RNA–Protein interactions for RNA: ENST00000469123.5

SSBP1-208, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 5

Gene SSBP1, Length 662 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-208ENST00000469123 HIVEP3Q5T1R4 2406 aa7.89□□□□□ -1.15
SSBP1-208ENST00000469123 CFLARO15519 480 aa7.88□□□□□ -1.15
SSBP1-208ENST00000469123 PEX1O43933 1283 aa7.88□□□□□ -1.15
SSBP1-208ENST00000469123 HS6ST1O60243 411 aa7.88□□□□□ -1.15
SSBP1-208ENST00000469123 AK1P00568 194 aa7.88□□□□□ -1.15
SSBP1-208ENST00000469123 F10P00742 488 aa7.88□□□□□ -1.15
SSBP1-208ENST00000469123 PGRP06401 933 aa7.88□□□□□ -1.15
SSBP1-208ENST00000469123 ABCB1P08183 1280 aaPredicted RBP7.88□□□□□ -1.15
SSBP1-208ENST00000469123 CT45A8P0DMV1 189 aa7.88□□□□□ -1.15
SSBP1-208ENST00000469123 CT45A9P0DMV2 189 aa7.88□□□□□ -1.15
SSBP1-208ENST00000469123 ZNF24P17028 368 aa7.88□□□□□ -1.15
SSBP1-208ENST00000469123 ELAVL4P26378 380 aaKnown RBP7.88□□□□□ -1.15
SSBP1-208ENST00000469123 IL12BP29460 328 aa7.88□□□□□ -1.15
SSBP1-208ENST00000469123 CCT3P49368 545 aaKnown RBP7.88□□□□□ -1.15
SSBP1-208ENST00000469123 MEOX1P50221 254 aa7.88□□□□□ -1.15
SSBP1-208ENST00000469123 PNLIPRP2P54317 469 aa7.88□□□□□ -1.15
SSBP1-208ENST00000469123 AQP5P55064 265 aa7.88□□□□□ -1.15
SSBP1-208ENST00000469123 MLLT10P55197 1068 aa7.88□□□□□ -1.15
SSBP1-208ENST00000469123 ALDH6A1Q02252 535 aaKnown RBP7.88□□□□□ -1.15
SSBP1-208ENST00000469123 DUSP8Q13202 625 aa7.88□□□□□ -1.15
SSBP1-208ENST00000469123 TP53BP2Q13625 1128 aa7.88□□□□□ -1.15
SSBP1-208ENST00000469123 PRSS53Q2L4Q9 553 aa7.88□□□□□ -1.15
SSBP1-208ENST00000469123 HYAL4Q2M3T9 481 aa7.88□□□□□ -1.15
SSBP1-208ENST00000469123 FAM174BQ3ZCQ3 159 aa7.88□□□□□ -1.15
SSBP1-208ENST00000469123 SPDYE7PQ495Y7 208 aa7.88□□□□□ -1.15
SSBP1-208ENST00000469123 CT45A2Q5DJT8 189 aa7.88□□□□□ -1.15
SSBP1-208ENST00000469123 ANKRD26P1Q6NSI1 321 aa7.88□□□□□ -1.15
SSBP1-208ENST00000469123 SLC30A6Q6NXT4 461 aa7.88□□□□□ -1.15
SSBP1-208ENST00000469123 PAOXQ6QHF9 649 aa7.88□□□□□ -1.15
SSBP1-208ENST00000469123 FAM47EQ6ZV65 393 aa7.88□□□□□ -1.15
SSBP1-208ENST00000469123 MAVSQ7Z434 540 aa7.88□□□□□ -1.15
SSBP1-208ENST00000469123 ZNF227Q86WZ6 799 aa7.88□□□□□ -1.15
SSBP1-208ENST00000469123 SLC44A2Q8IWA5 706 aaPredicted RBP7.88□□□□□ -1.15
SSBP1-208ENST00000469123 SULF2Q8IWU5 870 aa7.88□□□□□ -1.15
SSBP1-208ENST00000469123 EID3Q8N140 333 aa7.88□□□□□ -1.15
SSBP1-208ENST00000469123 KRTCAP2Q8N6L1 136 aa7.88□□□□□ -1.15
SSBP1-208ENST00000469123 GOT1L1Q8NHS2 421 aaPredicted RBP7.88□□□□□ -1.15
SSBP1-208ENST00000469123 SPPL2AQ8TCT8 520 aa7.88□□□□□ -1.15
SSBP1-208ENST00000469123 OIT3Q8WWZ8 545 aa7.88□□□□□ -1.15
SSBP1-208ENST00000469123 OMA1Q96E52 524 aa7.88□□□□□ -1.15
SSBP1-208ENST00000469123 FAM120BQ96EK7 910 aaKnown RBP7.88□□□□□ -1.15
SSBP1-208ENST00000469123 FRMD6Q96NE9 622 aa7.88□□□□□ -1.15
SSBP1-208ENST00000469123 CCDC115Q96NT0 180 aa7.88□□□□□ -1.15
SSBP1-208ENST00000469123 COL21A1Q96P44 957 aa7.88□□□□□ -1.15
SSBP1-208ENST00000469123 G6PC3Q9BUM1 346 aa7.88□□□□□ -1.15
SSBP1-208ENST00000469123 LIN28AQ9H9Z2 209 aaKnown RBP7.88□□□□□ -1.15
SSBP1-208ENST00000469123 IL1RL2Q9HB29 575 aa7.88□□□□□ -1.15
SSBP1-208ENST00000469123 KLHL1Q9NR64 748 aa7.88□□□□□ -1.15
SSBP1-208ENST00000469123 MAP10Q9P2G4 905 aa7.88□□□□□ -1.15
SSBP1-208ENST00000469123 CBLCQ9ULV8 474 aa7.88□□□□□ -1.15
SSBP1-208ENST00000469123 ABCG2Q9UNQ0 655 aa7.88□□□□□ -1.15
SSBP1-208ENST00000469123 SNX8Q9Y5X2 465 aa7.88□□□□□ -1.15
SSBP1-208ENST00000469123 ZNF407Q9C0G0 2248 aa7.88□□□□□ -1.15
SSBP1-208ENST00000469123 HELZ2Q9BYK8 2649 aaKnown RBP7.88□□□□□ -1.15
SSBP1-208ENST00000469123 DIDO1Q9BTC0 2240 aaKnown RBP7.87□□□□□ -1.15
SSBP1-208ENST00000469123 PRRC2CQ9Y520 2896 aaKnown RBP7.87□□□□□ -1.15
SSBP1-208ENST00000469123 FAM234BA2RU67 622 aa7.87□□□□□ -1.15
SSBP1-208ENST00000469123 TFECO14948 347 aaPredicted RBP7.87□□□□□ -1.15
SSBP1-208ENST00000469123 ASNA1O43681 348 aa7.87□□□□□ -1.15
SSBP1-208ENST00000469123 REM1O75628 298 aa7.87□□□□□ -1.15
SSBP1-208ENST00000469123 NKX2-2O95096 273 aa7.87□□□□□ -1.15
SSBP1-208ENST00000469123 C6orf47O95873 294 aa7.87□□□□□ -1.15
SSBP1-208ENST00000469123 VIMP08670 466 aaKnown RBP7.87□□□□□ -1.15
SSBP1-208ENST00000469123 ALOX5P09917 674 aa7.87□□□□□ -1.15
SSBP1-208ENST00000469123 ENDOUP21128 410 aaKnown RBP7.87□□□□□ -1.15
SSBP1-208ENST00000469123 UQCRC2P22695 453 aa7.87□□□□□ -1.15
SSBP1-208ENST00000469123 PIGAP37287 484 aa7.87□□□□□ -1.15
SSBP1-208ENST00000469123 MDH1P40925 334 aaKnown RBP7.87□□□□□ -1.15
SSBP1-208ENST00000469123 MAP3K8P41279 467 aa7.87□□□□□ -1.15
SSBP1-208ENST00000469123 CLK3P49761 638 aaKnown RBP7.87□□□□□ -1.15
SSBP1-208ENST00000469123 IDH3AP50213 366 aa7.87□□□□□ -1.15
SSBP1-208ENST00000469123 CDK9P50750 372 aaKnown RBP7.87□□□□□ -1.15
SSBP1-208ENST00000469123 POLR2JP52435 117 aaKnown RBP7.87□□□□□ -1.15
SSBP1-208ENST00000469123 UFM1P61960 85 aa7.87□□□□□ -1.15
SSBP1-208ENST00000469123 HBA1P69905 142 aa7.87□□□□□ -1.15
SSBP1-208ENST00000469123 PSG6Q00889 435 aa7.87□□□□□ -1.15
SSBP1-208ENST00000469123 SQLEQ14534 574 aa7.87□□□□□ -1.15
SSBP1-208ENST00000469123 CPEB4Q17RY0 729 aaKnown RBP eCLIP7.87□□□□□ -1.15
SSBP1-208ENST00000469123 SPANXN4Q5MJ08 99 aa7.87□□□□□ -1.15
SSBP1-208ENST00000469123 TMEM198Q66K66 360 aa7.87□□□□□ -1.15
SSBP1-208ENST00000469123 OR4F3Q6IEY1 312 aa7.87□□□□□ -1.15
SSBP1-208ENST00000469123 MFSD12Q6NUT3 480 aa7.87□□□□□ -1.15
SSBP1-208ENST00000469123 CDC73Q6P1J9 531 aa7.87□□□□□ -1.15
SSBP1-208ENST00000469123 C16orf47Q6ZP98 133 aaPredicted RBP7.87□□□□□ -1.15
SSBP1-208ENST00000469123 SZRD1Q7Z422 152 aa7.87□□□□□ -1.15
SSBP1-208ENST00000469123 MDGA2Q7Z553 956 aa7.87□□□□□ -1.15
SSBP1-208ENST00000469123 PNPLA5Q7Z6Z6 429 aaPredicted RBP7.87□□□□□ -1.15
SSBP1-208ENST00000469123 PACS2Q86VP3 889 aa7.87□□□□□ -1.15
SSBP1-208ENST00000469123 GHDCQ8N2G8 530 aa7.87□□□□□ -1.15
SSBP1-208ENST00000469123 FAM13CQ8NE31 585 aa7.87□□□□□ -1.15
SSBP1-208ENST00000469123 OR2M7Q8NG81 312 aa7.87□□□□□ -1.15
SSBP1-208ENST00000469123 OR10G3Q8NGC4 313 aa7.87□□□□□ -1.15
SSBP1-208ENST00000469123 OR4A15Q8NGL6 344 aa7.87□□□□□ -1.15
SSBP1-208ENST00000469123 MIPOL1Q8TD10 442 aa7.87□□□□□ -1.15
SSBP1-208ENST00000469123 DOK4Q8TEW6 326 aa7.87□□□□□ -1.15
SSBP1-208ENST00000469123 TSPEARQ8WU66 669 aa7.87□□□□□ -1.15
SSBP1-208ENST00000469123 DIO2Q92813 273 aa7.87□□□□□ -1.15
SSBP1-208ENST00000469123 TMEM41AQ96HV5 264 aa7.87□□□□□ -1.15
SSBP1-208ENST00000469123 ZNF597Q96LX8 424 aa7.87□□□□□ -1.15
SSBP1-208ENST00000469123 OR52B2Q96RD2 323 aa7.87□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms