RNA–Protein interactions for RNA: ENST00000485618.1

SF3A1-208, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 2

Gene SF3A1, Length 593 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-208ENST00000485618 ZNF766Q5HY98 468 aa7.64□□□□□ -1.19
SF3A1-208ENST00000485618 C6orf10Q5SRN2 563 aa7.64□□□□□ -1.19
SF3A1-208ENST00000485618 GKAP1Q5VSY0 366 aaPredicted RBP7.64□□□□□ -1.19
SF3A1-208ENST00000485618 PAOXQ6QHF9 649 aa7.64□□□□□ -1.19
SF3A1-208ENST00000485618 BLOC1S3Q6QNY0 202 aa7.64□□□□□ -1.19
SF3A1-208ENST00000485618 ANGPTL8Q6UXH0 198 aa7.64□□□□□ -1.19
SF3A1-208ENST00000485618 IL20RBQ6UXL0 311 aa7.64□□□□□ -1.19
SF3A1-208ENST00000485618 GK5Q6ZS86 529 aa7.64□□□□□ -1.19
SF3A1-208ENST00000485618 Q6ZS92 163 aa7.64□□□□□ -1.19
SF3A1-208ENST00000485618 PACS2Q86VP3 889 aa7.64□□□□□ -1.19
SF3A1-208ENST00000485618 SLC44A2Q8IWA5 706 aaPredicted RBP7.64□□□□□ -1.19
SF3A1-208ENST00000485618 C9orf40Q8IXQ3 194 aa7.64□□□□□ -1.19
SF3A1-208ENST00000485618 SLC34A3Q8N130 599 aa7.64□□□□□ -1.19
SF3A1-208ENST00000485618 ZNF321PQ8N8H1 164 aa7.64□□□□□ -1.19
SF3A1-208ENST00000485618 PCYOX1LQ8NBM8 494 aa7.64□□□□□ -1.19
SF3A1-208ENST00000485618 FAM13CQ8NE31 585 aa7.64□□□□□ -1.19
SF3A1-208ENST00000485618 GOT1L1Q8NHS2 421 aaPredicted RBP7.64□□□□□ -1.19
SF3A1-208ENST00000485618 SLC9A6Q92581 669 aa7.64□□□□□ -1.19
SF3A1-208ENST00000485618 ADIPOR1Q96A54 375 aa7.64□□□□□ -1.19
SF3A1-208ENST00000485618 CMTM5Q96DZ9 223 aa7.64□□□□□ -1.19
SF3A1-208ENST00000485618 SPACA9Q96E40 222 aaPredicted RBP7.64□□□□□ -1.19
SF3A1-208ENST00000485618 SPDL1Q96EA4 605 aa7.64□□□□□ -1.19
SF3A1-208ENST00000485618 VSTM2LQ96N03 204 aa7.64□□□□□ -1.19
SF3A1-208ENST00000485618 COL21A1Q96P44 957 aa7.64□□□□□ -1.19
SF3A1-208ENST00000485618 STACQ99469 402 aa7.64□□□□□ -1.19
SF3A1-208ENST00000485618 SH3GL1Q99961 368 aa7.64□□□□□ -1.19
SF3A1-208ENST00000485618 MFRPQ9BY79 579 aa7.64□□□□□ -1.19
SF3A1-208ENST00000485618 HOXD1Q9GZZ0 328 aa7.64□□□□□ -1.19
SF3A1-208ENST00000485618 CACYBPQ9HB71 228 aaKnown RBP7.64□□□□□ -1.19
SF3A1-208ENST00000485618 FOLH1BQ9HBA9 442 aa7.64□□□□□ -1.19
SF3A1-208ENST00000485618 EQTNQ9NQ60 294 aa7.64□□□□□ -1.19
SF3A1-208ENST00000485618 DUSP22Q9NRW4 184 aa7.64□□□□□ -1.19
SF3A1-208ENST00000485618 SACM1LQ9NTJ5 587 aa7.64□□□□□ -1.19
SF3A1-208ENST00000485618 CCDC167Q9P0B6 97 aa7.64□□□□□ -1.19
SF3A1-208ENST00000485618 LEF1Q9UJU2 399 aaPredicted RBP7.64□□□□□ -1.19
SF3A1-208ENST00000485618 ZNF223Q9UK11 482 aaPredicted RBP7.64□□□□□ -1.19
SF3A1-208ENST00000485618 CBLCQ9ULV8 474 aa7.64□□□□□ -1.19
SF3A1-208ENST00000485618 ARL2BPQ9Y2Y0 163 aa7.64□□□□□ -1.19
SF3A1-208ENST00000485618 NDUFAF1Q9Y375 327 aa7.64□□□□□ -1.19
SF3A1-208ENST00000485618 PTPN13Q12923 2485 aa7.64□□□□□ -1.19
SF3A1-208ENST00000485618 A0A096LPI6 279 aa7.63□□□□□ -1.19
SF3A1-208ENST00000485618 RNF103-CHMP3A0A140T963 221 aa7.63□□□□□ -1.19
SF3A1-208ENST00000485618 A0A1W2PP18 115 aa7.63□□□□□ -1.19
SF3A1-208ENST00000485618 A0A1W2PS29 197 aa7.63□□□□□ -1.19
SF3A1-208ENST00000485618 OR6C70A6NIJ9 312 aa7.63□□□□□ -1.19
SF3A1-208ENST00000485618 BBIP1A8MTZ0 92 aa7.63□□□□□ -1.19
SF3A1-208ENST00000485618 H3BNH8 94 aa7.63□□□□□ -1.19
SF3A1-208ENST00000485618 NR5A2O00482 541 aa7.63□□□□□ -1.19
SF3A1-208ENST00000485618 ASNA1O43681 348 aa7.63□□□□□ -1.19
SF3A1-208ENST00000485618 PPM1BO75688 479 aa7.63□□□□□ -1.19
SF3A1-208ENST00000485618 DCTN3O75935 186 aa7.63□□□□□ -1.19
SF3A1-208ENST00000485618 RASAL1O95294 804 aa7.63□□□□□ -1.19
SF3A1-208ENST00000485618 NPPAP01160 153 aa7.63□□□□□ -1.19
SF3A1-208ENST00000485618 HMGN2P05204 90 aaKnown RBP7.63□□□□□ -1.19
SF3A1-208ENST00000485618 FBXO45P0C2W1 286 aa7.63□□□□□ -1.19
SF3A1-208ENST00000485618 ZCCHC18P0CG32 403 aa7.63□□□□□ -1.19
SF3A1-208ENST00000485618 CNR1P21554 472 aa7.63□□□□□ -1.19
SF3A1-208ENST00000485618 MATN1P21941 496 aa7.63□□□□□ -1.19
SF3A1-208ENST00000485618 ABCD3P28288 659 aa7.63□□□□□ -1.19
SF3A1-208ENST00000485618 SOX3P41225 446 aa7.63□□□□□ -1.19
SF3A1-208ENST00000485618 CDK9P50750 372 aaKnown RBP7.63□□□□□ -1.19
SF3A1-208ENST00000485618 DGKQP52824 942 aa7.63□□□□□ -1.19
SF3A1-208ENST00000485618 PNLIPRP2P54317 469 aa7.63□□□□□ -1.19
SF3A1-208ENST00000485618 HPCAP84074 193 aa7.63□□□□□ -1.19
SF3A1-208ENST00000485618 RCAN2Q14206 197 aa7.63□□□□□ -1.19
SF3A1-208ENST00000485618 NTRK2Q16620 822 aa7.63□□□□□ -1.19
SF3A1-208ENST00000485618 ZNF791Q3KP31 576 aaPredicted RBP7.63□□□□□ -1.19
SF3A1-208ENST00000485618 PLEKHN1Q494U1 663 aaPredicted RBP7.63□□□□□ -1.19
SF3A1-208ENST00000485618 TIGD2Q4W5G0 525 aa7.63□□□□□ -1.19
SF3A1-208ENST00000485618 ZNF385BQ569K4 471 aa7.63□□□□□ -1.19
SF3A1-208ENST00000485618 FHL5Q5TD97 284 aa7.63□□□□□ -1.19
SF3A1-208ENST00000485618 SLC6A19Q695T7 634 aa7.63□□□□□ -1.19
SF3A1-208ENST00000485618 SPINK14Q6IE38 97 aa7.63□□□□□ -1.19
SF3A1-208ENST00000485618 MFSD12Q6NUT3 480 aa7.63□□□□□ -1.19
SF3A1-208ENST00000485618 CDC73Q6P1J9 531 aa7.63□□□□□ -1.19
SF3A1-208ENST00000485618 FAM180AQ6UWF9 173 aa7.63□□□□□ -1.19
SF3A1-208ENST00000485618 C6orf120Q7Z4R8 191 aa7.63□□□□□ -1.19
SF3A1-208ENST00000485618 ANKRD46Q86W74 232 aa7.63□□□□□ -1.19
SF3A1-208ENST00000485618 FAM26EQ8N5C1 309 aa7.63□□□□□ -1.19
SF3A1-208ENST00000485618 RBMXL3Q8N7X1 1067 aaKnown RBP7.63□□□□□ -1.19
SF3A1-208ENST00000485618 BCORP1Q8N888 145 aa7.63□□□□□ -1.19
SF3A1-208ENST00000485618 COX18Q8N8Q8 333 aa7.63□□□□□ -1.19
SF3A1-208ENST00000485618 ZNF441Q8N8Z8 693 aa7.63□□□□□ -1.19
SF3A1-208ENST00000485618 ZNF527Q8NB42 609 aa7.63□□□□□ -1.19
SF3A1-208ENST00000485618 DOK4Q8TEW6 326 aa7.63□□□□□ -1.19
SF3A1-208ENST00000485618 PMM1Q92871 262 aa7.63□□□□□ -1.19
SF3A1-208ENST00000485618 OMA1Q96E52 524 aa7.63□□□□□ -1.19
SF3A1-208ENST00000485618 FAM120BQ96EK7 910 aaKnown RBP7.63□□□□□ -1.19
SF3A1-208ENST00000485618 SLC35G5Q96KT7 338 aa7.63□□□□□ -1.19
SF3A1-208ENST00000485618 MARK4Q96L34 752 aa7.63□□□□□ -1.19
SF3A1-208ENST00000485618 SLC35A5Q9BS91 424 aa7.63□□□□□ -1.19
SF3A1-208ENST00000485618 LMF2Q9BU23 707 aaKnown RBP7.63□□□□□ -1.19
SF3A1-208ENST00000485618 BTBD2Q9BX70 525 aa7.63□□□□□ -1.19
SF3A1-208ENST00000485618 ITPAQ9BY32 194 aa7.63□□□□□ -1.19
SF3A1-208ENST00000485618 NXF5Q9H1B4 397 aaKnown RBP7.63□□□□□ -1.19
SF3A1-208ENST00000485618 PIGUQ9H490 435 aa7.63□□□□□ -1.19
SF3A1-208ENST00000485618 METTL7AQ9H8H3 244 aa7.63□□□□□ -1.19
SF3A1-208ENST00000485618 ZBTB20Q9HC78 741 aaPredicted RBP7.63□□□□□ -1.19
SF3A1-208ENST00000485618 GID8Q9NWU2 228 aa7.63□□□□□ -1.19
SF3A1-208ENST00000485618 ANKRD10Q9NXR5 420 aa7.63□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms