RNA–Protein interactions for RNA: ENST00000460168.1

HERC4-207, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 2

Gene HERC4, Length 2,215 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-207ENST00000460168 COPS3Q9UNS2 423 aa9.77□□□□□ -0.85
HERC4-207ENST00000460168 WDFY4Q6ZS81 3184 aa9.77□□□□□ -0.85
HERC4-207ENST00000460168 TRBV5-3A0A0A0MS03 114 aa9.76□□□□□ -0.85
HERC4-207ENST00000460168 RNASET2O00584 256 aaKnown RBP9.76□□□□□ -0.85
HERC4-207ENST00000460168 TMPRSS11DO60235 418 aa9.76□□□□□ -0.85
HERC4-207ENST00000460168 SCN2BO60939 215 aa9.76□□□□□ -0.85
HERC4-207ENST00000460168 SCGB1D2O95969 90 aa9.76□□□□□ -0.85
HERC4-207ENST00000460168 OPN1MWP04001 364 aa9.76□□□□□ -0.85
HERC4-207ENST00000460168 PROS1P07225 676 aa9.76□□□□□ -0.85
HERC4-207ENST00000460168 OPN1MW2P0DN77 364 aa9.76□□□□□ -0.85
HERC4-207ENST00000460168 OPN1MW3P0DN78 364 aa9.76□□□□□ -0.85
HERC4-207ENST00000460168 BMP2P12643 396 aa9.76□□□□□ -0.85
HERC4-207ENST00000460168 TDGF1P13385 188 aa9.76□□□□□ -0.85
HERC4-207ENST00000460168 PTPN6P29350 595 aa9.76□□□□□ -0.85
HERC4-207ENST00000460168 EIF2S3P41091 472 aaKnown RBP9.76□□□□□ -0.85
HERC4-207ENST00000460168 CASP3P42574 277 aa9.76□□□□□ -0.85
HERC4-207ENST00000460168 ARRB1P49407 418 aaPredicted RBP9.76□□□□□ -0.85
HERC4-207ENST00000460168 AQP4P55087 323 aa9.76□□□□□ -0.85
HERC4-207ENST00000460168 RAB8AP61006 207 aa9.76□□□□□ -0.85
HERC4-207ENST00000460168 TGM3Q08188 693 aa9.76□□□□□ -0.85
HERC4-207ENST00000460168 PDE7AQ13946 482 aa9.76□□□□□ -0.85
HERC4-207ENST00000460168 GALEQ14376 348 aa9.76□□□□□ -0.85
HERC4-207ENST00000460168 AASDHQ4L235 1098 aaPredicted RBP9.76□□□□□ -0.85
HERC4-207ENST00000460168 ZNF385BQ569K4 471 aa9.76□□□□□ -0.85
HERC4-207ENST00000460168 RUNDC3AQ59EK9 446 aa9.76□□□□□ -0.85
HERC4-207ENST00000460168 FCRL6Q6DN72 434 aa9.76□□□□□ -0.85
HERC4-207ENST00000460168 ZFP1Q6P2D0 407 aa9.76□□□□□ -0.85
HERC4-207ENST00000460168 FBXO42Q6P3S6 717 aa9.76□□□□□ -0.85
HERC4-207ENST00000460168 ABHD17CQ6PCB6 329 aa9.76□□□□□ -0.85
HERC4-207ENST00000460168 RTL4Q6ZR62 310 aa9.76□□□□□ -0.85
HERC4-207ENST00000460168 VN1R4Q7Z5H5 301 aa9.76□□□□□ -0.85
HERC4-207ENST00000460168 ZNF227Q86WZ6 799 aa9.76□□□□□ -0.85
HERC4-207ENST00000460168 MMP21Q8N119 569 aa9.76□□□□□ -0.85
HERC4-207ENST00000460168 OR2T12Q8NG77 320 aa9.76□□□□□ -0.85
HERC4-207ENST00000460168 OR8K5Q8NH50 307 aa9.76□□□□□ -0.85
HERC4-207ENST00000460168 BAHD1Q8TBE0 780 aaPredicted RBP9.76□□□□□ -0.85
HERC4-207ENST00000460168 RERGQ96A58 199 aaPredicted RBP9.76□□□□□ -0.85
HERC4-207ENST00000460168 TM4SF18Q96CE8 201 aa9.76□□□□□ -0.85
HERC4-207ENST00000460168 AICDAQ9GZX7 198 aa9.76□□□□□ -0.85
HERC4-207ENST00000460168 QRSL1Q9H0R6 528 aaKnown RBP9.76□□□□□ -0.85
HERC4-207ENST00000460168 MUC13Q9H3R2 512 aa9.76□□□□□ -0.85
HERC4-207ENST00000460168 IKZF5Q9H5V7 419 aa9.76□□□□□ -0.85
HERC4-207ENST00000460168 TMEM74BQ9NUR3 256 aa9.76□□□□□ -0.85
HERC4-207ENST00000460168 EVA1BQ9NVM1 165 aa9.76□□□□□ -0.85
HERC4-207ENST00000460168 RAB26Q9ULW5 256 aa9.76□□□□□ -0.85
HERC4-207ENST00000460168 SNX11Q9Y5W9 270 aa9.76□□□□□ -0.85
HERC4-207ENST00000460168 NUP214P35658 2090 aaPredicted RBP9.76□□□□□ -0.85
HERC4-207ENST00000460168 BDP1A6H8Y1 2624 aa9.76□□□□□ -0.85
HERC4-207ENST00000460168 HSBP1L1C9JCN9 74 aa9.76□□□□□ -0.85
HERC4-207ENST00000460168 CTDSP2O14595 271 aa9.76□□□□□ -0.85
HERC4-207ENST00000460168 ARPC2O15144 300 aa9.76□□□□□ -0.85
HERC4-207ENST00000460168 PRAMEF10O60809 474 aa9.76□□□□□ -0.85
HERC4-207ENST00000460168 CBR3O75828 277 aa9.76□□□□□ -0.85
HERC4-207ENST00000460168 DDCP20711 480 aa9.76□□□□□ -0.85
HERC4-207ENST00000460168 HIST1H1TP22492 207 aaPredicted RBP9.76□□□□□ -0.85
HERC4-207ENST00000460168 CHMP24386 653 aa9.76□□□□□ -0.85
HERC4-207ENST00000460168 HTR1EP28566 365 aa9.76□□□□□ -0.85
HERC4-207ENST00000460168 GPR3P46089 330 aa9.76□□□□□ -0.85
HERC4-207ENST00000460168 CAPZBP47756 277 aa9.76□□□□□ -0.85
HERC4-207ENST00000460168 LSSP48449 732 aa9.76□□□□□ -0.85
HERC4-207ENST00000460168 RHDQ02161 417 aa9.76□□□□□ -0.85
HERC4-207ENST00000460168 SLC9A5Q14940 896 aa9.76□□□□□ -0.85
HERC4-207ENST00000460168 C14orf28Q4W4Y0 310 aa9.76□□□□□ -0.85
HERC4-207ENST00000460168 ZNF793Q6ZN11 406 aa9.76□□□□□ -0.85
HERC4-207ENST00000460168 PLEKHG7Q6ZR37 379 aa9.76□□□□□ -0.85
HERC4-207ENST00000460168 FJX1Q86VR8 437 aa9.76□□□□□ -0.85
HERC4-207ENST00000460168 PTRH1Q86Y79 214 aaKnown RBP9.76□□□□□ -0.85
HERC4-207ENST00000460168 OR4A15Q8NGL6 344 aa9.76□□□□□ -0.85
HERC4-207ENST00000460168 C12orf43Q96C57 262 aaKnown RBP9.76□□□□□ -0.85
HERC4-207ENST00000460168 CCDC115Q96NT0 180 aa9.76□□□□□ -0.85
HERC4-207ENST00000460168 OR2A5Q96R48 311 aa9.76□□□□□ -0.85
HERC4-207ENST00000460168 ZNF347Q96SE7 839 aa9.76□□□□□ -0.85
HERC4-207ENST00000460168 TBCDQ9BTW9 1192 aa9.76□□□□□ -0.85
HERC4-207ENST00000460168 ZNF416Q9BWM5 594 aa9.76□□□□□ -0.85
HERC4-207ENST00000460168 SLC6A16Q9GZN6 736 aa9.76□□□□□ -0.85
HERC4-207ENST00000460168 CCDC86Q9H6F5 360 aaKnown RBP9.76□□□□□ -0.85
HERC4-207ENST00000460168 COPS7BQ9H9Q2 264 aaPredicted RBP9.76□□□□□ -0.85
HERC4-207ENST00000460168 DDX28Q9NUL7 540 aaKnown RBP9.76□□□□□ -0.85
HERC4-207ENST00000460168 ACOXLQ9NUZ1 547 aa9.76□□□□□ -0.85
HERC4-207ENST00000460168 TEX10Q9NXF1 929 aaPredicted RBP9.76□□□□□ -0.85
HERC4-207ENST00000460168 NPAP1Q9NZP6 1156 aa9.76□□□□□ -0.85
HERC4-207ENST00000460168 SUSD2Q9UGT4 822 aa9.76□□□□□ -0.85
HERC4-207ENST00000460168 BTNL2Q9UIR0 455 aa9.76□□□□□ -0.85
HERC4-207ENST00000460168 POMT2Q9UKY4 750 aa9.76□□□□□ -0.85
HERC4-207ENST00000460168 USP22Q9UPT9 525 aa9.76□□□□□ -0.85
HERC4-207ENST00000460168 AUP1Q9Y679 476 aa9.76□□□□□ -0.85
HERC4-207ENST00000460168 A0A0A6YYD5 115 aa9.75□□□□□ -0.85
HERC4-207ENST00000460168 URADA6NGE7 173 aa9.75□□□□□ -0.85
HERC4-207ENST00000460168 LILRA5A6NI73 299 aa9.75□□□□□ -0.85
HERC4-207ENST00000460168 RHPN2P1A8MT19 583 aa9.75□□□□□ -0.85
HERC4-207ENST00000460168 C4orf51C9J302 202 aa9.75□□□□□ -0.85
HERC4-207ENST00000460168 M0R296 226 aa9.75□□□□□ -0.85
HERC4-207ENST00000460168 CLIC1O00299 241 aa9.75□□□□□ -0.85
HERC4-207ENST00000460168 RRP8O43159 456 aaKnown RBP9.75□□□□□ -0.85
HERC4-207ENST00000460168 FAM58BPP0C7Q3 252 aa9.75□□□□□ -0.85
HERC4-207ENST00000460168 NCK1P16333 377 aa9.75□□□□□ -0.85
HERC4-207ENST00000460168 ATP6V1B2P21281 511 aa9.75□□□□□ -0.85
HERC4-207ENST00000460168 CTSKP43235 329 aa9.75□□□□□ -0.85
HERC4-207ENST00000460168 TSFMP43897 325 aaKnown RBP9.75□□□□□ -0.85
HERC4-207ENST00000460168 OR4D2P58180 307 aa9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms