RNA–Protein interactions for RNA: ENST00000361909.8

CMTM3-201, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CMTM3, Length 2,159 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-201ENST00000361909 HDHD2Q9H0R4 259 aa17.96■□□□□ 0.46
CMTM3-201ENST00000361909 CLEC1BQ9P126 229 aa17.96■□□□□ 0.46
CMTM3-201ENST00000361909 CBLCQ9ULV8 474 aa17.96■□□□□ 0.46
CMTM3-201ENST00000361909 PLXNB3Q9ULL4 1909 aa17.95■□□□□ 0.46
CMTM3-201ENST00000361909 C6orf47O95873 294 aa17.95■□□□□ 0.46
CMTM3-201ENST00000361909 ZP3P21754 424 aa17.95■□□□□ 0.46
CMTM3-201ENST00000361909 RECQLP46063 649 aaPredicted RBP17.95■□□□□ 0.46
CMTM3-201ENST00000361909 LIM2P55344 173 aa17.95■□□□□ 0.46
CMTM3-201ENST00000361909 EXOSC2Q13868 293 aaKnown RBP17.95■□□□□ 0.46
CMTM3-201ENST00000361909 TANGO2Q6ICL3 276 aa17.95■□□□□ 0.46
CMTM3-201ENST00000361909 C16orf62Q7Z3J2 963 aa17.95■□□□□ 0.46
CMTM3-201ENST00000361909 LRRC28Q86X40 367 aaPredicted RBP17.95■□□□□ 0.46
CMTM3-201ENST00000361909 TIGD4Q8IY51 512 aa17.95■□□□□ 0.46
CMTM3-201ENST00000361909 ZNF655Q8N720 491 aaPredicted RBP17.95■□□□□ 0.46
CMTM3-201ENST00000361909 ARIH2OSQ8N7S6 290 aa17.95■□□□□ 0.46
CMTM3-201ENST00000361909 TM9SF2Q99805 663 aa17.95■□□□□ 0.46
CMTM3-201ENST00000361909 ASB6Q9NWX5 421 aa17.95■□□□□ 0.46
CMTM3-201ENST00000361909 EMC3Q9P0I2 261 aa17.95■□□□□ 0.46
CMTM3-201ENST00000361909 KIF25Q9UIL4 384 aa17.95■□□□□ 0.46
CMTM3-201ENST00000361909 MAB21L2Q9Y586 359 aa17.95■□□□□ 0.46
CMTM3-201ENST00000361909 PSIP1O75475 530 aaKnown RBP17.94■□□□□ 0.46
CMTM3-201ENST00000361909 DDCP20711 480 aa17.94■□□□□ 0.46
CMTM3-201ENST00000361909 RBMS1P29558 406 aaKnown RBP17.94■□□□□ 0.46
CMTM3-201ENST00000361909 GAS1P54826 345 aa17.94■□□□□ 0.46
CMTM3-201ENST00000361909 DDX39BQ13838 428 aaKnown RBP17.94■□□□□ 0.46
CMTM3-201ENST00000361909 DOC2AQ14183 400 aa17.94■□□□□ 0.46
CMTM3-201ENST00000361909 GAB4Q2WGN9 574 aa17.94■□□□□ 0.46
CMTM3-201ENST00000361909 MINDY4Q4G0A6 757 aa17.94■□□□□ 0.46
CMTM3-201ENST00000361909 ZNF385BQ569K4 471 aa17.94■□□□□ 0.46
CMTM3-201ENST00000361909 VITQ6UXI7 678 aa17.94■□□□□ 0.46
CMTM3-201ENST00000361909 ASPGQ86U10 573 aa17.94■□□□□ 0.46
CMTM3-201ENST00000361909 RASGRP3Q8IV61 690 aa17.94■□□□□ 0.46
CMTM3-201ENST00000361909 OR2A12Q8NGT7 310 aa17.94■□□□□ 0.46
CMTM3-201ENST00000361909 FGF11Q92914 225 aa17.94■□□□□ 0.46
CMTM3-201ENST00000361909 RBPMSQ93062 196 aaKnown RBP17.94■□□□□ 0.46
CMTM3-201ENST00000361909 KCTD12Q96CX2 325 aaKnown RBP17.94■□□□□ 0.46
CMTM3-201ENST00000361909 DPAGT1Q9H3H5 408 aa17.94■□□□□ 0.46
CMTM3-201ENST00000361909 SGK2Q9HBY8 427 aa17.94■□□□□ 0.46
CMTM3-201ENST00000361909 TVP23BQ9NYZ1 205 aa17.94■□□□□ 0.46
CMTM3-201ENST00000361909 RHCGQ9UBD6 479 aa17.94■□□□□ 0.46
CMTM3-201ENST00000361909 GLS2Q9UI32 602 aa17.94■□□□□ 0.46
CMTM3-201ENST00000361909 ACAD8Q9UKU7 415 aa17.94■□□□□ 0.46
CMTM3-201ENST00000361909 RABL2BQ9UNT1 228 aa17.94■□□□□ 0.46
CMTM3-201ENST00000361909 YARS2Q9Y2Z4 477 aaKnown RBP17.94■□□□□ 0.46
CMTM3-201ENST00000361909 UPK3BL1B0FP48 263 aa17.94■□□□□ 0.46
CMTM3-201ENST00000361909 UPK3BL2E5RIL1 263 aa17.94■□□□□ 0.46
CMTM3-201ENST00000361909 CASC3O15234 703 aaKnown RBP17.94■□□□□ 0.46
CMTM3-201ENST00000361909 TLX2O43763 284 aaPredicted RBP17.94■□□□□ 0.46
CMTM3-201ENST00000361909 HOXD4P09016 255 aaPredicted RBP17.94■□□□□ 0.46
CMTM3-201ENST00000361909 GKP32189 559 aa17.94■□□□□ 0.46
CMTM3-201ENST00000361909 AVPR1BP47901 424 aa17.94■□□□□ 0.46
CMTM3-201ENST00000361909 PUM1Q14671 1186 aaKnown RBP eCLIP17.94■□□□□ 0.46
CMTM3-201ENST00000361909 TMEM44Q2T9K0 475 aa17.94■□□□□ 0.46
CMTM3-201ENST00000361909 BCL2L15Q5TBC7 163 aa17.94■□□□□ 0.46
CMTM3-201ENST00000361909 SLC36A4Q6YBV0 504 aa17.94■□□□□ 0.46
CMTM3-201ENST00000361909 THOC6Q86W42 341 aaKnown RBP17.94■□□□□ 0.46
CMTM3-201ENST00000361909 C12orf40Q86WS4 652 aa17.94■□□□□ 0.46
CMTM3-201ENST00000361909 DOCK8Q8NF50 2099 aa17.94■□□□□ 0.46
CMTM3-201ENST00000361909 OR11H7Q8NGC8 314 aa17.94■□□□□ 0.46
CMTM3-201ENST00000361909 NEIL3Q8TAT5 605 aa17.94■□□□□ 0.46
CMTM3-201ENST00000361909 SKA2Q8WVK7 121 aaPredicted RBP17.94■□□□□ 0.46
CMTM3-201ENST00000361909 PPCDCQ96CD2 204 aa17.94■□□□□ 0.46
CMTM3-201ENST00000361909 TOE1Q96GM8 510 aaKnown RBP17.94■□□□□ 0.46
CMTM3-201ENST00000361909 LRR1Q96L50 414 aa17.94■□□□□ 0.46
CMTM3-201ENST00000361909 PKP4Q99569 1192 aa17.94■□□□□ 0.46
CMTM3-201ENST00000361909 FUZQ9BT04 418 aa17.94■□□□□ 0.46
CMTM3-201ENST00000361909 ZC4H2Q9NQZ6 224 aa17.94■□□□□ 0.46
CMTM3-201ENST00000361909 DEC1Q9P2X7 70 aa17.94■□□□□ 0.46
CMTM3-201ENST00000361909 ZNF222Q9UK12 451 aa17.94■□□□□ 0.46
CMTM3-201ENST00000361909 CDH23Q9H251 3354 aa17.94■□□□□ 0.46
CMTM3-201ENST00000361909 KHNYNO15037 678 aaKnown RBP17.93■□□□□ 0.46
CMTM3-201ENST00000361909 AKAP8O43823 692 aaKnown RBP17.93■□□□□ 0.46
CMTM3-201ENST00000361909 TP53P04637 393 aaPredicted RBP17.93■□□□□ 0.46
CMTM3-201ENST00000361909 POLR2LP62875 67 aaKnown RBP17.93■□□□□ 0.46
CMTM3-201ENST00000361909 EFNB1P98172 346 aa17.93■□□□□ 0.46
CMTM3-201ENST00000361909 POU4F3Q15319 338 aa17.93■□□□□ 0.46
CMTM3-201ENST00000361909 SLC5A12Q1EHB4 618 aa17.93■□□□□ 0.46
CMTM3-201ENST00000361909 CYP27C1Q4G0S4 372 aa17.93■□□□□ 0.46
CMTM3-201ENST00000361909 RTL4Q6ZR62 310 aa17.93■□□□□ 0.46
CMTM3-201ENST00000361909 Q6ZVU0 165 aa17.93■□□□□ 0.46
CMTM3-201ENST00000361909 BMP8AQ7Z5Y6 402 aa17.93■□□□□ 0.46
CMTM3-201ENST00000361909 ELSPBP1Q96BH3 223 aa17.93■□□□□ 0.46
CMTM3-201ENST00000361909 NXPE2Q96DL1 559 aa17.93■□□□□ 0.46
CMTM3-201ENST00000361909 SCRN2Q96FV2 425 aa17.93■□□□□ 0.46
CMTM3-201ENST00000361909 PDXPQ96GD0 296 aa17.93■□□□□ 0.46
CMTM3-201ENST00000361909 LRIG1Q96JA1 1093 aa17.93■□□□□ 0.46
CMTM3-201ENST00000361909 A4GALTQ9NPC4 353 aa17.93■□□□□ 0.46
CMTM3-201ENST00000361909 SLCO1C1Q9NYB5 712 aa17.93■□□□□ 0.46
CMTM3-201ENST00000361909 EXTL2Q9UBQ6 330 aa17.93■□□□□ 0.46
CMTM3-201ENST00000361909 EXO1Q9UQ84 846 aaKnown RBP17.93■□□□□ 0.46
CMTM3-201ENST00000361909 CACNG2Q9Y698 323 aa17.93■□□□□ 0.46
CMTM3-201ENST00000361909 FAM227AF5H4B4 570 aa17.93■□□□□ 0.46
CMTM3-201ENST00000361909 CLDN7O95471 211 aa17.93■□□□□ 0.46
CMTM3-201ENST00000361909 SMSP52788 366 aa17.93■□□□□ 0.46
CMTM3-201ENST00000361909 TAP2Q03519 686 aa17.93■□□□□ 0.46
CMTM3-201ENST00000361909 RPA4Q13156 261 aa17.93■□□□□ 0.46
CMTM3-201ENST00000361909 ARSKQ6UWY0 536 aa17.93■□□□□ 0.46
CMTM3-201ENST00000361909 FGD2Q7Z6J4 655 aa17.93■□□□□ 0.46
CMTM3-201ENST00000361909 LRRC56Q8IYG6 542 aaPredicted RBP17.93■□□□□ 0.46
CMTM3-201ENST00000361909 OR5M3Q8NGP4 307 aa17.93■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms