RNA–Protein interactions for RNA: ENST00000422991.1

COL7A1-202, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 5

Gene COL7A1, Length 597 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-202ENST00000422991 PDGFAP04085 211 aa15.69■□□□□ 0.1
COL7A1-202ENST00000422991 SOX3P41225 446 aa15.69■□□□□ 0.1
COL7A1-202ENST00000422991 MAN2A2P49641 1150 aa15.69■□□□□ 0.1
COL7A1-202ENST00000422991 PSPHP78330 225 aa15.69■□□□□ 0.1
COL7A1-202ENST00000422991 NFYCQ13952 458 aa15.69■□□□□ 0.1
COL7A1-202ENST00000422991 DUSP5Q16690 384 aa15.69■□□□□ 0.1
COL7A1-202ENST00000422991 TRMT5Q32P41 509 aaKnown RBP15.69■□□□□ 0.1
COL7A1-202ENST00000422991 MMEL1Q495T6 779 aa15.69■□□□□ 0.1
COL7A1-202ENST00000422991 LYPD8Q6UX82 237 aa15.69■□□□□ 0.1
COL7A1-202ENST00000422991 SLC44A2Q8IWA5 706 aaPredicted RBP15.69■□□□□ 0.1
COL7A1-202ENST00000422991 TAGAPQ8N103 731 aa15.69■□□□□ 0.1
COL7A1-202ENST00000422991 SLC9A6Q92581 669 aa15.69■□□□□ 0.1
COL7A1-202ENST00000422991 JADE3Q92613 823 aa15.69■□□□□ 0.1
COL7A1-202ENST00000422991 RCN3Q96D15 328 aa15.69■□□□□ 0.1
COL7A1-202ENST00000422991 CMTM5Q96DZ9 223 aa15.69■□□□□ 0.1
COL7A1-202ENST00000422991 OTUB1Q96FW1 271 aaPredicted RBP15.69■□□□□ 0.1
COL7A1-202ENST00000422991 TPT1P8Q9HAU6 139 aa15.69■□□□□ 0.1
COL7A1-202ENST00000422991 VAPAQ9P0L0 249 aa15.69■□□□□ 0.1
COL7A1-202ENST00000422991 FAF1Q9UNN5 650 aaPredicted RBP15.69■□□□□ 0.1
COL7A1-202ENST00000422991 TP53TG5Q9Y2B4 290 aa15.69■□□□□ 0.1
COL7A1-202ENST00000422991 ZNF451Q9Y4E5 1061 aa15.69■□□□□ 0.1
COL7A1-202ENST00000422991 K7EM74 188 aa15.68■□□□□ 0.1
COL7A1-202ENST00000422991 FXYD1O00168 92 aa15.68■□□□□ 0.1
COL7A1-202ENST00000422991 CDK2AP1O14519 115 aa15.68■□□□□ 0.1
COL7A1-202ENST00000422991 OR6B1O95007 311 aa15.68■□□□□ 0.1
COL7A1-202ENST00000422991 KRT75O95678 551 aa15.68■□□□□ 0.1
COL7A1-202ENST00000422991 WDPCPO95876 746 aa15.68■□□□□ 0.1
COL7A1-202ENST00000422991 ALOX5P09917 674 aa15.68■□□□□ 0.1
COL7A1-202ENST00000422991 FBXO45P0C2W1 286 aa15.68■□□□□ 0.1
COL7A1-202ENST00000422991 ABCD3P28288 659 aa15.68■□□□□ 0.1
COL7A1-202ENST00000422991 KHKP50053 298 aa15.68■□□□□ 0.1
COL7A1-202ENST00000422991 ST13P50502 369 aaKnown RBP15.68■□□□□ 0.1
COL7A1-202ENST00000422991 NRG3P56975 720 aa15.68■□□□□ 0.1
COL7A1-202ENST00000422991 TUBA3CQ13748 450 aa15.68■□□□□ 0.1
COL7A1-202ENST00000422991 ZNF468Q5VIY5 522 aaPredicted RBP15.68■□□□□ 0.1
COL7A1-202ENST00000422991 TUBA3EQ6PEY2 450 aa15.68■□□□□ 0.1
COL7A1-202ENST00000422991 IGFL3Q6UXB1 125 aa15.68■□□□□ 0.1
COL7A1-202ENST00000422991 RNF130Q86XS8 419 aa15.68■□□□□ 0.1
COL7A1-202ENST00000422991 PRR22Q8IZ63 422 aa15.68■□□□□ 0.1
COL7A1-202ENST00000422991 SLC34A3Q8N130 599 aa15.68■□□□□ 0.1
COL7A1-202ENST00000422991 EXD3Q8N9H8 876 aa15.68■□□□□ 0.1
COL7A1-202ENST00000422991 C9orf43Q8TAL5 461 aaPredicted RBP15.68■□□□□ 0.1
COL7A1-202ENST00000422991 PNPT1Q8TCS8 783 aaKnown RBP15.68■□□□□ 0.1
COL7A1-202ENST00000422991 GPR151Q8TDV0 419 aa15.68■□□□□ 0.1
COL7A1-202ENST00000422991 ASB15Q8WXK1 588 aa15.68■□□□□ 0.1
COL7A1-202ENST00000422991 OR7D2Q96RA2 312 aa15.68■□□□□ 0.1
COL7A1-202ENST00000422991 STACQ99469 402 aa15.68■□□□□ 0.1
COL7A1-202ENST00000422991 Q9N2J8 555 aa15.68■□□□□ 0.1
COL7A1-202ENST00000422991 DUSP22Q9NRW4 184 aa15.68■□□□□ 0.1
COL7A1-202ENST00000422991 GIN1Q9NXP7 522 aa15.68■□□□□ 0.1
COL7A1-202ENST00000422991 PLA2G3Q9NZ20 509 aa15.68■□□□□ 0.1
COL7A1-202ENST00000422991 NIPSNAP3AQ9UFN0 247 aaPredicted RBP15.68■□□□□ 0.1
COL7A1-202ENST00000422991 OR10H1Q9Y4A9 318 aa15.68■□□□□ 0.1
COL7A1-202ENST00000422991 GMEB1Q9Y692 573 aa15.68■□□□□ 0.1
COL7A1-202ENST00000422991 CNTRLQ7Z7A1 2325 aa15.68■□□□□ 0.1
COL7A1-202ENST00000422991 GXYLT2A0PJZ3 443 aa15.67■□□□□ 0.1
COL7A1-202ENST00000422991 NPPAP01160 153 aa15.67■□□□□ 0.1
COL7A1-202ENST00000422991 MATN1P21941 496 aa15.67■□□□□ 0.1
COL7A1-202ENST00000422991 GABRA3P34903 492 aa15.67■□□□□ 0.1
COL7A1-202ENST00000422991 CASRP41180 1078 aa15.67■□□□□ 0.1
COL7A1-202ENST00000422991 MAGEA8P43361 318 aa15.67■□□□□ 0.1
COL7A1-202ENST00000422991 HLCSP50747 726 aa15.67■□□□□ 0.1
COL7A1-202ENST00000422991 MVDP53602 400 aa15.67■□□□□ 0.1
COL7A1-202ENST00000422991 CASP9P55211 416 aa15.67■□□□□ 0.1
COL7A1-202ENST00000422991 TXNL4AP83876 142 aaKnown RBP15.67■□□□□ 0.1
COL7A1-202ENST00000422991 PLCXD2Q0VAA5 305 aa15.67■□□□□ 0.1
COL7A1-202ENST00000422991 KRT72Q14CN4 511 aa15.67■□□□□ 0.1
COL7A1-202ENST00000422991 CYP27C1Q4G0S4 372 aa15.67■□□□□ 0.1
COL7A1-202ENST00000422991 COX20Q5RI15 118 aa15.67■□□□□ 0.1
COL7A1-202ENST00000422991 TNFAIP8L2Q6P589 184 aaPredicted RBP15.67■□□□□ 0.1
COL7A1-202ENST00000422991 OPN5Q6U736 354 aa15.67■□□□□ 0.1
COL7A1-202ENST00000422991 ANGPTL8Q6UXH0 198 aa15.67■□□□□ 0.1
COL7A1-202ENST00000422991 GPALPP1Q8IXQ4 340 aa15.67■□□□□ 0.1
COL7A1-202ENST00000422991 TMEM156Q8N614 296 aa15.67■□□□□ 0.1
COL7A1-202ENST00000422991 COX18Q8N8Q8 333 aa15.67■□□□□ 0.1
COL7A1-202ENST00000422991 PCYOX1LQ8NBM8 494 aa15.67■□□□□ 0.1
COL7A1-202ENST00000422991 OR4N2Q8NGD1 307 aa15.67■□□□□ 0.1
COL7A1-202ENST00000422991 OR52N2Q8NGI0 321 aa15.67■□□□□ 0.1
COL7A1-202ENST00000422991 OR5D16Q8NGK9 328 aa15.67■□□□□ 0.1
COL7A1-202ENST00000422991 TM9SF4Q92544 642 aa15.67■□□□□ 0.1
COL7A1-202ENST00000422991 PIK3R3Q92569 461 aa15.67■□□□□ 0.1
COL7A1-202ENST00000422991 CDS1Q92903 461 aa15.67■□□□□ 0.1
COL7A1-202ENST00000422991 SPACA9Q96E40 222 aaPredicted RBP15.67■□□□□ 0.1
COL7A1-202ENST00000422991 SLC35A4Q96G79 324 aa15.67■□□□□ 0.1
COL7A1-202ENST00000422991 CGREF1Q99674 301 aa15.67■□□□□ 0.1
COL7A1-202ENST00000422991 CPPED1Q9BRF8 314 aaPredicted RBP15.67■□□□□ 0.1
COL7A1-202ENST00000422991 UTP23Q9BRU9 249 aaKnown RBP15.67■□□□□ 0.1
COL7A1-202ENST00000422991 OR51I1Q9H343 314 aa15.67■□□□□ 0.1
COL7A1-202ENST00000422991 PIGUQ9H490 435 aa15.67■□□□□ 0.1
COL7A1-202ENST00000422991 TRIM45Q9H8W5 580 aaPredicted RBP15.67■□□□□ 0.1
COL7A1-202ENST00000422991 IL1RL2Q9HB29 575 aa15.67■□□□□ 0.1
COL7A1-202ENST00000422991 ARL8BQ9NVJ2 186 aa15.67■□□□□ 0.1
COL7A1-202ENST00000422991 CBLCQ9ULV8 474 aa15.67■□□□□ 0.1
COL7A1-202ENST00000422991 NPFFR2Q9Y5X5 522 aa15.67■□□□□ 0.1
COL7A1-202ENST00000422991 OR5H15A6NDH6 313 aa15.66■□□□□ 0.1
COL7A1-202ENST00000422991 CLIC1O00299 241 aa15.66■□□□□ 0.1
COL7A1-202ENST00000422991 ASNA1O43681 348 aa15.66■□□□□ 0.1
COL7A1-202ENST00000422991 UNC5CO95185 931 aa15.66■□□□□ 0.1
COL7A1-202ENST00000422991 F10P00742 488 aa15.66■□□□□ 0.1
COL7A1-202ENST00000422991 PPIBP23284 216 aaKnown RBP15.66■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms