RNA–Protein interactions for RNA: ENST00000339701.7

CSMD3-202, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 1 (best)

Gene CSMD3, Length 10,773 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-202ENST00000339701 GARNL3Q5VVW2 1013 aa3.13□□□□□ -1.91
CSMD3-202ENST00000339701 OR2T5Q6IEZ7 315 aa3.13□□□□□ -1.91
CSMD3-202ENST00000339701 ZNF730Q6ZMV8 503 aa3.13□□□□□ -1.91
CSMD3-202ENST00000339701 MON1BQ7L1V2 547 aa3.13□□□□□ -1.91
CSMD3-202ENST00000339701 GHDCQ8N2G8 530 aa3.13□□□□□ -1.91
CSMD3-202ENST00000339701 MINDY1Q8N5J2 469 aa3.13□□□□□ -1.91
CSMD3-202ENST00000339701 OR6Q1Q8NGQ2 317 aa3.13□□□□□ -1.91
CSMD3-202ENST00000339701 OR2T29Q8NH02 315 aa3.13□□□□□ -1.91
CSMD3-202ENST00000339701 BBS10Q8TAM1 723 aa3.13□□□□□ -1.91
CSMD3-202ENST00000339701 ZNF417Q8TAU3 575 aa3.13□□□□□ -1.91
CSMD3-202ENST00000339701 GLYATL1Q969I3 302 aa3.13□□□□□ -1.91
CSMD3-202ENST00000339701 RSPRY1Q96DX4 576 aa3.13□□□□□ -1.91
CSMD3-202ENST00000339701 C1GALT1C1Q96EU7 318 aa3.13□□□□□ -1.91
CSMD3-202ENST00000339701 ACBD6Q9BR61 282 aa3.13□□□□□ -1.91
CSMD3-202ENST00000339701 ABCB8Q9NUT2 735 aa3.13□□□□□ -1.91
CSMD3-202ENST00000339701 CNOT2Q9NZN8 540 aaKnown RBP3.13□□□□□ -1.91
CSMD3-202ENST00000339701 EIF2B4Q9UI10 523 aaKnown RBP3.13□□□□□ -1.91
CSMD3-202ENST00000339701 GTF2A1LQ9UNN4 478 aa3.13□□□□□ -1.91
CSMD3-202ENST00000339701 ADAM18Q9Y3Q7 739 aa3.13□□□□□ -1.91
CSMD3-202ENST00000339701 ARL5AQ9Y689 179 aa3.13□□□□□ -1.91
CSMD3-202ENST00000339701 A0A087WWV3 80 aa3.13□□□□□ -1.91
CSMD3-202ENST00000339701 A0A1W2PRQ8 180 aa3.13□□□□□ -1.91
CSMD3-202ENST00000339701 PLSCR5A0PG75 271 aa3.13□□□□□ -1.91
CSMD3-202ENST00000339701 GLOD5A6NK44 160 aa3.13□□□□□ -1.91
CSMD3-202ENST00000339701 ZNF99A8MXY4 864 aaPredicted RBP3.13□□□□□ -1.91
CSMD3-202ENST00000339701 PRSS44E7EML9 344 aa3.13□□□□□ -1.91
CSMD3-202ENST00000339701 AQP9O43315 295 aa3.13□□□□□ -1.91
CSMD3-202ENST00000339701 ZNF14P17017 642 aaPredicted RBP3.13□□□□□ -1.91
CSMD3-202ENST00000339701 TYMPP19971 482 aa3.13□□□□□ -1.91
CSMD3-202ENST00000339701 FBLP22087 321 aaKnown RBP3.13□□□□□ -1.91
CSMD3-202ENST00000339701 CD82P27701 267 aa3.13□□□□□ -1.91
CSMD3-202ENST00000339701 CLCN4P51793 760 aa3.13□□□□□ -1.91
CSMD3-202ENST00000339701 SLC26A5P58743 744 aa3.13□□□□□ -1.91
CSMD3-202ENST00000339701 S100A10P60903 97 aa3.13□□□□□ -1.91
CSMD3-202ENST00000339701 HERV-K104P61576 105 aa3.13□□□□□ -1.91
CSMD3-202ENST00000339701 PCDH1Q08174 1060 aa3.13□□□□□ -1.91
CSMD3-202ENST00000339701 PLGLAQ15195 96 aa3.13□□□□□ -1.91
CSMD3-202ENST00000339701 DECR1Q16698 335 aa3.13□□□□□ -1.91
CSMD3-202ENST00000339701 CTC1Q2NKJ3 1217 aa3.13□□□□□ -1.91
CSMD3-202ENST00000339701 TEX44Q53QW1 395 aa3.13□□□□□ -1.91
CSMD3-202ENST00000339701 LDLRAD1Q5T700 205 aa3.13□□□□□ -1.91
CSMD3-202ENST00000339701 REP15Q6BDI9 236 aa3.13□□□□□ -1.91
CSMD3-202ENST00000339701 GPR139Q6DWJ6 353 aa3.13□□□□□ -1.91
CSMD3-202ENST00000339701 SERINC5Q86VE9 423 aa3.13□□□□□ -1.91
CSMD3-202ENST00000339701 FITM2Q8N6M3 262 aa3.13□□□□□ -1.91
CSMD3-202ENST00000339701 NETO2Q8NC67 525 aa3.13□□□□□ -1.91
CSMD3-202ENST00000339701 DUSP19Q8WTR2 217 aa3.13□□□□□ -1.91
CSMD3-202ENST00000339701 ART4Q93070 314 aa3.13□□□□□ -1.91
CSMD3-202ENST00000339701 LINGO1Q96FE5 620 aa3.13□□□□□ -1.91
CSMD3-202ENST00000339701 MED30Q96HR3 178 aa3.13□□□□□ -1.91
CSMD3-202ENST00000339701 OR4K3Q96R72 315 aa3.13□□□□□ -1.91
CSMD3-202ENST00000339701 MECRQ9BV79 373 aa3.13□□□□□ -1.91
CSMD3-202ENST00000339701 EQTNQ9NQ60 294 aa3.13□□□□□ -1.91
CSMD3-202ENST00000339701 PIH1D1Q9NWS0 290 aaKnown RBP3.13□□□□□ -1.91
CSMD3-202ENST00000339701 SLCO3A1Q9UIG8 710 aa3.13□□□□□ -1.91
CSMD3-202ENST00000339701 ZNF391Q9UJN7 358 aa3.13□□□□□ -1.91
CSMD3-202ENST00000339701 SCN5AQ14524 2016 aa3.13□□□□□ -1.91
CSMD3-202ENST00000339701 LOC102723532A0A0G2JNH3 316 aa3.13□□□□□ -1.91
CSMD3-202ENST00000339701 A0A1B0GUH1 482 aa3.13□□□□□ -1.91
CSMD3-202ENST00000339701 C2orf72A6NCS6 295 aa3.13□□□□□ -1.91
CSMD3-202ENST00000339701 E7EQ34 232 aa3.13□□□□□ -1.91
CSMD3-202ENST00000339701 TNFRSF11BO00300 401 aa3.13□□□□□ -1.91
CSMD3-202ENST00000339701 GSC2O15499 205 aa3.13□□□□□ -1.91
CSMD3-202ENST00000339701 IFI6P09912 130 aa3.13□□□□□ -1.91
CSMD3-202ENST00000339701 KITP10721 976 aa3.13□□□□□ -1.91
CSMD3-202ENST00000339701 HGFP14210 728 aa3.13□□□□□ -1.91
CSMD3-202ENST00000339701 TFEBP19484 476 aa3.13□□□□□ -1.91
CSMD3-202ENST00000339701 NKX6-1P78426 367 aaPredicted RBP3.13□□□□□ -1.91
CSMD3-202ENST00000339701 H3F3AP84243 136 aa3.13□□□□□ -1.91
CSMD3-202ENST00000339701 CDK3Q00526 305 aa3.13□□□□□ -1.91
CSMD3-202ENST00000339701 TAGLNQ01995 201 aaKnown RBP3.13□□□□□ -1.91
CSMD3-202ENST00000339701 CACNG1Q06432 222 aa3.13□□□□□ -1.91
CSMD3-202ENST00000339701 ELAVL3Q14576 367 aaKnown RBP3.13□□□□□ -1.91
CSMD3-202ENST00000339701 MAD2L1BPQ15013 274 aaPredicted RBP3.13□□□□□ -1.91
CSMD3-202ENST00000339701 ATG9BQ674R7 924 aa3.13□□□□□ -1.91
CSMD3-202ENST00000339701 ENPP6Q6UWR7 440 aa3.13□□□□□ -1.91
CSMD3-202ENST00000339701 CYP4V2Q6ZWL3 525 aaPredicted RBP3.13□□□□□ -1.91
CSMD3-202ENST00000339701 PPP1R3BQ86XI6 285 aa3.13□□□□□ -1.91
CSMD3-202ENST00000339701 DND1Q8IYX4 353 aaKnown RBP3.13□□□□□ -1.91
CSMD3-202ENST00000339701 SLC25A41Q8N5S1 370 aa3.13□□□□□ -1.91
CSMD3-202ENST00000339701 NKAIN3Q8N8D7 197 aa3.13□□□□□ -1.91
CSMD3-202ENST00000339701 GMPPAQ96IJ6 420 aaPredicted RBP3.13□□□□□ -1.91
CSMD3-202ENST00000339701 OR14A2Q96R54 314 aa3.13□□□□□ -1.91
CSMD3-202ENST00000339701 PHOX2BQ99453 314 aa3.13□□□□□ -1.91
CSMD3-202ENST00000339701 TXNDC17Q9BRA2 123 aa3.13□□□□□ -1.91
CSMD3-202ENST00000339701 DCUN1D5Q9BTE7 237 aa3.13□□□□□ -1.91
CSMD3-202ENST00000339701 BCL2L14Q9BZR8 327 aa3.13□□□□□ -1.91
CSMD3-202ENST00000339701 CHRDQ9H2X0 955 aa3.13□□□□□ -1.91
CSMD3-202ENST00000339701 ANKRD19PQ9H560 264 aa3.13□□□□□ -1.91
CSMD3-202ENST00000339701 ZGRF1Q86YA3 2104 aa3.13□□□□□ -1.91
CSMD3-202ENST00000339701 COL6A6A6NMZ7 2263 aa3.13□□□□□ -1.91
CSMD3-202ENST00000339701 hCG_1807616A0A1W2PRN6 198 aa3.13□□□□□ -1.91
CSMD3-202ENST00000339701 LINC01549A6NIU2 74 aa3.13□□□□□ -1.91
CSMD3-202ENST00000339701 A8MVJ9 347 aa3.13□□□□□ -1.91
CSMD3-202ENST00000339701 SPATA31C2B4DYI2 1134 aa3.13□□□□□ -1.91
CSMD3-202ENST00000339701 M0QZK8 103 aa3.13□□□□□ -1.91
CSMD3-202ENST00000339701 MAGEB4O15481 346 aaPredicted RBP3.13□□□□□ -1.91
CSMD3-202ENST00000339701 GGCTO75223 188 aaKnown RBP3.13□□□□□ -1.91
CSMD3-202ENST00000339701 SC5DO75845 299 aa3.13□□□□□ -1.91
CSMD3-202ENST00000339701 ABHD16AO95870 558 aa3.13□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms