RNA–Protein interactions for RNA: ENST00000339255.2

NIPAL3-202, Transcript of NIPA like domain containing 3, humanhuman

TSL 5 BASIC

Gene NIPAL3, Length 1,676 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-202ENST00000339255 BTBD2Q9BX70 525 aa13.5□□□□□ -0.25
NIPAL3-202ENST00000339255 DENND2DQ9H6A0 471 aaPredicted RBP13.5□□□□□ -0.25
NIPAL3-202ENST00000339255 USP22Q9UPT9 525 aa13.5□□□□□ -0.25
NIPAL3-202ENST00000339255 WDFY3Q8IZQ1 3526 aa13.49□□□□□ -0.25
NIPAL3-202ENST00000339255 IGHV3-20A0A0C4DH32 117 aa13.49□□□□□ -0.25
NIPAL3-202ENST00000339255 LOC101059948A0A1B0GTJ6 334 aa13.49□□□□□ -0.25
NIPAL3-202ENST00000339255 AQP12BA6NM10 295 aa13.49□□□□□ -0.25
NIPAL3-202ENST00000339255 SOCS6O14544 535 aa13.49□□□□□ -0.25
NIPAL3-202ENST00000339255 SLC28A2O43868 658 aa13.49□□□□□ -0.25
NIPAL3-202ENST00000339255 PDE9AO76083 593 aa13.49□□□□□ -0.25
NIPAL3-202ENST00000339255 BCHEP06276 602 aa13.49□□□□□ -0.25
NIPAL3-202ENST00000339255 GUSBP08236 651 aa13.49□□□□□ -0.25
NIPAL3-202ENST00000339255 COX6A1P12074 109 aa13.49□□□□□ -0.25
NIPAL3-202ENST00000339255 ICAM2P13598 275 aa13.49□□□□□ -0.25
NIPAL3-202ENST00000339255 HOXB6P17509 224 aaKnown RBP13.49□□□□□ -0.25
NIPAL3-202ENST00000339255 PPICP45877 212 aa13.49□□□□□ -0.25
NIPAL3-202ENST00000339255 SLC26A5P58743 744 aa13.49□□□□□ -0.25
NIPAL3-202ENST00000339255 RPS18P62269 152 aaKnown RBP13.49□□□□□ -0.25
NIPAL3-202ENST00000339255 PSG6Q00889 435 aa13.49□□□□□ -0.25
NIPAL3-202ENST00000339255 KPNB1Q14974 876 aaKnown RBP13.49□□□□□ -0.25
NIPAL3-202ENST00000339255 FAM69BQ5VUD6 431 aa13.49□□□□□ -0.25
NIPAL3-202ENST00000339255 HSDL2Q6YN16 418 aa13.49□□□□□ -0.25
NIPAL3-202ENST00000339255 CCDC80Q76M96 950 aa13.49□□□□□ -0.25
NIPAL3-202ENST00000339255 PPP1R32Q7Z5V6 425 aa13.49□□□□□ -0.25
NIPAL3-202ENST00000339255 PATL1Q86TB9 770 aaKnown RBP13.49□□□□□ -0.25
NIPAL3-202ENST00000339255 AQP12AQ8IXF9 295 aa13.49□□□□□ -0.25
NIPAL3-202ENST00000339255 EID3Q8N140 333 aa13.49□□□□□ -0.25
NIPAL3-202ENST00000339255 BHLHE22Q8NFJ8 381 aaPredicted RBP13.49□□□□□ -0.25
NIPAL3-202ENST00000339255 NFKBIDQ8NI38 313 aa13.49□□□□□ -0.25
NIPAL3-202ENST00000339255 FBXO30Q8TB52 745 aa13.49□□□□□ -0.25
NIPAL3-202ENST00000339255 GPR151Q8TDV0 419 aa13.49□□□□□ -0.25
NIPAL3-202ENST00000339255 CDS1Q92903 461 aa13.49□□□□□ -0.25
NIPAL3-202ENST00000339255 RNF145Q96MT1 663 aa13.49□□□□□ -0.25
NIPAL3-202ENST00000339255 TREX2Q9BQ50 279 aaPredicted RBP13.49□□□□□ -0.25
NIPAL3-202ENST00000339255 BCL2L10Q9HD36 194 aa13.49□□□□□ -0.25
NIPAL3-202ENST00000339255 POLE3Q9NRF9 147 aa13.49□□□□□ -0.25
NIPAL3-202ENST00000339255 RYDENQ9NUL5 291 aaKnown RBP13.49□□□□□ -0.25
NIPAL3-202ENST00000339255 KLK13Q9UKR3 277 aa13.49□□□□□ -0.25
NIPAL3-202ENST00000339255 GPR55Q9Y2T6 319 aaPredicted RBP13.49□□□□□ -0.25
NIPAL3-202ENST00000339255 CEP295Q9C0D2 2601 aa13.49□□□□□ -0.25
NIPAL3-202ENST00000339255 NINQ8N4C6 2090 aa13.48□□□□□ -0.25
NIPAL3-202ENST00000339255 NSG1A0A0A6YYJ2 146 aa13.48□□□□□ -0.25
NIPAL3-202ENST00000339255 C2orf92A0A1B0GVN3 265 aa13.48□□□□□ -0.25
NIPAL3-202ENST00000339255 FRG2CA6NGY1 282 aa13.48□□□□□ -0.25
NIPAL3-202ENST00000339255 A8MVJ9 347 aa13.48□□□□□ -0.25
NIPAL3-202ENST00000339255 ACOX3O15254 700 aa13.48□□□□□ -0.25
NIPAL3-202ENST00000339255 CREG1O75629 220 aa13.48□□□□□ -0.25
NIPAL3-202ENST00000339255 CT45A8P0DMV1 189 aa13.48□□□□□ -0.25
NIPAL3-202ENST00000339255 CT45A9P0DMV2 189 aa13.48□□□□□ -0.25
NIPAL3-202ENST00000339255 DRD5P21918 477 aa13.48□□□□□ -0.25
NIPAL3-202ENST00000339255 OTX2P32243 289 aa13.48□□□□□ -0.25
NIPAL3-202ENST00000339255 GABRA3P34903 492 aa13.48□□□□□ -0.25
NIPAL3-202ENST00000339255 CLCN2P51788 898 aa13.48□□□□□ -0.25
NIPAL3-202ENST00000339255 PCBP3P57721 371 aaKnown RBP13.48□□□□□ -0.25
NIPAL3-202ENST00000339255 AP2B1P63010 937 aa13.48□□□□□ -0.25
NIPAL3-202ENST00000339255 POU6F2P78424 691 aaPredicted RBP13.48□□□□□ -0.25
NIPAL3-202ENST00000339255 EBPQ15125 230 aaKnown RBP13.48□□□□□ -0.25
NIPAL3-202ENST00000339255 ARHGAP11BQ3KRB8 267 aa13.48□□□□□ -0.25
NIPAL3-202ENST00000339255 CYP27C1Q4G0S4 372 aa13.48□□□□□ -0.25
NIPAL3-202ENST00000339255 CT45A2Q5DJT8 189 aa13.48□□□□□ -0.25
NIPAL3-202ENST00000339255 MRGPREQ86SM8 312 aa13.48□□□□□ -0.25
NIPAL3-202ENST00000339255 KRT73Q86Y46 540 aa13.48□□□□□ -0.25
NIPAL3-202ENST00000339255 C9orf40Q8IXQ3 194 aa13.48□□□□□ -0.25
NIPAL3-202ENST00000339255 BBS10Q8TAM1 723 aa13.48□□□□□ -0.25
NIPAL3-202ENST00000339255 NUBPLQ8TB37 319 aa13.48□□□□□ -0.25
NIPAL3-202ENST00000339255 PMM1Q92871 262 aa13.48□□□□□ -0.25
NIPAL3-202ENST00000339255 FAM162AQ96A26 154 aa13.48□□□□□ -0.25
NIPAL3-202ENST00000339255 SLC35A4Q96G79 324 aa13.48□□□□□ -0.25
NIPAL3-202ENST00000339255 TMEM19Q96HH6 336 aa13.48□□□□□ -0.25
NIPAL3-202ENST00000339255 ZNF607Q96SK3 696 aa13.48□□□□□ -0.25
NIPAL3-202ENST00000339255 ITPAQ9BY32 194 aa13.48□□□□□ -0.25
NIPAL3-202ENST00000339255 WWTR1Q9GZV5 400 aa13.48□□□□□ -0.25
NIPAL3-202ENST00000339255 WASF3Q9UPY6 502 aa13.48□□□□□ -0.25
NIPAL3-202ENST00000339255 DTX4Q9Y2E6 619 aa13.48□□□□□ -0.25
NIPAL3-202ENST00000339255 DCHS1Q96JQ0 3298 aa13.48□□□□□ -0.25
NIPAL3-202ENST00000339255 EXPH5Q8NEV8 1989 aa13.47□□□□□ -0.25
NIPAL3-202ENST00000339255 A0A0G2JPF8 293 aa13.47□□□□□ -0.25
NIPAL3-202ENST00000339255 HNRNPCL2B2RXH8 293 aa13.47□□□□□ -0.25
NIPAL3-202ENST00000339255 HNRNPCL3B7ZW38 293 aa13.47□□□□□ -0.25
NIPAL3-202ENST00000339255 PEX12O00623 359 aa13.47□□□□□ -0.25
NIPAL3-202ENST00000339255 STX11O75558 287 aa13.47□□□□□ -0.25
NIPAL3-202ENST00000339255 PGM3O95394 542 aa13.47□□□□□ -0.25
NIPAL3-202ENST00000339255 HPP00738 406 aa13.47□□□□□ -0.25
NIPAL3-202ENST00000339255 HNRNPCL4P0DMR1 293 aa13.47□□□□□ -0.25
NIPAL3-202ENST00000339255 ETS2P15036 469 aa13.47□□□□□ -0.25
NIPAL3-202ENST00000339255 NCK1P16333 377 aa13.47□□□□□ -0.25
NIPAL3-202ENST00000339255 ATP6V1B2P21281 511 aa13.47□□□□□ -0.25
NIPAL3-202ENST00000339255 F8A1P23610 371 aa13.47□□□□□ -0.25
NIPAL3-202ENST00000339255 TRHRP34981 398 aaPredicted RBP13.47□□□□□ -0.25
NIPAL3-202ENST00000339255 SOX11P35716 441 aa13.47□□□□□ -0.25
NIPAL3-202ENST00000339255 RNF4P78317 190 aa13.47□□□□□ -0.25
NIPAL3-202ENST00000339255 ELF3P78545 371 aaPredicted RBP13.47□□□□□ -0.25
NIPAL3-202ENST00000339255 BTBD16Q32M84 506 aa13.47□□□□□ -0.25
NIPAL3-202ENST00000339255 GPAT3Q53EU6 434 aa13.47□□□□□ -0.25
NIPAL3-202ENST00000339255 DCST2Q5T1A1 773 aa13.47□□□□□ -0.25
NIPAL3-202ENST00000339255 AP1ARQ63HQ0 302 aa13.47□□□□□ -0.25
NIPAL3-202ENST00000339255 CYP2R1Q6VVX0 501 aa13.47□□□□□ -0.25
NIPAL3-202ENST00000339255 LRRC74BQ6ZQY2 392 aa13.47□□□□□ -0.25
NIPAL3-202ENST00000339255 WDR53Q7Z5U6 358 aaPredicted RBP13.47□□□□□ -0.25
NIPAL3-202ENST00000339255 SLC44A2Q8IWA5 706 aaPredicted RBP13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms