RNA–Protein interactions for RNA: ENST00000415148.6

CD44-206, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 2,369 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-206ENST00000415148 TSPAN31Q12999 210 aa9.21□□□□□ -0.93
CD44-206ENST00000415148 QPRTQ15274 297 aa9.21□□□□□ -0.93
CD44-206ENST00000415148 TMEM35AQ53FP2 167 aa9.21□□□□□ -0.93
CD44-206ENST00000415148 FAM46CQ5VWP2 391 aa9.21□□□□□ -0.93
CD44-206ENST00000415148 B3GLCTQ6Y288 498 aa9.21□□□□□ -0.93
CD44-206ENST00000415148 RASSF6Q6ZTQ3 369 aa9.21□□□□□ -0.93
CD44-206ENST00000415148 UBE3DQ7Z6J8 389 aa9.21□□□□□ -0.93
CD44-206ENST00000415148 TMCO2Q7Z6W1 182 aaPredicted RBP9.21□□□□□ -0.93
CD44-206ENST00000415148 ZNF485Q8NCK3 441 aa9.21□□□□□ -0.93
CD44-206ENST00000415148 ANKK1Q8NFD2 765 aa9.21□□□□□ -0.93
CD44-206ENST00000415148 RFKQ969G6 155 aa9.21□□□□□ -0.93
CD44-206ENST00000415148 COX14Q96I36 57 aa9.21□□□□□ -0.93
CD44-206ENST00000415148 PRR14Q9BWN1 585 aa9.21□□□□□ -0.93
CD44-206ENST00000415148 FAIM2Q9BWQ8 316 aa9.21□□□□□ -0.93
CD44-206ENST00000415148 GLIPR2Q9H4G4 154 aa9.21□□□□□ -0.93
CD44-206ENST00000415148 PPP1R3EQ9H7J1 279 aa9.21□□□□□ -0.93
CD44-206ENST00000415148 GALNT9Q9HCQ5 603 aa9.21□□□□□ -0.93
CD44-206ENST00000415148 SLC35C2Q9NQQ7 365 aa9.21□□□□□ -0.93
CD44-206ENST00000415148 PCDH10Q9P2E7 1040 aa9.21□□□□□ -0.93
CD44-206ENST00000415148 NLKQ9UBE8 527 aa9.21□□□□□ -0.93
CD44-206ENST00000415148 TRPC4Q9UBN4 977 aa9.21□□□□□ -0.93
CD44-206ENST00000415148 PRKAG2Q9UGJ0 569 aa9.21□□□□□ -0.93
CD44-206ENST00000415148 WNT6Q9Y6F9 365 aa9.21□□□□□ -0.93
CD44-206ENST00000415148 LOC102723532A0A0G2JNH3 316 aa9.21□□□□□ -0.94
CD44-206ENST00000415148 C12orf71A8MTZ7 269 aa9.21□□□□□ -0.94
CD44-206ENST00000415148 GTPBP1O00178 669 aaKnown RBP9.21□□□□□ -0.94
CD44-206ENST00000415148 CHST10O43529 356 aa9.21□□□□□ -0.94
CD44-206ENST00000415148 EPPINO95925 133 aa9.21□□□□□ -0.94
CD44-206ENST00000415148 FAM157BP0CG42 384 aa9.21□□□□□ -0.94
CD44-206ENST00000415148 PSKH1P11801 424 aa9.21□□□□□ -0.94
CD44-206ENST00000415148 ERP29P30040 261 aaKnown RBP9.21□□□□□ -0.94
CD44-206ENST00000415148 EVI2BP34910 448 aa9.21□□□□□ -0.94
CD44-206ENST00000415148 AGFG1P52594 562 aaKnown RBP9.21□□□□□ -0.94
CD44-206ENST00000415148 ARFIP1P53367 373 aa9.21□□□□□ -0.94
CD44-206ENST00000415148 FABP5Q01469 135 aa9.21□□□□□ -0.94
CD44-206ENST00000415148 GPR19Q15760 415 aa9.21□□□□□ -0.94
CD44-206ENST00000415148 BTBD16Q32M84 506 aa9.21□□□□□ -0.94
CD44-206ENST00000415148 METRNLQ641Q3 311 aa9.21□□□□□ -0.94
CD44-206ENST00000415148 SIGIRRQ6IA17 410 aa9.21□□□□□ -0.94
CD44-206ENST00000415148 MZT2AQ6P582 158 aa9.21□□□□□ -0.94
CD44-206ENST00000415148 ERN2Q76MJ5 926 aaKnown RBP9.21□□□□□ -0.94
CD44-206ENST00000415148 KIF18BQ86Y91 864 aa9.21□□□□□ -0.94
CD44-206ENST00000415148 SIX5Q8N196 739 aa9.21□□□□□ -0.94
CD44-206ENST00000415148 POGLUT1Q8NBL1 392 aa9.21□□□□□ -0.94
CD44-206ENST00000415148 C19orf18Q8NEA5 215 aa9.21□□□□□ -0.94
CD44-206ENST00000415148 TTLQ8NG68 377 aa9.21□□□□□ -0.94
CD44-206ENST00000415148 OR6T1Q8NGN1 323 aa9.21□□□□□ -0.94
CD44-206ENST00000415148 OR5H6Q8NGV6 325 aa9.21□□□□□ -0.94
CD44-206ENST00000415148 ENKURQ8TC29 256 aa9.21□□□□□ -0.94
CD44-206ENST00000415148 ZFAND1Q8TCF1 268 aa9.21□□□□□ -0.94
CD44-206ENST00000415148 DEDD2Q8WXF8 326 aa9.21□□□□□ -0.94
CD44-206ENST00000415148 OR8D1Q8WZ84 308 aa9.21□□□□□ -0.94
CD44-206ENST00000415148 ARRDC3Q96B67 414 aa9.21□□□□□ -0.94
CD44-206ENST00000415148 GFM1Q96RP9 751 aaKnown RBP9.21□□□□□ -0.94
CD44-206ENST00000415148 MENTQ9BUN1 341 aa9.21□□□□□ -0.94
CD44-206ENST00000415148 ACAT2Q9BWD1 397 aa9.21□□□□□ -0.94
CD44-206ENST00000415148 TEX12Q9BXU0 123 aa9.21□□□□□ -0.94
CD44-206ENST00000415148 GON7Q9BXV9 100 aa9.21□□□□□ -0.94
CD44-206ENST00000415148 PLA2G12AQ9BZM1 189 aa9.21□□□□□ -0.94
CD44-206ENST00000415148 ZCCHC3Q9NUD5 404 aaKnown RBP9.21□□□□□ -0.94
CD44-206ENST00000415148 MED17Q9NVC6 651 aa9.21□□□□□ -0.94
CD44-206ENST00000415148 TEX10Q9NXF1 929 aaPredicted RBP9.21□□□□□ -0.94
CD44-206ENST00000415148 PHF11Q9UIL8 331 aa9.21□□□□□ -0.94
CD44-206ENST00000415148 PLAGL1Q9UM63 463 aa9.21□□□□□ -0.94
CD44-206ENST00000415148 GPR52Q9Y2T5 361 aa9.21□□□□□ -0.94
CD44-206ENST00000415148 IRAK3Q9Y616 596 aa9.21□□□□□ -0.94
CD44-206ENST00000415148 WASHC1A8K0Z3 465 aa9.2□□□□□ -0.94
CD44-206ENST00000415148 RHOP08100 348 aa9.2□□□□□ -0.94
CD44-206ENST00000415148 LIMS3P0CW19 117 aa9.2□□□□□ -0.94
CD44-206ENST00000415148 LIMS4P0CW20 117 aa9.2□□□□□ -0.94
CD44-206ENST00000415148 ADRB3P13945 408 aa9.2□□□□□ -0.94
CD44-206ENST00000415148 POU3F3P20264 500 aaPredicted RBP9.2□□□□□ -0.94
CD44-206ENST00000415148 NTSP30990 170 aa9.2□□□□□ -0.94
CD44-206ENST00000415148 IFNA8P32881 189 aa9.2□□□□□ -0.94
CD44-206ENST00000415148 TAS2R38P59533 333 aa9.2□□□□□ -0.94
CD44-206ENST00000415148 DSG2Q14126 1118 aa9.2□□□□□ -0.94
CD44-206ENST00000415148 TRAM2Q15035 370 aa9.2□□□□□ -0.94
CD44-206ENST00000415148 DHCR24Q15392 516 aa9.2□□□□□ -0.94
CD44-206ENST00000415148 CNIH2Q6PI25 160 aa9.2□□□□□ -0.94
CD44-206ENST00000415148 PLET1Q6UQ28 207 aa9.2□□□□□ -0.94
CD44-206ENST00000415148 ADAMTSL4Q6UY14 1074 aa9.2□□□□□ -0.94
CD44-206ENST00000415148 WASH2PQ6VEQ5 465 aa9.2□□□□□ -0.94
CD44-206ENST00000415148 PRICKLE2Q7Z3G6 844 aa9.2□□□□□ -0.94
CD44-206ENST00000415148 PEX5LQ8IYB4 626 aa9.2□□□□□ -0.94
CD44-206ENST00000415148 RAB42Q8N4Z0 105 aa9.2□□□□□ -0.94
CD44-206ENST00000415148 SLC9A6Q92581 669 aa9.2□□□□□ -0.94
CD44-206ENST00000415148 DPH7Q9BTV6 452 aa9.2□□□□□ -0.94
CD44-206ENST00000415148 JAM3Q9BX67 310 aa9.2□□□□□ -0.94
CD44-206ENST00000415148 HDHD5Q9BXW7 423 aa9.2□□□□□ -0.94
CD44-206ENST00000415148 CREBZFQ9NS37 354 aa9.2□□□□□ -0.94
CD44-206ENST00000415148 CUEDC1Q9NWM3 386 aaPredicted RBP9.2□□□□□ -0.94
CD44-206ENST00000415148 ASB6Q9NWX5 421 aa9.2□□□□□ -0.94
CD44-206ENST00000415148 ADAM30Q9UKF2 790 aa9.2□□□□□ -0.94
CD44-206ENST00000415148 EXOGQ9Y2C4 368 aaKnown RBP9.2□□□□□ -0.94
CD44-206ENST00000415148 ZBTB32Q9Y2Y4 487 aaPredicted RBP9.2□□□□□ -0.94
CD44-206ENST00000415148 ASB4Q9Y574 426 aa9.2□□□□□ -0.94
CD44-206ENST00000415148 GOLGA4Q13439 2230 aaKnown RBP9.2□□□□□ -0.94
CD44-206ENST00000415148 LRRK1Q38SD2 2015 aa9.2□□□□□ -0.94
CD44-206ENST00000415148 A0A087WUU8 490 aa9.2□□□□□ -0.94
CD44-206ENST00000415148 EDDM13A0A1B0GTR0 161 aa9.2□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms