RNA–Protein interactions for RNA: ENST00000443016.1

USP6NL-203, Transcript of USP6 N-terminal like, humanhuman

TSL 2

Gene USP6NL, Length 2,491 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-203ENST00000443016 C2orf92A0A1B0GVN3 265 aa8.07□□□□□ -1.12
USP6NL-203ENST00000443016 A0A1W2PPB8 328 aa8.07□□□□□ -1.12
USP6NL-203ENST00000443016 A0A1W2PRS3 328 aa8.07□□□□□ -1.12
USP6NL-203ENST00000443016 PINLYPA6NC86 204 aa8.07□□□□□ -1.12
USP6NL-203ENST00000443016 KIR3DP1A8MWS1 328 aa8.07□□□□□ -1.12
USP6NL-203ENST00000443016 NPIPA2E9PIF3 369 aa8.07□□□□□ -1.12
USP6NL-203ENST00000443016 NPIPA3F8WFD2 350 aa8.07□□□□□ -1.12
USP6NL-203ENST00000443016 PIP5K1BO14986 540 aa8.07□□□□□ -1.12
USP6NL-203ENST00000443016 PGRMC2O15173 223 aa8.07□□□□□ -1.12
USP6NL-203ENST00000443016 SNX3O60493 162 aa8.07□□□□□ -1.12
USP6NL-203ENST00000443016 CLDN14O95500 239 aa8.07□□□□□ -1.12
USP6NL-203ENST00000443016 CCL3P10147 92 aa8.07□□□□□ -1.12
USP6NL-203ENST00000443016 XKP51811 444 aa8.07□□□□□ -1.12
USP6NL-203ENST00000443016 BTKQ06187 659 aa8.07□□□□□ -1.12
USP6NL-203ENST00000443016 SPRED3Q2MJR0 410 aa8.07□□□□□ -1.12
USP6NL-203ENST00000443016 PIGGQ5H8A4 983 aa8.07□□□□□ -1.12
USP6NL-203ENST00000443016 PRAMEF20Q5VT98 475 aa8.07□□□□□ -1.12
USP6NL-203ENST00000443016 CHERPQ8IWX8 916 aaKnown RBP8.07□□□□□ -1.12
USP6NL-203ENST00000443016 TAGAPQ8N103 731 aa8.07□□□□□ -1.12
USP6NL-203ENST00000443016 CCDC197Q8NCU1 140 aa8.07□□□□□ -1.12
USP6NL-203ENST00000443016 OR4K14Q8NGD5 310 aa8.07□□□□□ -1.12
USP6NL-203ENST00000443016 OR5M3Q8NGP4 307 aa8.07□□□□□ -1.12
USP6NL-203ENST00000443016 SPACA9Q96E40 222 aaPredicted RBP8.07□□□□□ -1.12
USP6NL-203ENST00000443016 THOC1Q96FV9 657 aaKnown RBP8.07□□□□□ -1.12
USP6NL-203ENST00000443016 JSRP1Q96MG2 331 aaPredicted RBP8.07□□□□□ -1.12
USP6NL-203ENST00000443016 TMEM120AQ9BXJ8 343 aa8.07□□□□□ -1.12
USP6NL-203ENST00000443016 WWTR1Q9GZV5 400 aa8.07□□□□□ -1.12
USP6NL-203ENST00000443016 TP63Q9H3D4 680 aaPredicted RBP8.07□□□□□ -1.12
USP6NL-203ENST00000443016 MEAF6Q9HAF1 191 aa8.07□□□□□ -1.12
USP6NL-203ENST00000443016 BRF2Q9HAW0 419 aa8.07□□□□□ -1.12
USP6NL-203ENST00000443016 FARSBQ9NSD9 589 aaKnown RBP8.07□□□□□ -1.12
USP6NL-203ENST00000443016 TRIM33Q9UPN9 1127 aa8.07□□□□□ -1.12
USP6NL-203ENST00000443016 CACNA1CQ13936 2221 aa8.07□□□□□ -1.12
USP6NL-203ENST00000443016 A0A1B0GTL3 188 aa8.07□□□□□ -1.12
USP6NL-203ENST00000443016 ATP6AP2A0A1C7CYW4 349 aa8.07□□□□□ -1.12
USP6NL-203ENST00000443016 ERAL1O75616 437 aaKnown RBP8.07□□□□□ -1.12
USP6NL-203ENST00000443016 ATP6AP2O75787 350 aa8.07□□□□□ -1.12
USP6NL-203ENST00000443016 PDYNP01213 254 aa8.07□□□□□ -1.12
USP6NL-203ENST00000443016 NT5EP21589 574 aa8.07□□□□□ -1.12
USP6NL-203ENST00000443016 PIGAP37287 484 aa8.07□□□□□ -1.12
USP6NL-203ENST00000443016 MAGEA5P43359 124 aa8.07□□□□□ -1.12
USP6NL-203ENST00000443016 FOXA1P55317 472 aa8.07□□□□□ -1.12
USP6NL-203ENST00000443016 SLC37A1P57057 533 aa8.07□□□□□ -1.12
USP6NL-203ENST00000443016 FXNQ16595 210 aa8.07□□□□□ -1.12
USP6NL-203ENST00000443016 CGB2Q6NT52 195 aa8.07□□□□□ -1.12
USP6NL-203ENST00000443016 COMMD6Q7Z4G1 85 aa8.07□□□□□ -1.12
USP6NL-203ENST00000443016 FGD2Q7Z6J4 655 aa8.07□□□□□ -1.12
USP6NL-203ENST00000443016 FAM109AQ8N4B1 249 aa8.07□□□□□ -1.12
USP6NL-203ENST00000443016 SLC15A4Q8N697 577 aa8.07□□□□□ -1.12
USP6NL-203ENST00000443016 RFWD2Q8NHY2 731 aa8.07□□□□□ -1.12
USP6NL-203ENST00000443016 UCN3Q969E3 161 aa8.07□□□□□ -1.12
USP6NL-203ENST00000443016 TUBGCP3Q96CW5 907 aa8.07□□□□□ -1.12
USP6NL-203ENST00000443016 PPP3R2Q96LZ3 170 aa8.07□□□□□ -1.12
USP6NL-203ENST00000443016 IL1RL2Q9HB29 575 aa8.07□□□□□ -1.12
USP6NL-203ENST00000443016 TNFRSF12AQ9NP84 129 aa8.07□□□□□ -1.12
USP6NL-203ENST00000443016 TCF7L2Q9NQB0 619 aa8.07□□□□□ -1.12
USP6NL-203ENST00000443016 ADAM29Q9UKF5 820 aa8.07□□□□□ -1.12
USP6NL-203ENST00000443016 PSME2Q9UL46 239 aa8.07□□□□□ -1.12
USP6NL-203ENST00000443016 ARL2BPQ9Y2Y0 163 aa8.07□□□□□ -1.12
USP6NL-203ENST00000443016 GOLGA8QA0A0J9YX86 632 aa8.06□□□□□ -1.12
USP6NL-203ENST00000443016 GOLGA8OA6NCC3 632 aa8.06□□□□□ -1.12
USP6NL-203ENST00000443016 OR6C76A6NM76 312 aa8.06□□□□□ -1.12
USP6NL-203ENST00000443016 GOLGA8NF8WBI6 632 aa8.06□□□□□ -1.12
USP6NL-203ENST00000443016 AHCYL1O43865 530 aa8.06□□□□□ -1.12
USP6NL-203ENST00000443016 SSTR4P31391 388 aa8.06□□□□□ -1.12
USP6NL-203ENST00000443016 PEX19P40855 299 aa8.06□□□□□ -1.12
USP6NL-203ENST00000443016 ALDH9A1P49189 494 aa8.06□□□□□ -1.12
USP6NL-203ENST00000443016 NR0B1P51843 470 aaKnown RBP8.06□□□□□ -1.12
USP6NL-203ENST00000443016 NRG3P56975 720 aa8.06□□□□□ -1.12
USP6NL-203ENST00000443016 TBL3Q12788 808 aaKnown RBP8.06□□□□□ -1.12
USP6NL-203ENST00000443016 MAD2L1Q13257 205 aaPredicted RBP8.06□□□□□ -1.12
USP6NL-203ENST00000443016 SLC10A1Q14973 349 aa8.06□□□□□ -1.12
USP6NL-203ENST00000443016 EBPQ15125 230 aaKnown RBP8.06□□□□□ -1.12
USP6NL-203ENST00000443016 ATP6AP1LQ52LC2 224 aa8.06□□□□□ -1.12
USP6NL-203ENST00000443016 FAM209AQ5JX71 171 aa8.06□□□□□ -1.12
USP6NL-203ENST00000443016 TMEM211Q6ICI0 200 aa8.06□□□□□ -1.12
USP6NL-203ENST00000443016 EPGNQ6UW88 154 aa8.06□□□□□ -1.12
USP6NL-203ENST00000443016 LSRQ86X29 649 aaPredicted RBP8.06□□□□□ -1.12
USP6NL-203ENST00000443016 DND1Q8IYX4 353 aaKnown RBP8.06□□□□□ -1.12
USP6NL-203ENST00000443016 METTL4Q8N3J2 472 aa8.06□□□□□ -1.12
USP6NL-203ENST00000443016 TMEM251Q8N6I4 163 aa8.06□□□□□ -1.12
USP6NL-203ENST00000443016 ARL6IP6Q8N6S5 226 aa8.06□□□□□ -1.12
USP6NL-203ENST00000443016 NAXEQ8NCW5 288 aa8.06□□□□□ -1.12
USP6NL-203ENST00000443016 OR5M9Q8NGP3 310 aa8.06□□□□□ -1.12
USP6NL-203ENST00000443016 CEP70Q8NHQ1 597 aa8.06□□□□□ -1.12
USP6NL-203ENST00000443016 PHF10Q8WUB8 498 aaKnown RBP8.06□□□□□ -1.12
USP6NL-203ENST00000443016 DIO2Q92813 273 aa8.06□□□□□ -1.12
USP6NL-203ENST00000443016 PPP1R36Q96LQ0 422 aa8.06□□□□□ -1.12
USP6NL-203ENST00000443016 DOHHQ9BU89 302 aa8.06□□□□□ -1.12
USP6NL-203ENST00000443016 CCDC28BQ9BUN5 200 aa8.06□□□□□ -1.12
USP6NL-203ENST00000443016 ZDHHC11Q9H8X9 412 aa8.06□□□□□ -1.12
USP6NL-203ENST00000443016 CXorf21Q9HAI6 301 aa8.06□□□□□ -1.12
USP6NL-203ENST00000443016 ALKBH4Q9NXW9 302 aa8.06□□□□□ -1.12
USP6NL-203ENST00000443016 VPS29Q9UBQ0 182 aa8.06□□□□□ -1.12
USP6NL-203ENST00000443016 BOKQ9UMX3 212 aaPredicted RBP8.06□□□□□ -1.12
USP6NL-203ENST00000443016 SEC23IPQ9Y6Y8 1000 aaKnown RBP8.06□□□□□ -1.12
USP6NL-203ENST00000443016 FBN2P35556 2912 aa8.06□□□□□ -1.12
USP6NL-203ENST00000443016 GNG14A0A1W2PPG7 69 aa8.06□□□□□ -1.12
USP6NL-203ENST00000443016 C1orf226A1L170 272 aa8.06□□□□□ -1.12
USP6NL-203ENST00000443016 TRIM64A6NGJ6 449 aa8.06□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms