RNA–Protein interactions for RNA: ENST00000439961.2

SUMO1P3-201, Transcript of SUMO1 pseudogene 3, humanhuman

BASIC

Gene SUMO1P3, Length 304 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO1P3-201ENST00000439961 UCP1P25874 307 aa0.18□□□□□ -2.38
SUMO1P3-201ENST00000439961 MAPK4P31152 587 aa0.18□□□□□ -2.38
SUMO1P3-201ENST00000439961 TIA1P31483 386 aaKnown RBP eCLIP0.18□□□□□ -2.38
SUMO1P3-201ENST00000439961 STIP1P31948 543 aaKnown RBP0.18□□□□□ -2.38
SUMO1P3-201ENST00000439961 SOAT1P35610 550 aa0.18□□□□□ -2.38
SUMO1P3-201ENST00000439961 RPL4P36578 427 aaKnown RBP0.18□□□□□ -2.38
SUMO1P3-201ENST00000439961 CTRLP40313 264 aa0.18□□□□□ -2.38
SUMO1P3-201ENST00000439961 RPS9P46781 194 aaKnown RBP0.18□□□□□ -2.38
SUMO1P3-201ENST00000439961 CRISP1P54107 249 aa0.18□□□□□ -2.38
SUMO1P3-201ENST00000439961 VCPP55072 806 aaKnown RBP0.18□□□□□ -2.38
SUMO1P3-201ENST00000439961 SH3BGRP55822 239 aaPredicted RBP0.18□□□□□ -2.38
SUMO1P3-201ENST00000439961 NOP14P78316 857 aaKnown RBP0.18□□□□□ -2.38
SUMO1P3-201ENST00000439961 ROR1Q01973 937 aa0.18□□□□□ -2.38
SUMO1P3-201ENST00000439961 SLC34A1Q06495 639 aa0.18□□□□□ -2.38
SUMO1P3-201ENST00000439961 ARHGAP1Q07960 439 aa0.18□□□□□ -2.38
SUMO1P3-201ENST00000439961 LCP2Q13094 533 aa0.18□□□□□ -2.38
SUMO1P3-201ENST00000439961 UNC119Q13432 240 aa0.18□□□□□ -2.38
SUMO1P3-201ENST00000439961 IL18R1Q13478 541 aa0.18□□□□□ -2.38
SUMO1P3-201ENST00000439961 EIF2B1Q14232 305 aaKnown RBP0.18□□□□□ -2.38
SUMO1P3-201ENST00000439961 KCTD2Q14681 263 aa0.18□□□□□ -2.38
SUMO1P3-201ENST00000439961 P2RY14Q15391 338 aa0.18□□□□□ -2.38
SUMO1P3-201ENST00000439961 NSDHLQ15738 373 aa0.18□□□□□ -2.38
SUMO1P3-201ENST00000439961 ACKR1Q16570 336 aa0.18□□□□□ -2.38
SUMO1P3-201ENST00000439961 MEA1Q16626 185 aa0.18□□□□□ -2.38
SUMO1P3-201ENST00000439961 CDKN3Q16667 212 aa0.18□□□□□ -2.38
SUMO1P3-201ENST00000439961 COX19Q49B96 90 aa0.18□□□□□ -2.38
SUMO1P3-201ENST00000439961 GPAT3Q53EU6 434 aa0.18□□□□□ -2.38
SUMO1P3-201ENST00000439961 LINC00483Q53H64 154 aa0.18□□□□□ -2.38
SUMO1P3-201ENST00000439961 PIGGQ5H8A4 983 aa0.18□□□□□ -2.38
SUMO1P3-201ENST00000439961 TCP11X2Q5H9J9 407 aa0.18□□□□□ -2.38
SUMO1P3-201ENST00000439961 TMEM255AQ5JRV8 349 aa0.18□□□□□ -2.38
SUMO1P3-201ENST00000439961 HYIQ5T013 277 aa0.18□□□□□ -2.38
SUMO1P3-201ENST00000439961 SPATA1Q5VX52 437 aa0.18□□□□□ -2.38
SUMO1P3-201ENST00000439961 SHEQ5VZ18 495 aa0.18□□□□□ -2.38
SUMO1P3-201ENST00000439961 GALNT17Q6IS24 598 aa0.18□□□□□ -2.38
SUMO1P3-201ENST00000439961 NANOGP8Q6NSW7 305 aa0.18□□□□□ -2.38
SUMO1P3-201ENST00000439961 CASC4Q6P4E1 433 aa0.18□□□□□ -2.38
SUMO1P3-201ENST00000439961 WDR74Q6RFH5 385 aaPredicted RBP0.18□□□□□ -2.38
SUMO1P3-201ENST00000439961 CD164L2Q6UWJ8 174 aa0.18□□□□□ -2.38
SUMO1P3-201ENST00000439961 CWC27Q6UX04 472 aaKnown RBP0.18□□□□□ -2.38
SUMO1P3-201ENST00000439961 C19orf35Q6ZS72 473 aa0.18□□□□□ -2.38
SUMO1P3-201ENST00000439961 BRINP3Q76B58 766 aa0.18□□□□□ -2.38
SUMO1P3-201ENST00000439961 ASRGL1Q7L266 308 aa0.18□□□□□ -2.38
SUMO1P3-201ENST00000439961 CHST3Q7LGC8 479 aa0.18□□□□□ -2.38
SUMO1P3-201ENST00000439961 SPATA21Q7Z572 469 aa0.18□□□□□ -2.38
SUMO1P3-201ENST00000439961 HSD11B1LQ7Z5J1 315 aa0.18□□□□□ -2.38
SUMO1P3-201ENST00000439961 TSEN54Q7Z6J9 526 aaKnown RBP0.18□□□□□ -2.38
SUMO1P3-201ENST00000439961 DNAJB7Q7Z6W7 309 aaPredicted RBP0.18□□□□□ -2.38
SUMO1P3-201ENST00000439961 CAMK2N1Q7Z7J9 78 aa0.18□□□□□ -2.38
SUMO1P3-201ENST00000439961 ADAMTSL2Q86TH1 951 aa0.18□□□□□ -2.38
SUMO1P3-201ENST00000439961 CREBRFQ8IUR6 639 aa0.18□□□□□ -2.38
SUMO1P3-201ENST00000439961 LAX1Q8IWV1 398 aa0.18□□□□□ -2.38
SUMO1P3-201ENST00000439961 IQUBQ8NA54 791 aa0.18□□□□□ -2.38
SUMO1P3-201ENST00000439961 TEX19Q8NA77 164 aa0.18□□□□□ -2.38
SUMO1P3-201ENST00000439961 C20orf203Q8NBC4 194 aa0.18□□□□□ -2.38
SUMO1P3-201ENST00000439961 SIDT2Q8NBJ9 832 aaKnown RBP0.18□□□□□ -2.38
SUMO1P3-201ENST00000439961 CCDC197Q8NCU1 140 aa0.18□□□□□ -2.38
SUMO1P3-201ENST00000439961 TRPV3Q8NET8 790 aa0.18□□□□□ -2.38
SUMO1P3-201ENST00000439961 OR6M1Q8NGM8 313 aa0.18□□□□□ -2.38
SUMO1P3-201ENST00000439961 SPATA18Q8TC71 538 aa0.18□□□□□ -2.38
SUMO1P3-201ENST00000439961 TRAF3IP1Q8TDR0 691 aaPredicted RBP0.18□□□□□ -2.38
SUMO1P3-201ENST00000439961 UBLCP1Q8WVY7 318 aaPredicted RBP0.18□□□□□ -2.38
SUMO1P3-201ENST00000439961 OR1E3Q8WZA6 343 aa0.18□□□□□ -2.38
SUMO1P3-201ENST00000439961 DCUN1D4Q92564 292 aa0.18□□□□□ -2.38
SUMO1P3-201ENST00000439961 PRCCQ92733 491 aaPredicted RBP0.18□□□□□ -2.38
SUMO1P3-201ENST00000439961 FAM46BQ96A09 425 aa0.18□□□□□ -2.38
SUMO1P3-201ENST00000439961 ULK4Q96C45 1275 aa0.18□□□□□ -2.38
SUMO1P3-201ENST00000439961 ERO1AQ96HE7 468 aa0.18□□□□□ -2.38
SUMO1P3-201ENST00000439961 ZNF558Q96NG5 402 aa0.18□□□□□ -2.38
SUMO1P3-201ENST00000439961 PLEKHF1Q96S99 279 aa0.18□□□□□ -2.38
SUMO1P3-201ENST00000439961 CPXM1Q96SM3 734 aa0.18□□□□□ -2.38
SUMO1P3-201ENST00000439961 NPAS2Q99743 824 aa0.18□□□□□ -2.38
SUMO1P3-201ENST00000439961 SSX3Q99909 188 aa0.18□□□□□ -2.38
SUMO1P3-201ENST00000439961 TSSK1BQ9BXA7 367 aa0.18□□□□□ -2.38
SUMO1P3-201ENST00000439961 CHMP4AQ9BY43 222 aa0.18□□□□□ -2.38
SUMO1P3-201ENST00000439961 CARD9Q9H257 536 aa0.18□□□□□ -2.38
SUMO1P3-201ENST00000439961 SPNS1Q9H2V7 528 aa0.18□□□□□ -2.38
SUMO1P3-201ENST00000439961 GORASP2Q9H8Y8 452 aa0.18□□□□□ -2.38
SUMO1P3-201ENST00000439961 COG4Q9H9E3 785 aa0.18□□□□□ -2.38
SUMO1P3-201ENST00000439961 PDE7BQ9NP56 450 aa0.18□□□□□ -2.38
SUMO1P3-201ENST00000439961 GDF3Q9NR23 364 aa0.18□□□□□ -2.38
SUMO1P3-201ENST00000439961 RBM28Q9NW13 759 aaKnown RBP0.18□□□□□ -2.38
SUMO1P3-201ENST00000439961 SOHLH2Q9NX45 425 aa0.18□□□□□ -2.38
SUMO1P3-201ENST00000439961 ELOVL2Q9NXB9 296 aa0.18□□□□□ -2.38
SUMO1P3-201ENST00000439961 C9orf78Q9NZ63 289 aaPredicted RBP0.18□□□□□ -2.38
SUMO1P3-201ENST00000439961 VPS54Q9P1Q0 977 aa0.18□□□□□ -2.38
SUMO1P3-201ENST00000439961 BCCIPQ9P287 314 aaKnown RBP eCLIP0.18□□□□□ -2.38
SUMO1P3-201ENST00000439961 SLC2A6Q9UGQ3 507 aa0.18□□□□□ -2.38
SUMO1P3-201ENST00000439961 OPN4Q9UHM6 478 aa0.18□□□□□ -2.38
SUMO1P3-201ENST00000439961 BTNL2Q9UIR0 455 aa0.18□□□□□ -2.38
SUMO1P3-201ENST00000439961 ANGPTL2Q9UKU9 493 aa0.18□□□□□ -2.38
SUMO1P3-201ENST00000439961 BARX2Q9UMQ3 279 aaPredicted RBP0.18□□□□□ -2.38
SUMO1P3-201ENST00000439961 ITM2BQ9Y287 266 aa0.18□□□□□ -2.38
SUMO1P3-201ENST00000439961 CARHSP1Q9Y2V2 147 aaKnown RBP0.18□□□□□ -2.38
SUMO1P3-201ENST00000439961 IFT52Q9Y366 437 aa0.18□□□□□ -2.38
SUMO1P3-201ENST00000439961 TMED7Q9Y3B3 224 aa0.18□□□□□ -2.38
SUMO1P3-201ENST00000439961 WDR45Q9Y484 360 aa0.18□□□□□ -2.38
SUMO1P3-201ENST00000439961 WIF1Q9Y5W5 379 aa0.18□□□□□ -2.38
SUMO1P3-201ENST00000439961 DYNC1LI1Q9Y6G9 523 aaKnown RBP0.18□□□□□ -2.38
SUMO1P3-201ENST00000439961 FAM169AQ9Y6X4 670 aa0.18□□□□□ -2.38
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms