RNA–Protein interactions for RNA: ENST00000458591.6

SCFD1-203, Transcript of sec1 family domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCFD1, Length 2,359 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-203ENST00000458591 PELI2Q9HAT8 420 aa13.29□□□□□ -0.28
SCFD1-203ENST00000458591 IMP3Q9NV31 184 aaKnown RBP13.29□□□□□ -0.28
SCFD1-203ENST00000458591 KCNK6Q9Y257 313 aa13.29□□□□□ -0.28
SCFD1-203ENST00000458591 LRIT2A6NDA9 550 aa13.28□□□□□ -0.28
SCFD1-203ENST00000458591 PRR23AA6NEV1 266 aa13.28□□□□□ -0.28
SCFD1-203ENST00000458591 FAM183AA6NL82 134 aa13.28□□□□□ -0.28
SCFD1-203ENST00000458591 OR52A4PA6NMU1 304 aa13.28□□□□□ -0.28
SCFD1-203ENST00000458591 CASKO14936 926 aa13.28□□□□□ -0.28
SCFD1-203ENST00000458591 ZIC2O95409 532 aaPredicted RBP13.28□□□□□ -0.28
SCFD1-203ENST00000458591 THY1P04216 161 aa13.28□□□□□ -0.28
SCFD1-203ENST00000458591 ACP2P11117 423 aa13.28□□□□□ -0.28
SCFD1-203ENST00000458591 ERGP11308 486 aa13.28□□□□□ -0.28
SCFD1-203ENST00000458591 MYL9P24844 172 aa13.28□□□□□ -0.28
SCFD1-203ENST00000458591 GPR4P46093 362 aa13.28□□□□□ -0.28
SCFD1-203ENST00000458591 MTNR1AP48039 350 aa13.28□□□□□ -0.28
SCFD1-203ENST00000458591 SLC9A3P48764 834 aa13.28□□□□□ -0.28
SCFD1-203ENST00000458591 TAS2R41P59536 307 aa13.28□□□□□ -0.28
SCFD1-203ENST00000458591 HTRA3P83110 453 aa13.28□□□□□ -0.28
SCFD1-203ENST00000458591 DPTQ07507 201 aa13.28□□□□□ -0.28
SCFD1-203ENST00000458591 ASAH1Q13510 395 aa13.28□□□□□ -0.28
SCFD1-203ENST00000458591 WSCD2Q2TBF2 565 aa13.28□□□□□ -0.28
SCFD1-203ENST00000458591 SLC35F1Q5T1Q4 408 aa13.28□□□□□ -0.28
SCFD1-203ENST00000458591 XKRXQ6PP77 449 aa13.28□□□□□ -0.28
SCFD1-203ENST00000458591 HCAR2Q8TDS4 363 aa13.28□□□□□ -0.28
SCFD1-203ENST00000458591 CXorf40AQ8TE69 158 aa13.28□□□□□ -0.28
SCFD1-203ENST00000458591 FCRL4Q96PJ5 515 aa13.28□□□□□ -0.28
SCFD1-203ENST00000458591 GDF15Q99988 308 aa13.28□□□□□ -0.28
SCFD1-203ENST00000458591 DDX31Q9H8H2 851 aaKnown RBP13.28□□□□□ -0.28
SCFD1-203ENST00000458591 DOCK9Q9BZ29 2069 aa13.28□□□□□ -0.28
SCFD1-203ENST00000458591 A0A1B0GVC2 190 aa13.28□□□□□ -0.28
SCFD1-203ENST00000458591 A6NIN4 97 aa13.28□□□□□ -0.28
SCFD1-203ENST00000458591 MAN2B1O00754 1011 aa13.28□□□□□ -0.28
SCFD1-203ENST00000458591 ERI3O43414 337 aaKnown RBP13.28□□□□□ -0.28
SCFD1-203ENST00000458591 VEGFDO43915 354 aa13.28□□□□□ -0.28
SCFD1-203ENST00000458591 TBX19O60806 448 aa13.28□□□□□ -0.28
SCFD1-203ENST00000458591 FKTNO75072 461 aa13.28□□□□□ -0.28
SCFD1-203ENST00000458591 NR2F6P10588 404 aa13.28□□□□□ -0.28
SCFD1-203ENST00000458591 CERS1P27544 350 aa13.28□□□□□ -0.28
SCFD1-203ENST00000458591 TRIM23P36406 574 aa13.28□□□□□ -0.28
SCFD1-203ENST00000458591 SMSP52788 366 aa13.28□□□□□ -0.28
SCFD1-203ENST00000458591 TAS2R38P59533 333 aa13.28□□□□□ -0.28
SCFD1-203ENST00000458591 CDK3Q00526 305 aa13.28□□□□□ -0.28
SCFD1-203ENST00000458591 ZNF628Q5EBL2 1059 aa13.28□□□□□ -0.28
SCFD1-203ENST00000458591 ZNF311Q5JNZ3 666 aa13.28□□□□□ -0.28
SCFD1-203ENST00000458591 ENTPD8Q5MY95 495 aa13.28□□□□□ -0.28
SCFD1-203ENST00000458591 METRNLQ641Q3 311 aa13.28□□□□□ -0.28
SCFD1-203ENST00000458591 CNIH2Q6PI25 160 aa13.28□□□□□ -0.28
SCFD1-203ENST00000458591 ZNF730Q6ZMV8 503 aa13.28□□□□□ -0.28
SCFD1-203ENST00000458591 QSOX2Q6ZRP7 698 aa13.28□□□□□ -0.28
SCFD1-203ENST00000458591 ERN2Q76MJ5 926 aaKnown RBP13.28□□□□□ -0.28
SCFD1-203ENST00000458591 ZNF438Q7Z4V0 828 aa13.28□□□□□ -0.28
SCFD1-203ENST00000458591 LRRTM4Q86VH4 590 aa13.28□□□□□ -0.28
SCFD1-203ENST00000458591 POF1BQ8WVV4 589 aa13.28□□□□□ -0.28
SCFD1-203ENST00000458591 COX14Q96I36 57 aa13.28□□□□□ -0.28
SCFD1-203ENST00000458591 ZNF514Q96K75 400 aaPredicted RBP13.28□□□□□ -0.28
SCFD1-203ENST00000458591 PRRC1Q96M27 445 aa13.28□□□□□ -0.28
SCFD1-203ENST00000458591 C12orf66Q96MD2 445 aa13.28□□□□□ -0.28
SCFD1-203ENST00000458591 SLC9A8Q9Y2E8 581 aa13.28□□□□□ -0.28
SCFD1-203ENST00000458591 CSNK1G3Q9Y6M4 447 aa13.28□□□□□ -0.28
SCFD1-203ENST00000458591 RANBP2P49792 3224 aaKnown RBP13.27□□□□□ -0.28
SCFD1-203ENST00000458591 NDUFB5O43674 189 aa13.27□□□□□ -0.29
SCFD1-203ENST00000458591 CLTBP09497 229 aa13.27□□□□□ -0.29
SCFD1-203ENST00000458591 CELP19835 753 aa13.27□□□□□ -0.29
SCFD1-203ENST00000458591 SDHBP21912 280 aa13.27□□□□□ -0.29
SCFD1-203ENST00000458591 PPP2R1BP30154 601 aa13.27□□□□□ -0.29
SCFD1-203ENST00000458591 MC3RP41968 323 aa13.27□□□□□ -0.29
SCFD1-203ENST00000458591 RAB25P57735 213 aa13.27□□□□□ -0.29
SCFD1-203ENST00000458591 SMIM11AP58511 58 aa13.27□□□□□ -0.29
SCFD1-203ENST00000458591 STXBP1P61764 594 aaKnown RBP13.27□□□□□ -0.29
SCFD1-203ENST00000458591 C3orf38Q5JPI3 329 aa13.27□□□□□ -0.29
SCFD1-203ENST00000458591 DDI2Q5TDH0 399 aa13.27□□□□□ -0.29
SCFD1-203ENST00000458591 SLC27A4Q6P1M0 643 aa13.27□□□□□ -0.29
SCFD1-203ENST00000458591 SLC36A4Q6YBV0 504 aa13.27□□□□□ -0.29
SCFD1-203ENST00000458591 NOXA1Q86UR1 476 aa13.27□□□□□ -0.29
SCFD1-203ENST00000458591 RDH10Q8IZV5 341 aa13.27□□□□□ -0.29
SCFD1-203ENST00000458591 VWA5B2Q8N398 1253 aa13.27□□□□□ -0.29
SCFD1-203ENST00000458591 OR9A2Q8NGT5 310 aa13.27□□□□□ -0.29
SCFD1-203ENST00000458591 OR2A1Q8NGT9 310 aa13.27□□□□□ -0.29
SCFD1-203ENST00000458591 TEX47Q8TBZ9 253 aa13.27□□□□□ -0.29
SCFD1-203ENST00000458591 ACSS1Q9NUB1 689 aaPredicted RBP13.27□□□□□ -0.29
SCFD1-203ENST00000458591 CXXC1Q9P0U4 656 aaPredicted RBP13.27□□□□□ -0.29
SCFD1-203ENST00000458591 CLCA2Q9UQC9 943 aa13.27□□□□□ -0.29
SCFD1-203ENST00000458591 MAU2Q9Y6X3 613 aa13.27□□□□□ -0.29
SCFD1-203ENST00000458591 LOC105378220A0A1B0GUY1 285 aaPredicted RBP13.27□□□□□ -0.29
SCFD1-203ENST00000458591 NOTOA8MTQ0 251 aa13.27□□□□□ -0.29
SCFD1-203ENST00000458591 SOCS6O14544 535 aa13.27□□□□□ -0.29
SCFD1-203ENST00000458591 SLC30A4O14863 429 aa13.27□□□□□ -0.29
SCFD1-203ENST00000458591 PRODHO43272 600 aa13.27□□□□□ -0.29
SCFD1-203ENST00000458591 UBXN7O94888 489 aa13.27□□□□□ -0.29
SCFD1-203ENST00000458591 ALX3O95076 343 aa13.27□□□□□ -0.29
SCFD1-203ENST00000458591 IL12RB1P42701 662 aa13.27□□□□□ -0.29
SCFD1-203ENST00000458591 SOX9P48436 509 aa13.27□□□□□ -0.29
SCFD1-203ENST00000458591 CTBP2P56545 445 aa13.27□□□□□ -0.29
SCFD1-203ENST00000458591 COX10Q12887 443 aa13.27□□□□□ -0.29
SCFD1-203ENST00000458591 ZNF155Q12901 538 aaPredicted RBP13.27□□□□□ -0.29
SCFD1-203ENST00000458591 GAB4Q2WGN9 574 aa13.27□□□□□ -0.29
SCFD1-203ENST00000458591 RNLSQ5VYX0 342 aa13.27□□□□□ -0.29
SCFD1-203ENST00000458591 MARCH9Q86YJ5 346 aa13.27□□□□□ -0.29
SCFD1-203ENST00000458591 FBXL6Q8N531 539 aa13.27□□□□□ -0.29
SCFD1-203ENST00000458591 CLDN22Q8N7P3 220 aa13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms