RNA–Protein interactions for RNA: ENST00000356800.6

SMARCD3-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 1 (best) BASIC

Gene SMARCD3, Length 1,669 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-202ENST00000356800 ANKRD37Q7Z713 158 aa16.88■□□□□ 0.29
SMARCD3-202ENST00000356800 EME1Q96AY2 570 aa16.88■□□□□ 0.29
SMARCD3-202ENST00000356800 FBXL20Q96IG2 436 aa16.88■□□□□ 0.29
SMARCD3-202ENST00000356800 TREX2Q9BQ50 279 aaPredicted RBP16.88■□□□□ 0.29
SMARCD3-202ENST00000356800 BDH2Q9BUT1 245 aa16.88■□□□□ 0.29
SMARCD3-202ENST00000356800 RSPO3Q9BXY4 272 aaPredicted RBP16.88■□□□□ 0.29
SMARCD3-202ENST00000356800 OR10A5Q9H207 317 aa16.88■□□□□ 0.29
SMARCD3-202ENST00000356800 PIGUQ9H490 435 aa16.88■□□□□ 0.29
SMARCD3-202ENST00000356800 WDR54Q9H977 334 aa16.88■□□□□ 0.29
SMARCD3-202ENST00000356800 FOLH1BQ9HBA9 442 aa16.88■□□□□ 0.29
SMARCD3-202ENST00000356800 GIN1Q9NXP7 522 aa16.88■□□□□ 0.29
SMARCD3-202ENST00000356800 FOXJ2Q9P0K8 574 aa16.88■□□□□ 0.29
SMARCD3-202ENST00000356800 C3orf18Q9UK00 162 aa16.88■□□□□ 0.29
SMARCD3-202ENST00000356800 DTNAQ9Y4J8 743 aa16.88■□□□□ 0.29
SMARCD3-202ENST00000356800 FAM149AA5PLN7 773 aa16.87■□□□□ 0.29
SMARCD3-202ENST00000356800 DUXAA6NLW8 204 aa16.87■□□□□ 0.29
SMARCD3-202ENST00000356800 CLOCKO15516 846 aa16.87■□□□□ 0.29
SMARCD3-202ENST00000356800 ALOX12BO75342 701 aa16.87■□□□□ 0.29
SMARCD3-202ENST00000356800 ZIC2O95409 532 aaPredicted RBP16.87■□□□□ 0.29
SMARCD3-202ENST00000356800 MT-ND1P03886 318 aa16.87■□□□□ 0.29
SMARCD3-202ENST00000356800 OPN1SWP03999 348 aa16.87■□□□□ 0.29
SMARCD3-202ENST00000356800 IGKV3-11P04433 115 aa16.87■□□□□ 0.29
SMARCD3-202ENST00000356800 SLC5A2P31639 672 aa16.87■□□□□ 0.29
SMARCD3-202ENST00000356800 EMP2P54851 167 aa16.87■□□□□ 0.29
SMARCD3-202ENST00000356800 ZNF155Q12901 538 aaPredicted RBP16.87■□□□□ 0.29
SMARCD3-202ENST00000356800 GNA13Q14344 377 aa16.87■□□□□ 0.29
SMARCD3-202ENST00000356800 WLSQ5T9L3 541 aa16.87■□□□□ 0.29
SMARCD3-202ENST00000356800 VTCN1Q7Z7D3 282 aa16.87■□□□□ 0.29
SMARCD3-202ENST00000356800 AMER2Q8N7J2 671 aa16.87■□□□□ 0.29
SMARCD3-202ENST00000356800 C7orf57Q8NEG2 295 aa16.87■□□□□ 0.29
SMARCD3-202ENST00000356800 C16orf52Q8NHV5 167 aa16.87■□□□□ 0.29
SMARCD3-202ENST00000356800 SLC2A12Q8TD20 617 aa16.87■□□□□ 0.29
SMARCD3-202ENST00000356800 ZNF721Q8TF20 911 aa16.87■□□□□ 0.29
SMARCD3-202ENST00000356800 HSH2DQ96JZ2 352 aa16.87■□□□□ 0.29
SMARCD3-202ENST00000356800 VSTM2LQ96N03 204 aa16.87■□□□□ 0.29
SMARCD3-202ENST00000356800 DOHHQ9BU89 302 aa16.87■□□□□ 0.29
SMARCD3-202ENST00000356800 IL1RAPQ9NPH3 570 aa16.87■□□□□ 0.29
SMARCD3-202ENST00000356800 CLCA3PQ9Y6N3 262 aa16.87■□□□□ 0.29
SMARCD3-202ENST00000356800 CEP250Q9BV73 2442 aa16.86■□□□□ 0.29
SMARCD3-202ENST00000356800 IGHV3-20A0A0C4DH32 117 aa16.86■□□□□ 0.29
SMARCD3-202ENST00000356800 A8MVJ9 347 aa16.86■□□□□ 0.29
SMARCD3-202ENST00000356800 PRAMEF2O60811 474 aa16.86■□□□□ 0.29
SMARCD3-202ENST00000356800 ALOX5P09917 674 aa16.86■□□□□ 0.29
SMARCD3-202ENST00000356800 CEACAM1P13688 526 aa16.86■□□□□ 0.29
SMARCD3-202ENST00000356800 SLC37A1P57057 533 aa16.86■□□□□ 0.29
SMARCD3-202ENST00000356800 PSG6Q00889 435 aa16.86■□□□□ 0.29
SMARCD3-202ENST00000356800 NCF4Q15080 339 aa16.86■□□□□ 0.29
SMARCD3-202ENST00000356800 PRAMEF8Q5VWM4 474 aa16.86■□□□□ 0.29
SMARCD3-202ENST00000356800 PRAMEF7Q5VXH5 474 aa16.86■□□□□ 0.29
SMARCD3-202ENST00000356800 CACTIN-AS1Q8N1I8 211 aa16.86■□□□□ 0.29
SMARCD3-202ENST00000356800 OR7G1Q8NGA0 311 aa16.86■□□□□ 0.29
SMARCD3-202ENST00000356800 PIK3R3Q92569 461 aa16.86■□□□□ 0.29
SMARCD3-202ENST00000356800 STACQ99469 402 aa16.86■□□□□ 0.29
SMARCD3-202ENST00000356800 LMF2Q9BU23 707 aaKnown RBP16.86■□□□□ 0.29
SMARCD3-202ENST00000356800 CRB3Q9BUF7 120 aa16.86■□□□□ 0.29
SMARCD3-202ENST00000356800 OR8D2Q9GZM6 311 aa16.86■□□□□ 0.29
SMARCD3-202ENST00000356800 VCXQ9H320 206 aa16.86■□□□□ 0.29
SMARCD3-202ENST00000356800 BCL2L10Q9HD36 194 aa16.86■□□□□ 0.29
SMARCD3-202ENST00000356800 DUSP22Q9NRW4 184 aa16.86■□□□□ 0.29
SMARCD3-202ENST00000356800 DNAJB9Q9UBS3 223 aa16.86■□□□□ 0.29
SMARCD3-202ENST00000356800 GPN3Q9UHW5 284 aaPredicted RBP16.86■□□□□ 0.29
SMARCD3-202ENST00000356800 LIPT1Q9Y234 373 aa16.86■□□□□ 0.29
SMARCD3-202ENST00000356800 H0YJX3 145 aa16.85■□□□□ 0.29
SMARCD3-202ENST00000356800 KLF7O75840 302 aaPredicted RBP16.85■□□□□ 0.29
SMARCD3-202ENST00000356800 PDE9AO76083 593 aa16.85■□□□□ 0.29
SMARCD3-202ENST00000356800 NKX2-2O95096 273 aa16.85■□□□□ 0.29
SMARCD3-202ENST00000356800 H6PDO95479 791 aa16.85■□□□□ 0.29
SMARCD3-202ENST00000356800 AGR2O95994 175 aa16.85■□□□□ 0.29
SMARCD3-202ENST00000356800 ZNF26P17031 533 aaPredicted RBP16.85■□□□□ 0.29
SMARCD3-202ENST00000356800 NOVA1P51513 510 aaKnown RBP16.85■□□□□ 0.29
SMARCD3-202ENST00000356800 CRISP3P54108 245 aa16.85■□□□□ 0.29
SMARCD3-202ENST00000356800 GPAT3Q53EU6 434 aa16.85■□□□□ 0.29
SMARCD3-202ENST00000356800 SFT2D3Q587I9 215 aa16.85■□□□□ 0.29
SMARCD3-202ENST00000356800 CMPK2Q5EBM0 449 aa16.85■□□□□ 0.29
SMARCD3-202ENST00000356800 ATAD3BQ5T9A4 648 aa16.85■□□□□ 0.29
SMARCD3-202ENST00000356800 TMEM205Q6UW68 189 aa16.85■□□□□ 0.29
SMARCD3-202ENST00000356800 C6orf15Q6UXA7 325 aaPredicted RBP16.85■□□□□ 0.29
SMARCD3-202ENST00000356800 C16orf62Q7Z3J2 963 aa16.85■□□□□ 0.29
SMARCD3-202ENST00000356800 OR14A16Q8NHC5 309 aa16.85■□□□□ 0.29
SMARCD3-202ENST00000356800 LZICQ8WZA0 190 aa16.85■□□□□ 0.29
SMARCD3-202ENST00000356800 TRNT1Q96Q11 434 aaKnown RBP16.85■□□□□ 0.29
SMARCD3-202ENST00000356800 NUDT9Q9BW91 350 aa16.85■□□□□ 0.29
SMARCD3-202ENST00000356800 SLC38A1Q9H2H9 487 aa16.85■□□□□ 0.29
SMARCD3-202ENST00000356800 EXD2Q9NVH0 621 aa16.85■□□□□ 0.29
SMARCD3-202ENST00000356800 NXT1Q9UKK6 140 aaKnown RBP16.85■□□□□ 0.29
SMARCD3-202ENST00000356800 NINQ8N4C6 2090 aa16.85■□□□□ 0.29
SMARCD3-202ENST00000356800 GXYLT2A0PJZ3 443 aa16.85■□□□□ 0.29
SMARCD3-202ENST00000356800 C9J4A7 227 aa16.85■□□□□ 0.29
SMARCD3-202ENST00000356800 UMODP07911 640 aa16.85■□□□□ 0.29
SMARCD3-202ENST00000356800 GABRA3P34903 492 aa16.85■□□□□ 0.29
SMARCD3-202ENST00000356800 KCNJ10P78508 379 aa16.85■□□□□ 0.29
SMARCD3-202ENST00000356800 ARHGAP11BQ3KRB8 267 aa16.85■□□□□ 0.29
SMARCD3-202ENST00000356800 NPSR1Q6W5P4 371 aa16.85■□□□□ 0.29
SMARCD3-202ENST00000356800 PIWIL3Q7Z3Z3 882 aaKnown RBP16.85■□□□□ 0.29
SMARCD3-202ENST00000356800 TMPRSS12Q86WS5 348 aa16.85■□□□□ 0.29
SMARCD3-202ENST00000356800 ZDHHC21Q8IVQ6 265 aa16.85■□□□□ 0.29
SMARCD3-202ENST00000356800 ZSCAN1Q8NBB4 408 aa16.85■□□□□ 0.29
SMARCD3-202ENST00000356800 ICA1LQ8NDH6 482 aa16.85■□□□□ 0.29
SMARCD3-202ENST00000356800 BBS10Q8TAM1 723 aa16.85■□□□□ 0.29
SMARCD3-202ENST00000356800 GPR151Q8TDV0 419 aa16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms