RNA–Protein interactions for RNA: ENST00000399022.8

RPRD1A-202, Transcript of regulation of nuclear pre-mRNA domain containing 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPRD1A, Length 4,438 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1A-202ENST00000399022 C11orf49Q9H6J7 331 aa13.84□□□□□ -0.19
RPRD1A-202ENST00000399022 IL20RAQ9UHF4 553 aa13.84□□□□□ -0.19
RPRD1A-202ENST00000399022 NOP16Q9Y3C1 178 aaKnown RBP13.84□□□□□ -0.19
RPRD1A-202ENST00000399022 LOC100509620A0A075B734 347 aa13.84□□□□□ -0.19
RPRD1A-202ENST00000399022 A0A1B0GTL3 188 aa13.84□□□□□ -0.19
RPRD1A-202ENST00000399022 F5H0A9 414 aaPredicted RBP13.84□□□□□ -0.19
RPRD1A-202ENST00000399022 ALPPP05187 535 aa13.84□□□□□ -0.19
RPRD1A-202ENST00000399022 CST5P28325 142 aaPredicted RBP13.84□□□□□ -0.19
RPRD1A-202ENST00000399022 PTPN6P29350 595 aa13.84□□□□□ -0.19
RPRD1A-202ENST00000399022 SLC19A1P41440 591 aa13.84□□□□□ -0.19
RPRD1A-202ENST00000399022 TPMTP51580 245 aa13.84□□□□□ -0.19
RPRD1A-202ENST00000399022 ERVK-21P61565 698 aa13.84□□□□□ -0.19
RPRD1A-202ENST00000399022 PSPHP78330 225 aa13.84□□□□□ -0.19
RPRD1A-202ENST00000399022 PYHIN1Q6K0P9 492 aa13.84□□□□□ -0.19
RPRD1A-202ENST00000399022 IL20RBQ6UXL0 311 aa13.84□□□□□ -0.19
RPRD1A-202ENST00000399022 S100A16Q96FQ6 103 aaKnown RBP13.84□□□□□ -0.19
RPRD1A-202ENST00000399022 NIPSNAP1Q9BPW8 284 aa13.84□□□□□ -0.19
RPRD1A-202ENST00000399022 SLC46A2Q9BY10 475 aa13.84□□□□□ -0.19
RPRD1A-202ENST00000399022 CARS2Q9HA77 564 aaKnown RBP13.84□□□□□ -0.19
RPRD1A-202ENST00000399022 MRPS30Q9NP92 439 aaKnown RBP13.84□□□□□ -0.19
RPRD1A-202ENST00000399022 SOHLH2Q9NX45 425 aa13.84□□□□□ -0.19
RPRD1A-202ENST00000399022 NUBP2Q9Y5Y2 271 aa13.84□□□□□ -0.19
RPRD1A-202ENST00000399022 NINQ8N4C6 2090 aa13.84□□□□□ -0.19
RPRD1A-202ENST00000399022 RGS13O14921 159 aa13.83□□□□□ -0.19
RPRD1A-202ENST00000399022 SCG5P05408 212 aa13.83□□□□□ -0.19
RPRD1A-202ENST00000399022 NUDT1P36639 197 aa13.83□□□□□ -0.19
RPRD1A-202ENST00000399022 PIN1Q13526 163 aaPredicted RBP13.83□□□□□ -0.19
RPRD1A-202ENST00000399022 NKG7Q16617 165 aa13.83□□□□□ -0.19
RPRD1A-202ENST00000399022 PRSS36Q5K4E3 855 aa13.83□□□□□ -0.19
RPRD1A-202ENST00000399022 OR8K3Q8NH51 312 aa13.83□□□□□ -0.19
RPRD1A-202ENST00000399022 TRMT10AQ8TBZ6 339 aaKnown RBP13.83□□□□□ -0.19
RPRD1A-202ENST00000399022 CCDC107Q8WV48 283 aa13.83□□□□□ -0.19
RPRD1A-202ENST00000399022 ZNF566Q969W8 418 aa13.83□□□□□ -0.19
RPRD1A-202ENST00000399022 ZNF416Q9BWM5 594 aa13.83□□□□□ -0.19
RPRD1A-202ENST00000399022 SLC12A9Q9BXP2 914 aa13.83□□□□□ -0.19
RPRD1A-202ENST00000399022 ARID1BQ8NFD5 2236 aaPredicted RBP13.83□□□□□ -0.2
RPRD1A-202ENST00000399022 URADA6NGE7 173 aa13.83□□□□□ -0.2
RPRD1A-202ENST00000399022 IL3P08700 152 aa13.83□□□□□ -0.2
RPRD1A-202ENST00000399022 TIA1P31483 386 aaKnown RBP eCLIP13.83□□□□□ -0.27e-7■■■■□ 20.5
RPRD1A-202ENST00000399022 TM4SF4P48230 202 aa13.83□□□□□ -0.2
RPRD1A-202ENST00000399022 TGM4P49221 684 aa13.83□□□□□ -0.2
RPRD1A-202ENST00000399022 ST3GAL3Q11203 375 aa13.83□□□□□ -0.2
RPRD1A-202ENST00000399022 CLVS2Q5SYC1 327 aa13.83□□□□□ -0.2
RPRD1A-202ENST00000399022 ZCCHC12Q6PEW1 402 aa13.83□□□□□ -0.2
RPRD1A-202ENST00000399022 PEG10Q86TG7 708 aaKnown RBP13.83□□□□□ -0.2
RPRD1A-202ENST00000399022 MEX3DQ86XN8 651 aaKnown RBP13.83□□□□□ -0.2
RPRD1A-202ENST00000399022 SLC39A11Q8N1S5 342 aa13.83□□□□□ -0.2
RPRD1A-202ENST00000399022 ACBD7Q8N6N7 88 aa13.83□□□□□ -0.2
RPRD1A-202ENST00000399022 CHST4Q8NCG5 386 aa13.83□□□□□ -0.2
RPRD1A-202ENST00000399022 TSEN15Q8WW01 171 aaKnown RBP13.83□□□□□ -0.2
RPRD1A-202ENST00000399022 WBP2Q969T9 261 aa13.83□□□□□ -0.2
RPRD1A-202ENST00000399022 NARFLQ9H6Q4 476 aa13.83□□□□□ -0.2
RPRD1A-202ENST00000399022 PRDM9Q9NQV7 894 aa13.83□□□□□ -0.2
RPRD1A-202ENST00000399022 FBXL3Q9UKT7 428 aa13.83□□□□□ -0.2
RPRD1A-202ENST00000399022 NDRG2Q9UN36 371 aaKnown RBP13.83□□□□□ -0.2
RPRD1A-202ENST00000399022 ZNF705EA8MWA4 302 aaPredicted RBP13.83□□□□□ -0.2
RPRD1A-202ENST00000399022 H3BUI4 141 aa13.83□□□□□ -0.2
RPRD1A-202ENST00000399022 GATBO75879 557 aaKnown RBP13.83□□□□□ -0.2
RPRD1A-202ENST00000399022 CMPK1P30085 196 aa13.83□□□□□ -0.2
RPRD1A-202ENST00000399022 ACTR1BP42025 376 aa13.83□□□□□ -0.2
RPRD1A-202ENST00000399022 ACTR1AP61163 376 aa13.83□□□□□ -0.2
RPRD1A-202ENST00000399022 ASAH1Q13510 395 aa13.83□□□□□ -0.2
RPRD1A-202ENST00000399022 SCGB2B2Q4G0G5 96 aa13.83□□□□□ -0.2
RPRD1A-202ENST00000399022 SLC39A5Q6ZMH5 540 aa13.83□□□□□ -0.2
RPRD1A-202ENST00000399022 STX12Q86Y82 276 aa13.83□□□□□ -0.2
RPRD1A-202ENST00000399022 FCAMRQ8WWV6 532 aa13.83□□□□□ -0.2
RPRD1A-202ENST00000399022 FKBP10Q96AY3 582 aa13.83□□□□□ -0.2
RPRD1A-202ENST00000399022 UQCC2Q9BRT2 126 aa13.83□□□□□ -0.2
RPRD1A-202ENST00000399022 ASB4Q9Y574 426 aa13.83□□□□□ -0.2
RPRD1A-202ENST00000399022 SCAMP2O15127 329 aaKnown RBP13.82□□□□□ -0.2
RPRD1A-202ENST00000399022 TPPPO94811 219 aa13.82□□□□□ -0.2
RPRD1A-202ENST00000399022 C1GALT1C1LP0DN25 315 aa13.82□□□□□ -0.2
RPRD1A-202ENST00000399022 HLA-FP30511 346 aa13.82□□□□□ -0.2
RPRD1A-202ENST00000399022 KHKP50053 298 aa13.82□□□□□ -0.2
RPRD1A-202ENST00000399022 SKP1P63208 163 aa13.82□□□□□ -0.2
RPRD1A-202ENST00000399022 PRR5P85299 388 aa13.82□□□□□ -0.2
RPRD1A-202ENST00000399022 GALK2Q01415 458 aa13.82□□□□□ -0.2
RPRD1A-202ENST00000399022 LASP1Q14847 261 aaKnown RBP13.82□□□□□ -0.2
RPRD1A-202ENST00000399022 ZNHIT3Q15649 155 aaPredicted RBP13.82□□□□□ -0.2
RPRD1A-202ENST00000399022 HSD11B1LQ7Z5J1 315 aa13.82□□□□□ -0.2
RPRD1A-202ENST00000399022 TRAM1L1Q8N609 369 aa13.82□□□□□ -0.2
RPRD1A-202ENST00000399022 KCT2Q8NC54 265 aa13.82□□□□□ -0.2
RPRD1A-202ENST00000399022 THAP6Q8TBB0 222 aa13.82□□□□□ -0.2
RPRD1A-202ENST00000399022 ST8SIA2Q92186 375 aa13.82□□□□□ -0.2
RPRD1A-202ENST00000399022 SMPDL3AQ92484 453 aa13.82□□□□□ -0.2
RPRD1A-202ENST00000399022 NKD1Q969G9 470 aa13.82□□□□□ -0.2
RPRD1A-202ENST00000399022 TMEM27Q9HBJ8 222 aa13.82□□□□□ -0.2
RPRD1A-202ENST00000399022 RPP14O95059 124 aaKnown RBP13.82□□□□□ -0.2
RPRD1A-202ENST00000399022 SLC22A10Q63ZE4 541 aa13.82□□□□□ -0.2
RPRD1A-202ENST00000399022 OR52N2Q8NGI0 321 aa13.82□□□□□ -0.2
RPRD1A-202ENST00000399022 CHFRQ96EP1 664 aa13.82□□□□□ -0.2
RPRD1A-202ENST00000399022 GSX2Q9BZM3 304 aa13.82□□□□□ -0.2
RPRD1A-202ENST00000399022 THSD1Q9NS62 852 aa13.82□□□□□ -0.2
RPRD1A-202ENST00000399022 PLEKHA6Q9Y2H5 1048 aa13.82□□□□□ -0.2
RPRD1A-202ENST00000399022 LRRC72A6NJI9 287 aa13.82□□□□□ -0.2
RPRD1A-202ENST00000399022 GMDSO60547 372 aa13.82□□□□□ -0.2
RPRD1A-202ENST00000399022 MPC1LP0DKB6 136 aa13.82□□□□□ -0.2
RPRD1A-202ENST00000399022 VAMP1P23763 118 aa13.82□□□□□ -0.2
RPRD1A-202ENST00000399022 GDI1P31150 447 aa13.82□□□□□ -0.2
RPRD1A-202ENST00000399022 OR12D2P58182 307 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms