RNA–Protein interactions for RNA: ENST00000473854.5

CCDC39-203, Transcript of coiled-coil domain containing 39, humanhuman

TSL 2

Gene CCDC39, Length 487 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-203ENST00000473854 FAM205BPQ63HN1 556 aa1.3□□□□□ -2.2
CCDC39-203ENST00000473854 WSCD1Q658N2 575 aa1.3□□□□□ -2.2
CCDC39-203ENST00000473854 ACSM2BQ68CK6 577 aa1.3□□□□□ -2.2
CCDC39-203ENST00000473854 NCBP2-AS2Q69YL0 99 aa1.3□□□□□ -2.2
CCDC39-203ENST00000473854 TWF2Q6IBS0 349 aaKnown RBP1.3□□□□□ -2.2
CCDC39-203ENST00000473854 OR6B2Q6IFH4 312 aa1.3□□□□□ -2.2
CCDC39-203ENST00000473854 CGB2Q6NT52 195 aa1.3□□□□□ -2.2
CCDC39-203ENST00000473854 DCUN1D2Q6PH85 259 aa1.3□□□□□ -2.2
CCDC39-203ENST00000473854 LRRC31Q6UY01 552 aa1.3□□□□□ -2.2
CCDC39-203ENST00000473854 KDM7AQ6ZMT4 941 aa1.3□□□□□ -2.2
CCDC39-203ENST00000473854 BTN2A1Q7KYR7 527 aa1.3□□□□□ -2.2
CCDC39-203ENST00000473854 CHMP1BQ7LBR1 199 aa1.3□□□□□ -2.2
CCDC39-203ENST00000473854 TMEM110Q86TL2 294 aa1.3□□□□□ -2.2
CCDC39-203ENST00000473854 RPAINQ86UA6 219 aa1.3□□□□□ -2.2
CCDC39-203ENST00000473854 TAC4Q86UU9 113 aa1.3□□□□□ -2.2
CCDC39-203ENST00000473854 NLRP14Q86W24 1093 aa1.3□□□□□ -2.2
CCDC39-203ENST00000473854 UNC93AQ86WB7 457 aa1.3□□□□□ -2.2
CCDC39-203ENST00000473854 ERICH1Q86X53 443 aa1.3□□□□□ -2.2
CCDC39-203ENST00000473854 FAM131BQ86XD5 332 aa1.3□□□□□ -2.2
CCDC39-203ENST00000473854 ZFAND4Q86XD8 727 aa1.3□□□□□ -2.2
CCDC39-203ENST00000473854 MAML2Q8IZL2 1156 aaPredicted RBP1.3□□□□□ -2.2
CCDC39-203ENST00000473854 DEFB106AQ8N104 65 aa1.3□□□□□ -2.2
CCDC39-203ENST00000473854 PYROXD2Q8N2H3 581 aa1.3□□□□□ -2.2
CCDC39-203ENST00000473854 NPWQ8N729 165 aa1.3□□□□□ -2.2
CCDC39-203ENST00000473854 NAT8LQ8N9F0 302 aa1.3□□□□□ -2.2
CCDC39-203ENST00000473854 EIF1ADQ8N9N8 165 aaKnown RBP1.3□□□□□ -2.2
CCDC39-203ENST00000473854 TMEM35BQ8NCS4 154 aa1.3□□□□□ -2.2
CCDC39-203ENST00000473854 ACTL9Q8TC94 416 aa1.3□□□□□ -2.2
CCDC39-203ENST00000473854 MRAPQ8TCY5 172 aa1.3□□□□□ -2.2
CCDC39-203ENST00000473854 FAM172AQ8WUF8 416 aa1.3□□□□□ -2.2
CCDC39-203ENST00000473854 DEPDC1BQ8WUY9 529 aa1.3□□□□□ -2.2
CCDC39-203ENST00000473854 UBLCP1Q8WVY7 318 aaPredicted RBP1.3□□□□□ -2.2
CCDC39-203ENST00000473854 RXFP2Q8WXD0 754 aa1.3□□□□□ -2.2
CCDC39-203ENST00000473854 RSPH1Q8WYR4 309 aa1.3□□□□□ -2.2
CCDC39-203ENST00000473854 BADQ92934 168 aa1.3□□□□□ -2.2
CCDC39-203ENST00000473854 ART4Q93070 314 aa1.3□□□□□ -2.2
CCDC39-203ENST00000473854 EXOC4Q96A65 974 aa1.3□□□□□ -2.2
CCDC39-203ENST00000473854 MAGOHBQ96A72 148 aaKnown RBP1.3□□□□□ -2.2
CCDC39-203ENST00000473854 SNF8Q96H20 258 aa1.3□□□□□ -2.2
CCDC39-203ENST00000473854 PCED1BQ96HM7 432 aa1.3□□□□□ -2.2
CCDC39-203ENST00000473854 RBM41Q96IZ5 413 aaKnown RBP1.3□□□□□ -2.2
CCDC39-203ENST00000473854 CAPNS2Q96L46 248 aa1.3□□□□□ -2.2
CCDC39-203ENST00000473854 ATP6V1G3Q96LB4 118 aa1.3□□□□□ -2.2
CCDC39-203ENST00000473854 SENP8Q96LD8 212 aa1.3□□□□□ -2.2
CCDC39-203ENST00000473854 C9orf72Q96LT7 481 aa1.3□□□□□ -2.2
CCDC39-203ENST00000473854 CCDC114Q96M63 670 aa1.3□□□□□ -2.2
CCDC39-203ENST00000473854 CFAP57Q96MR6 1250 aa1.3□□□□□ -2.2
CCDC39-203ENST00000473854 ZNF560Q96MR9 790 aa1.3□□□□□ -2.2
CCDC39-203ENST00000473854 OLFM3Q96PB7 478 aa1.3□□□□□ -2.2
CCDC39-203ENST00000473854 QKIQ96PU8 341 aaKnown RBP eCLIP1.3□□□□□ -2.2
CCDC39-203ENST00000473854 CSPG4P5Q96PW8 444 aa1.3□□□□□ -2.2
CCDC39-203ENST00000473854 NPY6RQ99463 290 aa1.3□□□□□ -2.2
CCDC39-203ENST00000473854 ATF6BQ99941 703 aa1.3□□□□□ -2.2
CCDC39-203ENST00000473854 ADPGKQ9BRR6 497 aa1.3□□□□□ -2.2
CCDC39-203ENST00000473854 ZNF670Q9BS34 389 aa1.3□□□□□ -2.2
CCDC39-203ENST00000473854 CHCHD5Q9BSY4 110 aa1.3□□□□□ -2.2
CCDC39-203ENST00000473854 ULBP1Q9BZM6 244 aa1.3□□□□□ -2.2
CCDC39-203ENST00000473854 VN1R1Q9GZP7 353 aa1.3□□□□□ -2.2
CCDC39-203ENST00000473854 DNAI2Q9GZS0 605 aa1.3□□□□□ -2.2
CCDC39-203ENST00000473854 MIS12Q9H081 205 aa1.3□□□□□ -2.2
CCDC39-203ENST00000473854 RAB17Q9H0T7 212 aa1.3□□□□□ -2.2
CCDC39-203ENST00000473854 TRPV6Q9H1D0 765 aa1.3□□□□□ -2.2
CCDC39-203ENST00000473854 S1PR5Q9H228 398 aa1.3□□□□□ -2.2
CCDC39-203ENST00000473854 LHX5Q9H2C1 402 aa1.3□□□□□ -2.2
CCDC39-203ENST00000473854 PLK3Q9H4B4 646 aa1.3□□□□□ -2.2
CCDC39-203ENST00000473854 ZWILCHQ9H900 591 aa1.3□□□□□ -2.2
CCDC39-203ENST00000473854 UGT1A7Q9HAW7 530 aa1.3□□□□□ -2.2
CCDC39-203ENST00000473854 UGT1A10Q9HAW8 530 aa1.3□□□□□ -2.2
CCDC39-203ENST00000473854 UGT1A8Q9HAW9 530 aa1.3□□□□□ -2.2
CCDC39-203ENST00000473854 CYP3A43Q9HB55 503 aa1.3□□□□□ -2.2
CCDC39-203ENST00000473854 NMUR1Q9HB89 426 aa1.3□□□□□ -2.2
CCDC39-203ENST00000473854 POPDC2Q9HBU9 364 aa1.3□□□□□ -2.2
CCDC39-203ENST00000473854 MRPL47Q9HD33 250 aaKnown RBP1.3□□□□□ -2.2
CCDC39-203ENST00000473854 MED4Q9NPJ6 270 aa1.3□□□□□ -2.2
CCDC39-203ENST00000473854 FAM114A2Q9NRY5 505 aa1.3□□□□□ -2.2
CCDC39-203ENST00000473854 PIGVQ9NUD9 493 aa1.3□□□□□ -2.2
CCDC39-203ENST00000473854 PARVAQ9NVD7 372 aa1.3□□□□□ -2.2
CCDC39-203ENST00000473854 GDAP2Q9NXN4 497 aa1.3□□□□□ -2.2
CCDC39-203ENST00000473854 PSD3Q9NYI0 1048 aa1.3□□□□□ -2.2
CCDC39-203ENST00000473854 ABCD2Q9UBJ2 740 aa1.3□□□□□ -2.2
CCDC39-203ENST00000473854 TBC1D29Q9UFV1 150 aa1.3□□□□□ -2.2
CCDC39-203ENST00000473854 PCSK1NQ9UHG2 260 aa1.3□□□□□ -2.2
CCDC39-203ENST00000473854 LCMT1Q9UIC8 334 aa1.3□□□□□ -2.2
CCDC39-203ENST00000473854 ABT1Q9ULW3 272 aaKnown RBP1.3□□□□□ -2.2
CCDC39-203ENST00000473854 WBP11Q9Y2W2 641 aaKnown RBP1.3□□□□□ -2.2
CCDC39-203ENST00000473854 Q9Y3F1 56 aa1.3□□□□□ -2.2
CCDC39-203ENST00000473854 CMAHPQ9Y471 501 aa1.3□□□□□ -2.2
CCDC39-203ENST00000473854 MTF2Q9Y483 593 aaPredicted RBP1.3□□□□□ -2.2
CCDC39-203ENST00000473854 TTLL3Q9Y4R7 772 aa1.3□□□□□ -2.2
CCDC39-203ENST00000473854 LYVE1Q9Y5Y7 322 aa1.3□□□□□ -2.2
CCDC39-203ENST00000473854 SESN1Q9Y6P5 492 aa1.3□□□□□ -2.2
CCDC39-203ENST00000473854 CACNA1GO43497 2377 aa1.3□□□□□ -2.2
CCDC39-203ENST00000473854 EP300Q09472 2414 aaPredicted RBP1.3□□□□□ -2.2
CCDC39-203ENST00000473854 ZZEF1O43149 2961 aa1.3□□□□□ -2.2
CCDC39-203ENST00000473854 MYO7BQ6PIF6 2116 aa1.3□□□□□ -2.2
CCDC39-203ENST00000473854 ALPK2Q86TB3 2170 aa1.3□□□□□ -2.2
CCDC39-203ENST00000473854 RELNP78509 3460 aa1.3□□□□□ -2.2
CCDC39-203ENST00000473854 DNAJC13O75165 2243 aa1.3□□□□□ -2.2
CCDC39-203ENST00000473854 NBEAQ8NFP9 2946 aa1.29□□□□□ -2.2
CCDC39-203ENST00000473854 DMXL2Q8TDJ6 3036 aa1.29□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms