RNA–Protein interactions for RNA: ENST00000373243.6

NCDN-202, Transcript of neurochondrin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NCDN, Length 3,683 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCDN-202ENST00000373243 GAREM2Q75VX8 874 aa11.44□□□□□ -0.58
NCDN-202ENST00000373243 CDK20Q8IZL9 346 aa11.44□□□□□ -0.58
NCDN-202ENST00000373243 NEIL3Q8TAT5 605 aa11.44□□□□□ -0.58
NCDN-202ENST00000373243 MED28Q9H204 178 aa11.44□□□□□ -0.58
NCDN-202ENST00000373243 TTYH1Q9H313 450 aaPredicted RBP11.44□□□□□ -0.58
NCDN-202ENST00000373243 OR51I1Q9H343 314 aa11.44□□□□□ -0.58
NCDN-202ENST00000373243 ADAP2Q9NPF8 381 aa11.44□□□□□ -0.58
NCDN-202ENST00000373243 TDP1Q9NUW8 608 aa11.44□□□□□ -0.58
NCDN-202ENST00000373243 ACTR10Q9NZ32 417 aa11.44□□□□□ -0.58
NCDN-202ENST00000373243 P2RX2Q9UBL9 471 aa11.44□□□□□ -0.58
NCDN-202ENST00000373243 ZFR2Q9UPR6 939 aaKnown RBP11.44□□□□□ -0.58
NCDN-202ENST00000373243 TRBV23-1A0A0A0MS06 115 aa11.44□□□□□ -0.58
NCDN-202ENST00000373243 OSMP13725 252 aa11.44□□□□□ -0.58
NCDN-202ENST00000373243 APEX1P27695 318 aaKnown RBP11.44□□□□□ -0.58
NCDN-202ENST00000373243 UGT2B10P36537 528 aa11.44□□□□□ -0.58
NCDN-202ENST00000373243 GPR4P46093 362 aa11.44□□□□□ -0.58
NCDN-202ENST00000373243 MAN2A2P49641 1150 aa11.44□□□□□ -0.58
NCDN-202ENST00000373243 KLHL22Q53GT1 634 aa11.44□□□□□ -0.58
NCDN-202ENST00000373243 ZNF311Q5JNZ3 666 aa11.44□□□□□ -0.58
NCDN-202ENST00000373243 GDPD1Q8N9F7 314 aa11.44□□□□□ -0.58
NCDN-202ENST00000373243 TMEM145Q8NBT3 493 aa11.44□□□□□ -0.58
NCDN-202ENST00000373243 OR52H1Q8NGJ2 320 aa11.44□□□□□ -0.58
NCDN-202ENST00000373243 IRF7Q92985 503 aa11.44□□□□□ -0.58
NCDN-202ENST00000373243 SLC46A2Q9BY10 475 aa11.44□□□□□ -0.58
NCDN-202ENST00000373243 CHIAQ9BZP6 476 aa11.44□□□□□ -0.58
NCDN-202ENST00000373243 BHLHE41Q9C0J9 482 aaPredicted RBP11.44□□□□□ -0.58
NCDN-202ENST00000373243 ABCG4Q9H172 646 aa11.44□□□□□ -0.58
NCDN-202ENST00000373243 ZNF226Q9NYT6 803 aa11.44□□□□□ -0.58
NCDN-202ENST00000373243 FAM183AA6NL82 134 aa11.44□□□□□ -0.58
NCDN-202ENST00000373243 PGRMC2O15173 223 aa11.44□□□□□ -0.58
NCDN-202ENST00000373243 ECDO95905 644 aaPredicted RBP11.44□□□□□ -0.58
NCDN-202ENST00000373243 HMGN1P05114 100 aa11.44□□□□□ -0.58
NCDN-202ENST00000373243 S100A6P06703 90 aa11.44□□□□□ -0.58
NCDN-202ENST00000373243 UQCRC2P22695 453 aa11.44□□□□□ -0.58
NCDN-202ENST00000373243 PNLIPRP1P54315 467 aa11.44□□□□□ -0.58
NCDN-202ENST00000373243 EXOSC2Q13868 293 aaKnown RBP11.44□□□□□ -0.58
NCDN-202ENST00000373243 MRPL58Q14197 206 aaKnown RBP11.44□□□□□ -0.58
NCDN-202ENST00000373243 DUSP6Q16828 381 aa11.44□□□□□ -0.58
NCDN-202ENST00000373243 FAM46CQ5VWP2 391 aa11.44□□□□□ -0.58
NCDN-202ENST00000373243 ZSCAN2Q7Z7L9 614 aaPredicted RBP11.44□□□□□ -0.58
NCDN-202ENST00000373243 KCT2Q8NC54 265 aa11.44□□□□□ -0.58
NCDN-202ENST00000373243 OR52L1Q8NGH7 329 aa11.44□□□□□ -0.58
NCDN-202ENST00000373243 OR10G6Q8NH81 332 aa11.44□□□□□ -0.58
NCDN-202ENST00000373243 OVCA2Q8WZ82 227 aa11.44□□□□□ -0.58
NCDN-202ENST00000373243 NXPE3Q969Y0 559 aa11.44□□□□□ -0.58
NCDN-202ENST00000373243 NUS1Q96E22 293 aa11.44□□□□□ -0.58
NCDN-202ENST00000373243 TCEAL4Q96EI5 215 aa11.44□□□□□ -0.58
NCDN-202ENST00000373243 TMEM175Q9BSA9 504 aa11.44□□□□□ -0.58
NCDN-202ENST00000373243 RBCK1Q9BYM8 510 aa11.44□□□□□ -0.58
NCDN-202ENST00000373243 TMEM168Q9H0V1 697 aa11.44□□□□□ -0.58
NCDN-202ENST00000373243 PAK6Q9NQU5 681 aaPredicted RBP11.44□□□□□ -0.58
NCDN-202ENST00000373243 CUEDC1Q9NWM3 386 aaPredicted RBP11.44□□□□□ -0.58
NCDN-202ENST00000373243 SRRDQ9UH36 339 aa11.44□□□□□ -0.58
NCDN-202ENST00000373243 KLF15Q9UIH9 416 aa11.44□□□□□ -0.58
NCDN-202ENST00000373243 CDV3Q9UKY7 258 aaKnown RBP11.44□□□□□ -0.58
NCDN-202ENST00000373243 STUB1Q9UNE7 303 aa11.44□□□□□ -0.58
NCDN-202ENST00000373243 ORC5O43913 435 aa11.43□□□□□ -0.58
NCDN-202ENST00000373243 PRKRAO75569 313 aaKnown RBP11.43□□□□□ -0.58
NCDN-202ENST00000373243 TRAPPC2P0DI81 140 aa11.43□□□□□ -0.58
NCDN-202ENST00000373243 TRAPPC2BP0DI82 140 aa11.43□□□□□ -0.58
NCDN-202ENST00000373243 TGM3Q08188 693 aa11.43□□□□□ -0.58
NCDN-202ENST00000373243 NXPE4Q6UWF7 544 aa11.43□□□□□ -0.58
NCDN-202ENST00000373243 NUDT13Q86X67 352 aa11.43□□□□□ -0.58
NCDN-202ENST00000373243 KLBQ86Z14 1044 aa11.43□□□□□ -0.58
NCDN-202ENST00000373243 NLGN4YQ8NFZ3 816 aaPredicted RBP11.43□□□□□ -0.58
NCDN-202ENST00000373243 SETD6Q8TBK2 473 aa11.43□□□□□ -0.58
NCDN-202ENST00000373243 OR8D1Q8WZ84 308 aa11.43□□□□□ -0.58
NCDN-202ENST00000373243 SMPDL3AQ92484 453 aa11.43□□□□□ -0.58
NCDN-202ENST00000373243 OPALINQ96PE5 141 aa11.43□□□□□ -0.58
NCDN-202ENST00000373243 CXorf36Q9H7Y0 433 aa11.43□□□□□ -0.58
NCDN-202ENST00000373243 DMRT3Q9NQL9 472 aa11.43□□□□□ -0.58
NCDN-202ENST00000373243 SLC39A1Q9NY26 324 aa11.43□□□□□ -0.58
NCDN-202ENST00000373243 SNX11Q9Y5W9 270 aa11.43□□□□□ -0.58
NCDN-202ENST00000373243 LOC102723532A0A0G2JNH3 316 aa11.43□□□□□ -0.58
NCDN-202ENST00000373243 LINC00862A6NCI5 91 aa11.43□□□□□ -0.58
NCDN-202ENST00000373243 WASH3PC4AMC7 463 aa11.43□□□□□ -0.58
NCDN-202ENST00000373243 GAPDHSO14556 408 aaPredicted RBP11.43□□□□□ -0.58
NCDN-202ENST00000373243 LRRTM2O43300 516 aa11.43□□□□□ -0.58
NCDN-202ENST00000373243 RPN2P04844 631 aa11.43□□□□□ -0.58
NCDN-202ENST00000373243 ZNF30P17039 623 aa11.43□□□□□ -0.58
NCDN-202ENST00000373243 ZNF8P17098 575 aaPredicted RBP11.43□□□□□ -0.58
NCDN-202ENST00000373243 CD6P30203 668 aa11.43□□□□□ -0.58
NCDN-202ENST00000373243 MAP2K3P46734 347 aa11.43□□□□□ -0.58
NCDN-202ENST00000373243 DCDC1P59894 354 aa11.43□□□□□ -0.58
NCDN-202ENST00000373243 SGCGQ13326 291 aa11.43□□□□□ -0.58
NCDN-202ENST00000373243 ZNF782Q6ZMW2 699 aaPredicted RBP11.43□□□□□ -0.58
NCDN-202ENST00000373243 FAM124AQ86V42 546 aa11.43□□□□□ -0.58
NCDN-202ENST00000373243 SLC30A8Q8IWU4 369 aa11.43□□□□□ -0.58
NCDN-202ENST00000373243 SYNPOQ8N3V7 929 aa11.43□□□□□ -0.58
NCDN-202ENST00000373243 PIGXQ8TBF5 258 aa11.43□□□□□ -0.58
NCDN-202ENST00000373243 SLC38A5Q8WUX1 472 aa11.43□□□□□ -0.58
NCDN-202ENST00000373243 SAMD11Q96NU1 681 aa11.43□□□□□ -0.58
NCDN-202ENST00000373243 PCOLCE2Q9UKZ9 415 aa11.43□□□□□ -0.58
NCDN-202ENST00000373243 ACSL5Q9ULC5 683 aa11.43□□□□□ -0.58
NCDN-202ENST00000373243 RPH3AQ9Y2J0 694 aaPredicted RBP11.43□□□□□ -0.58
NCDN-202ENST00000373243 IRAK3Q9Y616 596 aa11.43□□□□□ -0.58
NCDN-202ENST00000373243 LCTP09848 1927 aa11.43□□□□□ -0.58
NCDN-202ENST00000373243 RNASET2O00584 256 aaKnown RBP11.42□□□□□ -0.58
NCDN-202ENST00000373243 SLC16A5O15375 505 aa11.42□□□□□ -0.58
NCDN-202ENST00000373243 VNN2O95498 520 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms