RNA–Protein interactions for RNA: ENST00000409368.5

SUMO1-206, Transcript of small ubiquitin-like modifier 1, humanhuman

TSL 4 BASIC

Gene SUMO1, Length 1,187 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO1-206ENST00000409368 TMEM114B3SHH9 223 aa11.83□□□□□ -0.52
SUMO1-206ENST00000409368 UPK1AO00322 258 aa11.83□□□□□ -0.52
SUMO1-206ENST00000409368 ZNHIT1O43257 154 aa11.83□□□□□ -0.52
SUMO1-206ENST00000409368 CDC40O60508 579 aaKnown RBP eCLIP11.83□□□□□ -0.52
SUMO1-206ENST00000409368 UGT2B11O75310 529 aa11.83□□□□□ -0.52
SUMO1-206ENST00000409368 ZWINTO95229 277 aa11.83□□□□□ -0.52
SUMO1-206ENST00000409368 SERPINE1P05121 402 aa11.83□□□□□ -0.52
SUMO1-206ENST00000409368 TPOP07202 933 aa11.83□□□□□ -0.52
SUMO1-206ENST00000409368 ESRRAP11474 423 aaPredicted RBP11.83□□□□□ -0.52
SUMO1-206ENST00000409368 BCKDHAP12694 445 aa11.83□□□□□ -0.52
SUMO1-206ENST00000409368 NTSP30990 170 aa11.83□□□□□ -0.52
SUMO1-206ENST00000409368 CDK9P50750 372 aaKnown RBP11.83□□□□□ -0.52
SUMO1-206ENST00000409368 NCBP2P52298 156 aaKnown RBP eCLIP11.83□□□□□ -0.528e-17■■□□□ 12.8
SUMO1-206ENST00000409368 SLC18A1P54219 525 aa11.83□□□□□ -0.52
SUMO1-206ENST00000409368 PNLIPRP2P54317 469 aa11.83□□□□□ -0.52
SUMO1-206ENST00000409368 PLCXD2Q0VAA5 305 aa11.83□□□□□ -0.52
SUMO1-206ENST00000409368 MPP2Q14168 576 aa11.83□□□□□ -0.52
SUMO1-206ENST00000409368 MLC1Q15049 377 aa11.83□□□□□ -0.52
SUMO1-206ENST00000409368 CYP27C1Q4G0S4 372 aa11.83□□□□□ -0.52
SUMO1-206ENST00000409368 GXYLT1Q4G148 440 aa11.83□□□□□ -0.52
SUMO1-206ENST00000409368 EXOSC6Q5RKV6 272 aaKnown RBP11.83□□□□□ -0.52
SUMO1-206ENST00000409368 SH2D4BQ5SQS7 431 aa11.83□□□□□ -0.52
SUMO1-206ENST00000409368 HIST2H2BCQ6DN03 193 aa11.83□□□□□ -0.52
SUMO1-206ENST00000409368 TMEM211Q6ICI0 200 aa11.83□□□□□ -0.52
SUMO1-206ENST00000409368 PACS2Q86VP3 889 aa11.83□□□□□ -0.52
SUMO1-206ENST00000409368 NUDCD3Q8IVD9 361 aa11.83□□□□□ -0.52
SUMO1-206ENST00000409368 KIRREL3Q8IZU9 778 aa11.83□□□□□ -0.52
SUMO1-206ENST00000409368 NEIL3Q8TAT5 605 aa11.83□□□□□ -0.52
SUMO1-206ENST00000409368 SARAFQ96BY9 339 aa11.83□□□□□ -0.52
SUMO1-206ENST00000409368 COL21A1Q96P44 957 aa11.83□□□□□ -0.52
SUMO1-206ENST00000409368 NODALQ96S42 347 aa11.83□□□□□ -0.52
SUMO1-206ENST00000409368 TREX2Q9BQ50 279 aaPredicted RBP11.83□□□□□ -0.52
SUMO1-206ENST00000409368 LMF2Q9BU23 707 aaKnown RBP11.83□□□□□ -0.52
SUMO1-206ENST00000409368 ANKRA2Q9H9E1 313 aa11.83□□□□□ -0.52
SUMO1-206ENST00000409368 CHST11Q9NPF2 352 aa11.83□□□□□ -0.52
SUMO1-206ENST00000409368 PFDN4Q9NQP4 134 aa11.83□□□□□ -0.52
SUMO1-206ENST00000409368 ASIC5Q9NY37 505 aa11.83□□□□□ -0.52
SUMO1-206ENST00000409368 ATP6V1HQ9UI12 483 aa11.83□□□□□ -0.52
SUMO1-206ENST00000409368 SH3BGRL2Q9UJC5 107 aa11.83□□□□□ -0.52
SUMO1-206ENST00000409368 MED12Q93074 2177 aa11.82□□□□□ -0.52
SUMO1-206ENST00000409368 ATP6AP2A0A1C7CYW4 349 aa11.82□□□□□ -0.52
SUMO1-206ENST00000409368 WDR1O75083 606 aa11.82□□□□□ -0.52
SUMO1-206ENST00000409368 ICOSLGO75144 302 aa11.82□□□□□ -0.52
SUMO1-206ENST00000409368 ATP6AP2O75787 350 aa11.82□□□□□ -0.52
SUMO1-206ENST00000409368 CLDN14O95500 239 aa11.82□□□□□ -0.52
SUMO1-206ENST00000409368 JUNP05412 331 aaKnown RBP11.82□□□□□ -0.52
SUMO1-206ENST00000409368 GRK2P25098 689 aa11.82□□□□□ -0.52
SUMO1-206ENST00000409368 COL8A1P27658 744 aa11.82□□□□□ -0.52
SUMO1-206ENST00000409368 MAPK1P28482 360 aa11.82□□□□□ -0.52
SUMO1-206ENST00000409368 PTPN6P29350 595 aa11.82□□□□□ -0.52
SUMO1-206ENST00000409368 PTGER4P35408 488 aa11.82□□□□□ -0.52
SUMO1-206ENST00000409368 MC3RP41968 323 aa11.82□□□□□ -0.52
SUMO1-206ENST00000409368 MAN2A2P49641 1150 aa11.82□□□□□ -0.52
SUMO1-206ENST00000409368 GAS1P54826 345 aa11.82□□□□□ -0.52
SUMO1-206ENST00000409368 CORO7P57737 925 aa11.82□□□□□ -0.52
SUMO1-206ENST00000409368 RPL38P63173 70 aaKnown RBP11.82□□□□□ -0.52
SUMO1-206ENST00000409368 EFR3AQ14156 821 aa11.82□□□□□ -0.52
SUMO1-206ENST00000409368 ZNF385BQ569K4 471 aa11.82□□□□□ -0.52
SUMO1-206ENST00000409368 C6orf136Q5SQH8 315 aa11.82□□□□□ -0.52
SUMO1-206ENST00000409368 BEND6Q5SZJ8 279 aaPredicted RBP11.82□□□□□ -0.52
SUMO1-206ENST00000409368 CEP85LQ5SZL2 805 aa11.82□□□□□ -0.52
SUMO1-206ENST00000409368 BICRALQ6AI39 1079 aa11.82□□□□□ -0.52
SUMO1-206ENST00000409368 ACAD11Q709F0 780 aa11.82□□□□□ -0.52
SUMO1-206ENST00000409368 R3HCC1LQ7Z5L2 792 aaKnown RBP11.82□□□□□ -0.52
SUMO1-206ENST00000409368 LRRC34Q8IZ02 419 aa11.82□□□□□ -0.52
SUMO1-206ENST00000409368 PRR22Q8IZ63 422 aa11.82□□□□□ -0.52
SUMO1-206ENST00000409368 PSMA8Q8TAA3 256 aa11.82□□□□□ -0.52
SUMO1-206ENST00000409368 TMBIM1Q969X1 311 aa11.82□□□□□ -0.52
SUMO1-206ENST00000409368 ZBED6CLQ96FA7 236 aaPredicted RBP11.82□□□□□ -0.52
SUMO1-206ENST00000409368 C3orf30Q96M34 536 aa11.82□□□□□ -0.52
SUMO1-206ENST00000409368 PNPLA3Q9NST1 481 aa11.82□□□□□ -0.52
SUMO1-206ENST00000409368 SPRR3Q9UBC9 169 aa11.82□□□□□ -0.52
SUMO1-206ENST00000409368 MRPS18CQ9Y3D5 142 aaKnown RBP11.82□□□□□ -0.52
SUMO1-206ENST00000409368 FAM215AQ9Y5M1 114 aa11.82□□□□□ -0.52
SUMO1-206ENST00000409368 INTS1Q8N201 2190 aaKnown RBP11.82□□□□□ -0.52
SUMO1-206ENST00000409368 ANKHD1Q8IWZ3 2542 aaKnown RBP11.82□□□□□ -0.52
SUMO1-206ENST00000409368 PRAMEF25A6NGN4 478 aa11.81□□□□□ -0.52
SUMO1-206ENST00000409368 FIGNL2A6NMB9 653 aa11.81□□□□□ -0.52
SUMO1-206ENST00000409368 NPIPA2E9PIF3 369 aa11.81□□□□□ -0.52
SUMO1-206ENST00000409368 NPIPA3F8WFD2 350 aa11.81□□□□□ -0.52
SUMO1-206ENST00000409368 PDPK1O15530 556 aa11.81□□□□□ -0.52
SUMO1-206ENST00000409368 LYPLA1O75608 230 aaPredicted RBP11.81□□□□□ -0.52
SUMO1-206ENST00000409368 PDE9AO76083 593 aa11.81□□□□□ -0.52
SUMO1-206ENST00000409368 PRPS2P11908 318 aa11.81□□□□□ -0.52
SUMO1-206ENST00000409368 GABRA1P14867 456 aa11.81□□□□□ -0.52
SUMO1-206ENST00000409368 DDX5P17844 614 aaKnown RBP11.81□□□□□ -0.52
SUMO1-206ENST00000409368 ACVR2AP27037 513 aa11.81□□□□□ -0.52
SUMO1-206ENST00000409368 RPL3P39023 403 aaKnown RBP11.81□□□□□ -0.52
SUMO1-206ENST00000409368 MRPS22P82650 360 aaKnown RBP11.81□□□□□ -0.52
SUMO1-206ENST00000409368 CRYZQ08257 329 aaKnown RBP11.81□□□□□ -0.52
SUMO1-206ENST00000409368 CDSNQ15517 529 aa11.81□□□□□ -0.52
SUMO1-206ENST00000409368 NNATQ16517 81 aa11.81□□□□□ -0.52
SUMO1-206ENST00000409368 ZNF787Q6DD87 383 aa11.81□□□□□ -0.52
SUMO1-206ENST00000409368 VASNQ6EMK4 673 aa11.81□□□□□ -0.52
SUMO1-206ENST00000409368 RTL6Q6ICC9 239 aa11.81□□□□□ -0.52
SUMO1-206ENST00000409368 RIMKLAQ8IXN7 391 aa11.81□□□□□ -0.52
SUMO1-206ENST00000409368 DDIASQ8IXT1 998 aa11.81□□□□□ -0.52
SUMO1-206ENST00000409368 NATD1Q8N6N6 113 aa11.81□□□□□ -0.52
SUMO1-206ENST00000409368 WDSUB1Q8N9V3 476 aa11.81□□□□□ -0.52
SUMO1-206ENST00000409368 OR5M3Q8NGP4 307 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms