GRIN2CQ14957 1233 aa12.85□□□□□ -0.35
SH3TC1-225ENST00000515682 ABI3BPQ7Z7G0 1075 aa12.85□□□□□ -0.35
SH3TC1-225ENST00000515682 TMEM25Q86YD3 366 aa12.85□□□□□ -0.35
SH3TC1-225ENST00000515682 HERVK_113Q902F9 699 aa12.85□□□□□ -0.35
SH3TC1-225ENST00000515682 IMP3Q9NV31 184 aaKnown RBP12.85□□□□□ -0.35
SH3TC1-225ENST00000515682 NDUFB11Q9NX14 153 aa12.85□□□□□ -0.35
SH3TC1-225ENST00000515682 MARK1Q9P0L2 795 aa12.85□□□□□ -0.35
SH3TC1-225ENST00000515682 SLC43A1O75387 559 aa12.84□□□□□ -0.35
SH3TC1-225ENST00000515682 MT-ND4P03905 459 aa12.84□□□□□ -0.35
SH3TC1-225ENST00000515682 PITPNBP48739 271 aa12.84□□□□□ -0.35
SH3TC1-225ENST00000515682 WNT3P56703 355 aa12.84□□□□□ -0.35
SH3TC1-225ENST00000515682 GMFBP60983 142 aa12.84□□□□□ -0.35
SH3TC1-225ENST00000515682 PLBD1Q6P4A8 553 aa12.84□□□□□ -0.35
SH3TC1-225ENST00000515682 UNC5DQ6UXZ4 953 aa12.84□□□□□ -0.35
SH3TC1-225ENST00000515682 CHST14Q8NCH0 376 aa12.84□□□□□ -0.35
SH3TC1-225ENST00000515682 SLC7A13Q8TCU3 470 aa12.84□□□□□ -0.35
SH3TC1-225ENST00000515682 WFDC5Q8TCV5 224 aa12.84□□□□□ -0.35
SH3TC1-225ENST00000515682 ZNF582Q96NG8 517 aaPredicted RBP12.84□□□□□ -0.35
SH3TC1-225ENST00000515682 CCDC3Q9BQI4 270 aa12.84□□□□□ -0.35
SH3TC1-225ENST00000515682 NDC1Q9BTX1 674 aa12.84□□□□□ -0.35
SH3TC1-225ENST00000515682 NUP50Q9UKX7 468 aa12.84□□□□□ -0.35
SH3TC1-225ENST00000515682 TNS1Q9HBL0 1735 aaKnown RBP12.84□□□□□ -0.35
SH3TC1-225ENST00000515682 ATP6V1G2-DDX39BF2Z307 99 aa12.84□□□□□ -0.35
SH3TC1-225ENST00000515682 H7BY64 318 aa12.84□□□□□ -0.35
SH3TC1-225ENST00000515682 ALDOBP05062 364 aa12.84□□□□□ -0.35
SH3TC1-225ENST00000515682 CTSCP53634 463 aa12.84□□□□□ -0.35
SH3TC1-225ENST00000515682 PSMA6P60900 246 aaKnown RBP12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms