RNA–Protein interactions for RNA: ENST00000377270.7

FXN-201, Transcript of frataxin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FXN, Length 2,608 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXN-201ENST00000377270 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP14.66□□□□□ -0.06
FXN-201ENST00000377270 RHPN2P1A8MT19 583 aa14.66□□□□□ -0.06
FXN-201ENST00000377270 NEDD8-MDP1E9PL57 170 aa14.66□□□□□ -0.06
FXN-201ENST00000377270 LEFTY2O00292 366 aa14.66□□□□□ -0.06
FXN-201ENST00000377270 RORAP35398 523 aa14.66□□□□□ -0.06
FXN-201ENST00000377270 SNRPD1P62314 119 aaKnown RBP14.66□□□□□ -0.06
FXN-201ENST00000377270 RIPPLY1Q0D2K3 151 aa14.66□□□□□ -0.06
FXN-201ENST00000377270 SNAPC1Q16533 368 aa14.66□□□□□ -0.06
FXN-201ENST00000377270 RNF212Q495C1 297 aa14.66□□□□□ -0.06
FXN-201ENST00000377270 LCN1P1Q5VSP4 162 aa14.66□□□□□ -0.06
FXN-201ENST00000377270 RAET1GQ6H3X3 334 aa14.66□□□□□ -0.06
FXN-201ENST00000377270 OR2T5Q6IEZ7 315 aa14.66□□□□□ -0.06
FXN-201ENST00000377270 FRMPD2BQ6IN97 320 aa14.66□□□□□ -0.06
FXN-201ENST00000377270 HSD17B13Q7Z5P4 300 aaPredicted RBP14.66□□□□□ -0.06
FXN-201ENST00000377270 CBARPQ8N350 705 aaPredicted RBP14.66□□□□□ -0.06
FXN-201ENST00000377270 OR10Q1Q8NGQ4 319 aa14.66□□□□□ -0.06
FXN-201ENST00000377270 OR2T29Q8NH02 315 aa14.66□□□□□ -0.06
FXN-201ENST00000377270 PUM2Q8TB72 1066 aaKnown RBP eCLIP14.66□□□□□ -0.06
FXN-201ENST00000377270 RAD9AQ99638 391 aa14.66□□□□□ -0.06
FXN-201ENST00000377270 MED28Q9H204 178 aa14.66□□□□□ -0.06
FXN-201ENST00000377270 SUV39H2Q9H5I1 410 aa14.66□□□□□ -0.06
FXN-201ENST00000377270 PLCXD1Q9NUJ7 323 aa14.66□□□□□ -0.06
FXN-201ENST00000377270 PDP1Q9P0J1 537 aaPredicted RBP14.66□□□□□ -0.06
FXN-201ENST00000377270 SAMHD1Q9Y3Z3 626 aaKnown RBP14.66□□□□□ -0.06
FXN-201ENST00000377270 PDE4DIPQ5VU43 2346 aa14.66□□□□□ -0.06
FXN-201ENST00000377270 DENND4AQ7Z401 1863 aa14.65□□□□□ -0.06
FXN-201ENST00000377270 CLCA1A8K7I4 914 aa14.65□□□□□ -0.06
FXN-201ENST00000377270 H3BM21 787 aa14.65□□□□□ -0.06
FXN-201ENST00000377270 CACNB4O00305 520 aaPredicted RBP14.65□□□□□ -0.06
FXN-201ENST00000377270 STSP08842 583 aa14.65□□□□□ -0.06
FXN-201ENST00000377270 LHCGRP22888 699 aa14.65□□□□□ -0.06
FXN-201ENST00000377270 GNALP38405 381 aa14.65□□□□□ -0.06
FXN-201ENST00000377270 NUDT6P53370 316 aa14.65□□□□□ -0.06
FXN-201ENST00000377270 NPRL3Q12980 569 aa14.65□□□□□ -0.06
FXN-201ENST00000377270 TIMM50Q3ZCQ8 353 aa14.65□□□□□ -0.06
FXN-201ENST00000377270 SGO1Q5FBB7 561 aa14.65□□□□□ -0.06
FXN-201ENST00000377270 LRRC66Q68CR7 880 aa14.65□□□□□ -0.06
FXN-201ENST00000377270 RNF130Q86XS8 419 aa14.65□□□□□ -0.06
FXN-201ENST00000377270 DUSP18Q8NEJ0 188 aa14.65□□□□□ -0.06
FXN-201ENST00000377270 GGHQ92820 318 aa14.65□□□□□ -0.06
FXN-201ENST00000377270 SPACA7Q96KW9 195 aa14.65□□□□□ -0.06
FXN-201ENST00000377270 EMC7Q9NPA0 242 aa14.65□□□□□ -0.06
FXN-201ENST00000377270 RBFOX1Q9NWB1 397 aaKnown RBP14.65□□□□□ -0.06
FXN-201ENST00000377270 PTTG3PQ9NZH4 202 aa14.65□□□□□ -0.06
FXN-201ENST00000377270 CARNS1A5YM72 827 aa14.65□□□□□ -0.06
FXN-201ENST00000377270 DNAJA1P31689 397 aaKnown RBP14.65□□□□□ -0.06
FXN-201ENST00000377270 MNX1P50219 401 aaPredicted RBP14.65□□□□□ -0.06
FXN-201ENST00000377270 EXOC3L2Q2M3D2 409 aa14.65□□□□□ -0.06
FXN-201ENST00000377270 GLYR1Q49A26 553 aaPredicted RBP14.65□□□□□ -0.06
FXN-201ENST00000377270 MLIPQ5VWP3 458 aa14.65□□□□□ -0.06
FXN-201ENST00000377270 MBOAT1Q6ZNC8 495 aa14.65□□□□□ -0.06
FXN-201ENST00000377270 RFLNAQ6ZTI6 216 aa14.65□□□□□ -0.06
FXN-201ENST00000377270 TPRG1Q6ZUI0 275 aa14.65□□□□□ -0.06
FXN-201ENST00000377270 DNAJC22Q8N4W6 341 aa14.65□□□□□ -0.06
FXN-201ENST00000377270 ARRDC1Q8N5I2 433 aa14.65□□□□□ -0.06
FXN-201ENST00000377270 COQ8AQ8NI60 647 aa14.65□□□□□ -0.06
FXN-201ENST00000377270 SCRN2Q96FV2 425 aa14.65□□□□□ -0.06
FXN-201ENST00000377270 ZC3HAV1LQ96H79 300 aaKnown RBP14.65□□□□□ -0.06
FXN-201ENST00000377270 MARVELD1Q9BSK0 173 aa14.65□□□□□ -0.06
FXN-201ENST00000377270 DUSP26Q9BV47 211 aa14.65□□□□□ -0.06
FXN-201ENST00000377270 SLC46A2Q9BY10 475 aa14.65□□□□□ -0.06
FXN-201ENST00000377270 OPN3Q9H1Y3 402 aaPredicted RBP14.65□□□□□ -0.06
FXN-201ENST00000377270 SPASTQ9UBP0 616 aa14.65□□□□□ -0.06
FXN-201ENST00000377270 CA14Q9ULX7 337 aa14.65□□□□□ -0.06
FXN-201ENST00000377270 OBSL1O75147 1896 aa14.65□□□□□ -0.06
FXN-201ENST00000377270 C9orf170A2RU37 121 aa14.64□□□□□ -0.07
FXN-201ENST00000377270 INMT-MINDY4F8WBC2 141 aa14.64□□□□□ -0.07
FXN-201ENST00000377270 RGS11O94810 467 aa14.64□□□□□ -0.07
FXN-201ENST00000377270 PTHP01270 115 aa14.64□□□□□ -0.07
FXN-201ENST00000377270 CRYBA1P05813 215 aa14.64□□□□□ -0.07
FXN-201ENST00000377270 FPR1P21462 350 aa14.64□□□□□ -0.07
FXN-201ENST00000377270 SSTR4P31391 388 aa14.64□□□□□ -0.07
FXN-201ENST00000377270 NSG1P42857 185 aa14.64□□□□□ -0.07
FXN-201ENST00000377270 CRISP3P54108 245 aa14.64□□□□□ -0.07
FXN-201ENST00000377270 RPL38P63173 70 aaKnown RBP14.64□□□□□ -0.07
FXN-201ENST00000377270 ARHGEF7Q14155 803 aa14.64□□□□□ -0.07
FXN-201ENST00000377270 TTLL9Q3SXZ7 439 aa14.64□□□□□ -0.07
FXN-201ENST00000377270 ZNF511Q8NB15 262 aa14.64□□□□□ -0.07
FXN-201ENST00000377270 TMIEQ8NEW7 156 aa14.64□□□□□ -0.07
FXN-201ENST00000377270 OR11H7Q8NGC8 314 aa14.64□□□□□ -0.07
FXN-201ENST00000377270 MTERF3Q96E29 417 aa14.64□□□□□ -0.07
FXN-201ENST00000377270 MS4A3Q96HJ5 214 aa14.64□□□□□ -0.07
FXN-201ENST00000377270 SLC38A2Q96QD8 506 aa14.64□□□□□ -0.07
FXN-201ENST00000377270 TCEAL7Q9BRU2 100 aa14.64□□□□□ -0.07
FXN-201ENST00000377270 DDX31Q9H8H2 851 aaKnown RBP14.64□□□□□ -0.07
FXN-201ENST00000377270 AMBNQ9NP70 447 aa14.64□□□□□ -0.07
FXN-201ENST00000377270 CCL27Q9Y4X3 112 aa14.64□□□□□ -0.07
FXN-201ENST00000377270 PIKFYVEQ9Y2I7 2098 aa14.64□□□□□ -0.07
FXN-201ENST00000377270 RGS14O43566 566 aa14.64□□□□□ -0.07
FXN-201ENST00000377270 C8AP07357 584 aa14.64□□□□□ -0.07
FXN-201ENST00000377270 CSF2RAP15509 400 aa14.64□□□□□ -0.07
FXN-201ENST00000377270 WDR5P61964 334 aaKnown RBP14.64□□□□□ -0.07
FXN-201ENST00000377270 HMGCS1Q01581 520 aa14.64□□□□□ -0.07
FXN-201ENST00000377270 TNFRSF17Q02223 184 aa14.64□□□□□ -0.07
FXN-201ENST00000377270 PTSQ03393 145 aa14.64□□□□□ -0.07
FXN-201ENST00000377270 ATP13A5Q4VNC0 1218 aa14.64□□□□□ -0.07
FXN-201ENST00000377270 PYDC2Q56P42 97 aa14.64□□□□□ -0.07
FXN-201ENST00000377270 LRRC73Q5JTD7 316 aa14.64□□□□□ -0.07
FXN-201ENST00000377270 GCNT7Q6ZNI0 430 aa14.64□□□□□ -0.07
FXN-201ENST00000377270 TGIF2LXQ8IUE1 241 aa14.64□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms