RNA–Protein interactions for RNA: ENST00000343483.6

HOXA9-201, Transcript of homeobox A9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXA9, Length 2,060 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9-201ENST00000343483 HNRNPKP61978 463 aaKnown RBP eCLIP17.41■□□□□ 0.38
HOXA9-201ENST00000343483 SIGLEC14Q08ET2 396 aa17.41■□□□□ 0.38
HOXA9-201ENST00000343483 PIN1Q13526 163 aaPredicted RBP17.41■□□□□ 0.38
HOXA9-201ENST00000343483 FAM214AQ32MH5 1076 aa17.41■□□□□ 0.38
HOXA9-201ENST00000343483 TRMT12Q53H54 448 aaKnown RBP17.41■□□□□ 0.38
HOXA9-201ENST00000343483 PRAMEF8Q5VWM4 474 aa17.41■□□□□ 0.38
HOXA9-201ENST00000343483 PRAMEF7Q5VXH5 474 aa17.41■□□□□ 0.38
HOXA9-201ENST00000343483 CCDC103Q8IW40 242 aa17.41■□□□□ 0.38
HOXA9-201ENST00000343483 UBALD2Q8IYN6 164 aa17.41■□□□□ 0.38
HOXA9-201ENST00000343483 DEPDC4Q8N2C3 294 aa17.41■□□□□ 0.38
HOXA9-201ENST00000343483 PARP8Q8N3A8 854 aa17.41■□□□□ 0.38
HOXA9-201ENST00000343483 SLC35A4Q96G79 324 aa17.41■□□□□ 0.38
HOXA9-201ENST00000343483 PSD2Q9BQI7 771 aa17.41■□□□□ 0.38
HOXA9-201ENST00000343483 LDHAL6BQ9BYZ2 381 aaPredicted RBP17.41■□□□□ 0.38
HOXA9-201ENST00000343483 SLC38A1Q9H2H9 487 aa17.41■□□□□ 0.38
HOXA9-201ENST00000343483 DNAAF2Q9NVR5 837 aaKnown RBP17.41■□□□□ 0.38
HOXA9-201ENST00000343483 GIN1Q9NXP7 522 aa17.41■□□□□ 0.38
HOXA9-201ENST00000343483 NTMQ9P121 344 aa17.41■□□□□ 0.38
HOXA9-201ENST00000343483 PTGFRNQ9P2B2 879 aa17.41■□□□□ 0.38
HOXA9-201ENST00000343483 PSORS1C1Q9UIG5 152 aa17.41■□□□□ 0.38
HOXA9-201ENST00000343483 ARRDC5A6NEK1 342 aa17.4■□□□□ 0.38
HOXA9-201ENST00000343483 DUXAA6NLW8 204 aa17.4■□□□□ 0.38
HOXA9-201ENST00000343483 EPPINO95925 133 aa17.4■□□□□ 0.38
HOXA9-201ENST00000343483 LCKP06239 509 aa17.4■□□□□ 0.38
HOXA9-201ENST00000343483 ELAVL4P26378 380 aaKnown RBP17.4■□□□□ 0.38
HOXA9-201ENST00000343483 LSM3P62310 102 aaKnown RBP17.4■□□□□ 0.38
HOXA9-201ENST00000343483 SEC23BQ15437 767 aa17.4■□□□□ 0.38
HOXA9-201ENST00000343483 ZNF311Q5JNZ3 666 aa17.4■□□□□ 0.38
HOXA9-201ENST00000343483 DCST1Q5T197 706 aa17.4■□□□□ 0.38
HOXA9-201ENST00000343483 CDS1Q92903 461 aa17.4■□□□□ 0.38
HOXA9-201ENST00000343483 ZG16BQ96DA0 208 aa17.4■□□□□ 0.38
HOXA9-201ENST00000343483 PLEKHA8Q96JA3 519 aa17.4■□□□□ 0.38
HOXA9-201ENST00000343483 NECTIN3Q9NQS3 549 aa17.4■□□□□ 0.38
HOXA9-201ENST00000343483 PLCXD1Q9NUJ7 323 aa17.4■□□□□ 0.38
HOXA9-201ENST00000343483 CALML5Q9NZT1 146 aa17.4■□□□□ 0.38
HOXA9-201ENST00000343483 TMEM221A6NGB7 291 aa17.4■□□□□ 0.38
HOXA9-201ENST00000343483 M0R296 226 aa17.4■□□□□ 0.38
HOXA9-201ENST00000343483 TPST2O60704 377 aa17.4■□□□□ 0.38
HOXA9-201ENST00000343483 GPR75O95800 540 aa17.4■□□□□ 0.38
HOXA9-201ENST00000343483 LGI1O95970 557 aa17.4■□□□□ 0.38
HOXA9-201ENST00000343483 ALPPP05187 535 aa17.4■□□□□ 0.38
HOXA9-201ENST00000343483 NT5EP21589 574 aa17.4■□□□□ 0.38
HOXA9-201ENST00000343483 ZNF628Q5EBL2 1059 aa17.4■□□□□ 0.38
HOXA9-201ENST00000343483 MLIPQ5VWP3 458 aa17.4■□□□□ 0.38
HOXA9-201ENST00000343483 ZNF770Q6IQ21 691 aaPredicted RBP17.4■□□□□ 0.38
HOXA9-201ENST00000343483 CDC73Q6P1J9 531 aa17.4■□□□□ 0.38
HOXA9-201ENST00000343483 C16orf87Q6PH81 154 aa17.4■□□□□ 0.38
HOXA9-201ENST00000343483 DNAJC22Q8N4W6 341 aa17.4■□□□□ 0.38
HOXA9-201ENST00000343483 SLC15A4Q8N697 577 aa17.4■□□□□ 0.38
HOXA9-201ENST00000343483 OR6T1Q8NGN1 323 aa17.4■□□□□ 0.38
HOXA9-201ENST00000343483 NDNFQ8TB73 568 aa17.4■□□□□ 0.38
HOXA9-201ENST00000343483 MYDGFQ969H8 173 aa17.4■□□□□ 0.38
HOXA9-201ENST00000343483 PINK1Q9BXM7 581 aa17.4■□□□□ 0.38
HOXA9-201ENST00000343483 RBCK1Q9BYM8 510 aa17.4■□□□□ 0.38
HOXA9-201ENST00000343483 AMBNQ9NP70 447 aa17.4■□□□□ 0.38
HOXA9-201ENST00000343483 ADAP2Q9NPF8 381 aa17.4■□□□□ 0.38
HOXA9-201ENST00000343483 UCKL1Q9NWZ5 548 aa17.4■□□□□ 0.38
HOXA9-201ENST00000343483 IMPAD1Q9NX62 359 aa17.4■□□□□ 0.38
HOXA9-201ENST00000343483 GALNT8Q9NY28 637 aa17.4■□□□□ 0.38
HOXA9-201ENST00000343483 ZNF226Q9NYT6 803 aa17.4■□□□□ 0.38
HOXA9-201ENST00000343483 LILRA5A6NI73 299 aa17.39■□□□□ 0.37
HOXA9-201ENST00000343483 LMO7DNF2Z398 122 aa17.39■□□□□ 0.37
HOXA9-201ENST00000343483 M0R3G1 203 aa17.39■□□□□ 0.37
HOXA9-201ENST00000343483 CASC3O15234 703 aaKnown RBP17.39■□□□□ 0.37
HOXA9-201ENST00000343483 OR10H3O60404 316 aa17.39■□□□□ 0.37
HOXA9-201ENST00000343483 FCMRO60667 390 aa17.39■□□□□ 0.37
HOXA9-201ENST00000343483 PFDN1O60925 122 aa17.39■□□□□ 0.37
HOXA9-201ENST00000343483 ATP1B1P05026 303 aa17.39■□□□□ 0.37
HOXA9-201ENST00000343483 ALDH4A1P30038 563 aa17.39■□□□□ 0.37
HOXA9-201ENST00000343483 PDX1P52945 283 aa17.39■□□□□ 0.37
HOXA9-201ENST00000343483 UBE2UQ5VVX9 321 aa17.39■□□□□ 0.37
HOXA9-201ENST00000343483 KLHL17Q6TDP4 642 aa17.39■□□□□ 0.37
HOXA9-201ENST00000343483 VRK2Q86Y07 508 aa17.39■□□□□ 0.37
HOXA9-201ENST00000343483 C1orf216Q8TAB5 229 aa17.39■□□□□ 0.37
HOXA9-201ENST00000343483 GGHQ92820 318 aa17.39■□□□□ 0.37
HOXA9-201ENST00000343483 CLDN23Q96B33 292 aa17.39■□□□□ 0.37
HOXA9-201ENST00000343483 TCTN2Q96GX1 697 aa17.39■□□□□ 0.37
HOXA9-201ENST00000343483 DHRS1Q96LJ7 313 aa17.39■□□□□ 0.37
HOXA9-201ENST00000343483 TGM7Q96PF1 710 aa17.39■□□□□ 0.37
HOXA9-201ENST00000343483 FNDC11Q9BVV2 318 aa17.39■□□□□ 0.37
HOXA9-201ENST00000343483 UCK1Q9HA47 277 aa17.39■□□□□ 0.37
HOXA9-201ENST00000343483 CTPS2Q9NRF8 586 aa17.39■□□□□ 0.37
HOXA9-201ENST00000343483 IRAK4Q9NWZ3 460 aa17.39■□□□□ 0.37
HOXA9-201ENST00000343483 ENOPH1Q9UHY7 261 aa17.39■□□□□ 0.37
HOXA9-201ENST00000343483 SLC13A4Q9UKG4 626 aa17.39■□□□□ 0.37
HOXA9-201ENST00000343483 ACAD8Q9UKU7 415 aa17.39■□□□□ 0.37
HOXA9-201ENST00000343483 A4GNTQ9UNA3 340 aa17.39■□□□□ 0.37
HOXA9-201ENST00000343483 A0A0A6YYC8 382 aaPredicted RBP17.38■□□□□ 0.37
HOXA9-201ENST00000343483 CLCA1A8K7I4 914 aa17.38■□□□□ 0.37
HOXA9-201ENST00000343483 I3L1I5 382 aaPredicted RBP17.38■□□□□ 0.37
HOXA9-201ENST00000343483 J3QRK9 145 aa17.38■□□□□ 0.37
HOXA9-201ENST00000343483 FAAHO00519 579 aa17.38■□□□□ 0.37
HOXA9-201ENST00000343483 SOX18P35713 384 aa17.38■□□□□ 0.37
HOXA9-201ENST00000343483 CXCL12P48061 93 aa17.38■□□□□ 0.37
HOXA9-201ENST00000343483 NUDT6P53370 316 aa17.38■□□□□ 0.37
HOXA9-201ENST00000343483 GFERP55789 205 aa17.38■□□□□ 0.37
HOXA9-201ENST00000343483 RAB38P57729 211 aa17.38■□□□□ 0.37
HOXA9-201ENST00000343483 SMIM11AP58511 58 aa17.38■□□□□ 0.37
HOXA9-201ENST00000343483 VBP1P61758 197 aa17.38■□□□□ 0.37
HOXA9-201ENST00000343483 SLC36A4Q6YBV0 504 aa17.38■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms