RNA–Protein interactions for RNA: ENST00000496567.5

C9orf3-222, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 1,575 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-222ENST00000496567 OR10H1Q9Y4A9 318 aa20.12■□□□□ 0.81
C9orf3-222ENST00000496567 C15orf38-AP3S2A0A0A6YYH1 394 aa20.12■□□□□ 0.81
C9orf3-222ENST00000496567 TO15178 435 aa20.12■□□□□ 0.81
C9orf3-222ENST00000496567 ASNA1O43681 348 aa20.12■□□□□ 0.81
C9orf3-222ENST00000496567 OR2J2O76002 312 aa20.12■□□□□ 0.81
C9orf3-222ENST00000496567 ALPPP05187 535 aa20.12■□□□□ 0.81
C9orf3-222ENST00000496567 GABRA3P34903 492 aa20.12■□□□□ 0.81
C9orf3-222ENST00000496567 CRATP43155 626 aa20.12■□□□□ 0.81
C9orf3-222ENST00000496567 MAN2A2P49641 1150 aa20.12■□□□□ 0.81
C9orf3-222ENST00000496567 MXRA7P84157 204 aa20.12■□□□□ 0.81
C9orf3-222ENST00000496567 RAPSNQ13702 412 aa20.12■□□□□ 0.81
C9orf3-222ENST00000496567 DDX59Q5T1V6 619 aaKnown RBP eCLIP20.12■□□□□ 0.81
C9orf3-222ENST00000496567 NANOGP8Q6NSW7 305 aa20.12■□□□□ 0.81
C9orf3-222ENST00000496567 ISLR2Q6UXK2 745 aa20.12■□□□□ 0.81
C9orf3-222ENST00000496567 NPSR1Q6W5P4 371 aa20.12■□□□□ 0.81
C9orf3-222ENST00000496567 ZNF771Q7L3S4 317 aaPredicted RBP20.12■□□□□ 0.81
C9orf3-222ENST00000496567 ARPINQ7Z6K5 226 aa20.12■□□□□ 0.81
C9orf3-222ENST00000496567 OR8J3Q8NGG0 315 aa20.12■□□□□ 0.81
C9orf3-222ENST00000496567 FBXO30Q8TB52 745 aa20.12■□□□□ 0.81
C9orf3-222ENST00000496567 OR7D2Q96RA2 312 aa20.12■□□□□ 0.81
C9orf3-222ENST00000496567 SLC39A3Q9BRY0 314 aa20.12■□□□□ 0.81
C9orf3-222ENST00000496567 SERHL2Q9H4I8 314 aa20.12■□□□□ 0.81
C9orf3-222ENST00000496567 PRORYQ9H606 182 aa20.12■□□□□ 0.81
C9orf3-222ENST00000496567 ZNF552Q9H707 407 aaPredicted RBP20.12■□□□□ 0.81
C9orf3-222ENST00000496567 NANOGQ9H9S0 305 aa20.12■□□□□ 0.81
C9orf3-222ENST00000496567 THUMPD1Q9NXG2 353 aaKnown RBP20.12■□□□□ 0.81
C9orf3-222ENST00000496567 NDE1Q9NXR1 346 aa20.12■□□□□ 0.81
C9orf3-222ENST00000496567 STMN3Q9NZ72 180 aa20.12■□□□□ 0.81
C9orf3-222ENST00000496567 CDK2AP1O14519 115 aa20.11■□□□□ 0.81
C9orf3-222ENST00000496567 C1QCP02747 245 aa20.11■□□□□ 0.81
C9orf3-222ENST00000496567 T-ENOLP0DO92 83 aa20.11■□□□□ 0.81
C9orf3-222ENST00000496567 SSR4P51571 173 aa20.11■□□□□ 0.81
C9orf3-222ENST00000496567 MVDP53602 400 aa20.11■□□□□ 0.81
C9orf3-222ENST00000496567 CASP9P55211 416 aa20.11■□□□□ 0.81
C9orf3-222ENST00000496567 RGNQ15493 299 aa20.11■□□□□ 0.81
C9orf3-222ENST00000496567 NNATQ16517 81 aa20.11■□□□□ 0.81
C9orf3-222ENST00000496567 DUSP5Q16690 384 aa20.11■□□□□ 0.81
C9orf3-222ENST00000496567 CYP27C1Q4G0S4 372 aa20.11■□□□□ 0.81
C9orf3-222ENST00000496567 TNFAIP8L2Q6P589 184 aaPredicted RBP20.11■□□□□ 0.81
C9orf3-222ENST00000496567 C16orf47Q6ZP98 133 aaPredicted RBP20.11■□□□□ 0.81
C9orf3-222ENST00000496567 OR5D16Q8NGK9 328 aa20.11■□□□□ 0.81
C9orf3-222ENST00000496567 LMF1Q96S06 567 aa20.11■□□□□ 0.81
C9orf3-222ENST00000496567 RASL10BQ96S79 203 aa20.11■□□□□ 0.81
C9orf3-222ENST00000496567 EXD2Q9NVH0 621 aa20.11■□□□□ 0.81
C9orf3-222ENST00000496567 PCDHGA9Q9Y5G4 932 aaKnown RBP20.11■□□□□ 0.81
C9orf3-222ENST00000496567 MKRN2OSH3BPM6 223 aa20.1■□□□□ 0.81
C9orf3-222ENST00000496567 GPX2P18283 190 aa20.1■□□□□ 0.81
C9orf3-222ENST00000496567 TRHRP34981 398 aaPredicted RBP20.1■□□□□ 0.81
C9orf3-222ENST00000496567 COX20Q5RI15 118 aa20.1■□□□□ 0.81
C9orf3-222ENST00000496567 ATAD3BQ5T9A4 648 aa20.1■□□□□ 0.81
C9orf3-222ENST00000496567 HORMAD2Q8N7B1 307 aa20.1■□□□□ 0.81
C9orf3-222ENST00000496567 COX18Q8N8Q8 333 aa20.1■□□□□ 0.81
C9orf3-222ENST00000496567 EXTL1Q92935 676 aa20.1■□□□□ 0.81
C9orf3-222ENST00000496567 SLC35A4Q96G79 324 aa20.1■□□□□ 0.81
C9orf3-222ENST00000496567 GPATCH1Q9BRR8 931 aaKnown RBP20.1■□□□□ 0.81
C9orf3-222ENST00000496567 MRTO4Q9UKD2 239 aaKnown RBP20.1■□□□□ 0.81
C9orf3-222ENST00000496567 CBLCQ9ULV8 474 aa20.1■□□□□ 0.81
C9orf3-222ENST00000496567 TPRP12270 2363 aaKnown RBP20.1■□□□□ 0.81
C9orf3-222ENST00000496567 B2RBV5 119 aa20.09■□□□□ 0.81
C9orf3-222ENST00000496567 MAN1A2O60476 641 aa20.09■□□□□ 0.81
C9orf3-222ENST00000496567 OR12D1P0DN82 309 aa20.09■□□□□ 0.81
C9orf3-222ENST00000496567 SLC6A2P23975 617 aa20.09■□□□□ 0.81
C9orf3-222ENST00000496567 TMED10P49755 219 aaKnown RBP20.09■□□□□ 0.81
C9orf3-222ENST00000496567 MTPNP58546 118 aa20.09■□□□□ 0.81
C9orf3-222ENST00000496567 MFAP5Q13361 173 aa20.09■□□□□ 0.81
C9orf3-222ENST00000496567 DECR1Q16698 335 aa20.09■□□□□ 0.81
C9orf3-222ENST00000496567 ST3GAL2Q16842 350 aa20.09■□□□□ 0.81
C9orf3-222ENST00000496567 OPN5Q6U736 354 aa20.09■□□□□ 0.81
C9orf3-222ENST00000496567 C16orf89Q6UX73 402 aa20.09■□□□□ 0.81
C9orf3-222ENST00000496567 SLC34A3Q8N130 599 aa20.09■□□□□ 0.81
C9orf3-222ENST00000496567 TMEM156Q8N614 296 aa20.09■□□□□ 0.81
C9orf3-222ENST00000496567 XAGE5Q8WWM1 108 aa20.09■□□□□ 0.81
C9orf3-222ENST00000496567 ASB15Q8WXK1 588 aa20.09■□□□□ 0.81
C9orf3-222ENST00000496567 CDS1Q92903 461 aa20.09■□□□□ 0.81
C9orf3-222ENST00000496567 OTUB1Q96FW1 271 aaPredicted RBP20.09■□□□□ 0.81
C9orf3-222ENST00000496567 BTBD2Q9BX70 525 aa20.09■□□□□ 0.81
C9orf3-222ENST00000496567 AP3M1Q9Y2T2 418 aa20.09■□□□□ 0.81
C9orf3-222ENST00000496567 NPFFR2Q9Y5X5 522 aa20.09■□□□□ 0.81
C9orf3-222ENST00000496567 HMGN4O00479 90 aa20.08■□□□□ 0.81
C9orf3-222ENST00000496567 NADKO95544 446 aaPredicted RBP20.08■□□□□ 0.81
C9orf3-222ENST00000496567 AK1P00568 194 aa20.08■□□□□ 0.81
C9orf3-222ENST00000496567 ETFAP13804 333 aa20.08■□□□□ 0.81
C9orf3-222ENST00000496567 NAGAP17050 411 aa20.08■□□□□ 0.81
C9orf3-222ENST00000496567 ABCD3P28288 659 aa20.08■□□□□ 0.81
C9orf3-222ENST00000496567 KRT20P35900 424 aa20.08■□□□□ 0.81
C9orf3-222ENST00000496567 PIGAP37287 484 aa20.08■□□□□ 0.81
C9orf3-222ENST00000496567 PSMD4P55036 377 aaKnown RBP20.08■□□□□ 0.81
C9orf3-222ENST00000496567 POLE2P56282 527 aa20.08■□□□□ 0.81
C9orf3-222ENST00000496567 DSTNP60981 165 aa20.08■□□□□ 0.81
C9orf3-222ENST00000496567 POU6F2P78424 691 aaPredicted RBP20.08■□□□□ 0.81
C9orf3-222ENST00000496567 PLCXD2Q0VAA5 305 aa20.08■□□□□ 0.81
C9orf3-222ENST00000496567 C8orf82Q6P1X6 216 aaPredicted RBP20.08■□□□□ 0.81
C9orf3-222ENST00000496567 LINC00696Q6ZRV3 163 aa20.08■□□□□ 0.81
C9orf3-222ENST00000496567 DND1Q8IYX4 353 aaKnown RBP20.08■□□□□ 0.81
C9orf3-222ENST00000496567 BEST3Q8N1M1 668 aa20.08■□□□□ 0.81
C9orf3-222ENST00000496567 PIK3R3Q92569 461 aa20.08■□□□□ 0.81
C9orf3-222ENST00000496567 CRELD1Q96HD1 420 aa20.08■□□□□ 0.81
C9orf3-222ENST00000496567 SMAD5Q99717 465 aaKnown RBP20.08■□□□□ 0.81
C9orf3-222ENST00000496567 IKZF5Q9H5V7 419 aa20.08■□□□□ 0.81
C9orf3-222ENST00000496567 L3MBTL1Q9Y468 752 aa20.08■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms