RNA–Protein interactions for RNA: ENST00000489573.5

SMC4-221, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 1 (best)

Gene SMC4, Length 1,553 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-221ENST00000489573 ART5Q96L15 291 aa20.14■□□□□ 0.81
SMC4-221ENST00000489573 VSTM2LQ96N03 204 aa20.14■□□□□ 0.81
SMC4-221ENST00000489573 COL21A1Q96P44 957 aa20.14■□□□□ 0.81
SMC4-221ENST00000489573 SEMA6AQ9H2E6 1030 aa20.14■□□□□ 0.81
SMC4-221ENST00000489573 WDR54Q9H977 334 aa20.14■□□□□ 0.81
SMC4-221ENST00000489573 AKIRIN1Q9H9L7 192 aaPredicted RBP20.14■□□□□ 0.81
SMC4-221ENST00000489573 PRODH2Q9UF12 536 aa20.14■□□□□ 0.81
SMC4-221ENST00000489573 SATB2Q9UPW6 733 aa20.14■□□□□ 0.81
SMC4-221ENST00000489573 GPC6Q9Y625 555 aaPredicted RBP20.14■□□□□ 0.81
SMC4-221ENST00000489573 SEC16AO15027 2179 aa20.14■□□□□ 0.81
SMC4-221ENST00000489573 PMS2P1A4D2B8 440 aa20.13■□□□□ 0.81
SMC4-221ENST00000489573 ALOX12BO75342 701 aa20.13■□□□□ 0.81
SMC4-221ENST00000489573 SERPINB7O75635 380 aa20.13■□□□□ 0.81
SMC4-221ENST00000489573 MFN2O95140 757 aa20.13■□□□□ 0.81
SMC4-221ENST00000489573 AK1P00568 194 aa20.13■□□□□ 0.81
SMC4-221ENST00000489573 LDLRP01130 860 aa20.13■□□□□ 0.81
SMC4-221ENST00000489573 FTH1P19P0C7X4 201 aa20.13■□□□□ 0.81
SMC4-221ENST00000489573 MAGEA2P43356 314 aa20.13■□□□□ 0.81
SMC4-221ENST00000489573 EMP2P54851 167 aa20.13■□□□□ 0.81
SMC4-221ENST00000489573 OGFRL1Q5TC84 451 aaPredicted RBP20.13■□□□□ 0.81
SMC4-221ENST00000489573 LPCAT4Q643R3 524 aa20.13■□□□□ 0.81
SMC4-221ENST00000489573 FAAH2Q6GMR7 532 aa20.13■□□□□ 0.81
SMC4-221ENST00000489573 FAM198BQ6UWH4 519 aa20.13■□□□□ 0.81
SMC4-221ENST00000489573 LANCL3Q6ZV70 420 aa20.13■□□□□ 0.81
SMC4-221ENST00000489573 OLIG3Q7RTU3 272 aa20.13■□□□□ 0.81
SMC4-221ENST00000489573 ARMC8Q8IUR7 673 aa20.13■□□□□ 0.81
SMC4-221ENST00000489573 GALNT6Q8NCL4 622 aa20.13■□□□□ 0.81
SMC4-221ENST00000489573 C16orf52Q8NHV5 167 aa20.13■□□□□ 0.81
SMC4-221ENST00000489573 SLC2A12Q8TD20 617 aa20.13■□□□□ 0.81
SMC4-221ENST00000489573 VCX3BQ9H321 246 aa20.13■□□□□ 0.81
SMC4-221ENST00000489573 C3orf18Q9UK00 162 aa20.13■□□□□ 0.81
SMC4-221ENST00000489573 SPAARA0A1B0GVQ0 90 aa20.12■□□□□ 0.81
SMC4-221ENST00000489573 FAM149AA5PLN7 773 aa20.12■□□□□ 0.81
SMC4-221ENST00000489573 TTC36A6NLP5 189 aa20.12■□□□□ 0.81
SMC4-221ENST00000489573 STK17BO94768 372 aa20.12■□□□□ 0.81
SMC4-221ENST00000489573 DDAH2O95865 285 aa20.12■□□□□ 0.81
SMC4-221ENST00000489573 CSRP1P21291 193 aaKnown RBP20.12■□□□□ 0.81
SMC4-221ENST00000489573 SLC5A2P31639 672 aa20.12■□□□□ 0.81
SMC4-221ENST00000489573 GABRA3P34903 492 aa20.12■□□□□ 0.81
SMC4-221ENST00000489573 KCNJ10P78508 379 aa20.12■□□□□ 0.81
SMC4-221ENST00000489573 IFI44LQ53G44 452 aa20.12■□□□□ 0.81
SMC4-221ENST00000489573 DCST2Q5T1A1 773 aa20.12■□□□□ 0.81
SMC4-221ENST00000489573 ZNF517Q6ZMY9 492 aaPredicted RBP20.12■□□□□ 0.81
SMC4-221ENST00000489573 ASCL5Q7RTU5 278 aa20.12■□□□□ 0.81
SMC4-221ENST00000489573 ANKRD37Q7Z713 158 aa20.12■□□□□ 0.81
SMC4-221ENST00000489573 ZDHHC21Q8IVQ6 265 aa20.12■□□□□ 0.81
SMC4-221ENST00000489573 SMYD1Q8NB12 490 aa20.12■□□□□ 0.81
SMC4-221ENST00000489573 WDR36Q8NI36 951 aaKnown RBP20.12■□□□□ 0.81
SMC4-221ENST00000489573 RASSF5Q8WWW0 418 aa20.12■□□□□ 0.81
SMC4-221ENST00000489573 METTL21AQ8WXB1 218 aa20.12■□□□□ 0.81
SMC4-221ENST00000489573 CENPNQ96H22 339 aaPredicted RBP20.12■□□□□ 0.81
SMC4-221ENST00000489573 CRB3Q9BUF7 120 aa20.12■□□□□ 0.81
SMC4-221ENST00000489573 SPATA5L1Q9BVQ7 753 aa20.12■□□□□ 0.81
SMC4-221ENST00000489573 OR8D2Q9GZM6 311 aa20.12■□□□□ 0.81
SMC4-221ENST00000489573 SLC38A1Q9H2H9 487 aa20.12■□□□□ 0.81
SMC4-221ENST00000489573 IL1RAPQ9NPH3 570 aa20.12■□□□□ 0.81
SMC4-221ENST00000489573 DTX4Q9Y2E6 619 aa20.12■□□□□ 0.81
SMC4-221ENST00000489573 PCDHGA3Q9Y5H0 932 aa20.12■□□□□ 0.81
SMC4-221ENST00000489573 PCNX2A6NKB5 2137 aa20.12■□□□□ 0.81
SMC4-221ENST00000489573 DSPPQ9NZW4 1301 aa20.12■□□□□ 0.81
SMC4-221ENST00000489573 KIF26BQ2KJY2 2108 aa20.12■□□□□ 0.81
SMC4-221ENST00000489573 CLOCKO15516 846 aa20.12■□□□□ 0.81
SMC4-221ENST00000489573 DEAF1O75398 565 aaPredicted RBP20.12■□□□□ 0.81
SMC4-221ENST00000489573 IGKV3-11P04433 115 aa20.12■□□□□ 0.81
SMC4-221ENST00000489573 FABP3P05413 133 aa20.12■□□□□ 0.81
SMC4-221ENST00000489573 CD247P20963 164 aa20.12■□□□□ 0.81
SMC4-221ENST00000489573 POU6F2P78424 691 aaPredicted RBP20.12■□□□□ 0.81
SMC4-221ENST00000489573 PSG6Q00889 435 aa20.12■□□□□ 0.81
SMC4-221ENST00000489573 CHRNEQ04844 493 aa20.12■□□□□ 0.81
SMC4-221ENST00000489573 FAM199XQ6PEV8 388 aaPredicted RBP20.12■□□□□ 0.81
SMC4-221ENST00000489573 ZNF721Q8TF20 911 aa20.12■□□□□ 0.81
SMC4-221ENST00000489573 PIK3R3Q92569 461 aa20.12■□□□□ 0.81
SMC4-221ENST00000489573 TACO1Q9BSH4 297 aaKnown RBP20.12■□□□□ 0.81
SMC4-221ENST00000489573 SEC14L3Q9UDX4 400 aa20.12■□□□□ 0.81
SMC4-221ENST00000489573 BAG5Q9UL15 447 aa20.12■□□□□ 0.81
SMC4-221ENST00000489573 TEX51A0A1B0GUA7 166 aa20.11■□□□□ 0.81
SMC4-221ENST00000489573 A0A1W2PNU3 283 aaPredicted RBP20.11■□□□□ 0.81
SMC4-221ENST00000489573 GFRA3O60609 400 aa20.11■□□□□ 0.81
SMC4-221ENST00000489573 SLC37A1P57057 533 aa20.11■□□□□ 0.81
SMC4-221ENST00000489573 LRRC36Q1X8D7 754 aa20.11■□□□□ 0.81
SMC4-221ENST00000489573 FRRS1Q6ZNA5 592 aa20.11■□□□□ 0.81
SMC4-221ENST00000489573 ZNF321PQ8N8H1 164 aa20.11■□□□□ 0.81
SMC4-221ENST00000489573 MORN4Q8NDC4 146 aa20.11■□□□□ 0.81
SMC4-221ENST00000489573 CATSPER1Q8NEC5 780 aa20.11■□□□□ 0.81
SMC4-221ENST00000489573 SPPL2AQ8TCT8 520 aa20.11■□□□□ 0.81
SMC4-221ENST00000489573 GEMIN6Q8WXD5 167 aaKnown RBP20.11■□□□□ 0.81
SMC4-221ENST00000489573 SDF2Q99470 211 aa20.11■□□□□ 0.81
SMC4-221ENST00000489573 BDH2Q9BUT1 245 aa20.11■□□□□ 0.81
SMC4-221ENST00000489573 ITPAQ9BY32 194 aa20.11■□□□□ 0.81
SMC4-221ENST00000489573 ZNF350Q9GZX5 532 aa20.11■□□□□ 0.81
SMC4-221ENST00000489573 CFL2Q9Y281 166 aa20.11■□□□□ 0.81
SMC4-221ENST00000489573 WDR45Q9Y484 360 aa20.11■□□□□ 0.81
SMC4-221ENST00000489573 GXYLT2A0PJZ3 443 aa20.1■□□□□ 0.81
SMC4-221ENST00000489573 ZIC2O95409 532 aaPredicted RBP20.1■□□□□ 0.81
SMC4-221ENST00000489573 DLGAP3O95886 979 aa20.1■□□□□ 0.81
SMC4-221ENST00000489573 CST1P01037 141 aa20.1■□□□□ 0.81
SMC4-221ENST00000489573 CAPNS1P04632 268 aa20.1■□□□□ 0.81
SMC4-221ENST00000489573 TRHRP34981 398 aaPredicted RBP20.1■□□□□ 0.81
SMC4-221ENST00000489573 VLDLRP98155 873 aa20.1■□□□□ 0.81
SMC4-221ENST00000489573 NCF4Q15080 339 aa20.1■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms