RNA–Protein interactions for RNA: ENST00000338468.7

PRKN-201, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene PRKN, Length 1,276 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-201ENST00000338468 RILPQ96NA2 401 aa13.98□□□□□ -0.17
PRKN-201ENST00000338468 DMRTA2Q96SC8 542 aa13.98□□□□□ -0.17
PRKN-201ENST00000338468 C1orf50Q9BV19 199 aa13.98□□□□□ -0.17
PRKN-201ENST00000338468 STMN4Q9H169 189 aaPredicted RBP13.98□□□□□ -0.17
PRKN-201ENST00000338468 BOKQ9UMX3 212 aaPredicted RBP13.98□□□□□ -0.17
PRKN-201ENST00000338468 MEMO1Q9Y316 297 aa13.98□□□□□ -0.17
PRKN-201ENST00000338468 RAP2CQ9Y3L5 183 aa13.98□□□□□ -0.17
PRKN-201ENST00000338468 NCOA6Q14686 2063 aaPredicted RBP13.98□□□□□ -0.17
PRKN-201ENST00000338468 ADGRG4Q8IZF6 3080 aa13.98□□□□□ -0.17
PRKN-201ENST00000338468 DNAJC13O75165 2243 aa13.98□□□□□ -0.17
PRKN-201ENST00000338468 PCNX1Q96RV3 2341 aa13.97□□□□□ -0.17
PRKN-201ENST00000338468 PDPK1O15530 556 aa13.97□□□□□ -0.17
PRKN-201ENST00000338468 TSPAN2O60636 221 aa13.97□□□□□ -0.17
PRKN-201ENST00000338468 IFI6P09912 130 aa13.97□□□□□ -0.17
PRKN-201ENST00000338468 ENDOUP21128 410 aaKnown RBP13.97□□□□□ -0.17
PRKN-201ENST00000338468 GRK2P25098 689 aa13.97□□□□□ -0.17
PRKN-201ENST00000338468 ASMTP46597 345 aa13.97□□□□□ -0.17
PRKN-201ENST00000338468 CASP6P55212 293 aa13.97□□□□□ -0.17
PRKN-201ENST00000338468 MAGOHP61326 146 aaKnown RBP13.97□□□□□ -0.17
PRKN-201ENST00000338468 PSG6Q00889 435 aa13.97□□□□□ -0.17
PRKN-201ENST00000338468 BST1Q10588 318 aa13.97□□□□□ -0.17
PRKN-201ENST00000338468 PTGR1Q14914 329 aa13.97□□□□□ -0.17
PRKN-201ENST00000338468 IL23RQ5VWK5 629 aa13.97□□□□□ -0.17
PRKN-201ENST00000338468 ARHGAP11AQ6P4F7 1023 aa13.97□□□□□ -0.17
PRKN-201ENST00000338468 NUP54Q7Z3B4 507 aa13.97□□□□□ -0.17
PRKN-201ENST00000338468 CD163Q86VB7 1156 aa13.97□□□□□ -0.17
PRKN-201ENST00000338468 PPCDCQ96CD2 204 aa13.97□□□□□ -0.17
PRKN-201ENST00000338468 UBQLN3Q9H347 655 aa13.97□□□□□ -0.17
PRKN-201ENST00000338468 TAS2R9Q9NYW1 312 aa13.97□□□□□ -0.17
PRKN-201ENST00000338468 ATP6V1HQ9UI12 483 aa13.97□□□□□ -0.17
PRKN-201ENST00000338468 EPB41L3Q9Y2J2 1087 aaPredicted RBP13.97□□□□□ -0.17
PRKN-201ENST00000338468 CELSR1Q9NYQ6 3014 aa13.96□□□□□ -0.17
PRKN-201ENST00000338468 OR6C70A6NIJ9 312 aa13.96□□□□□ -0.17
PRKN-201ENST00000338468 PRSS44E7EML9 344 aa13.96□□□□□ -0.17
PRKN-201ENST00000338468 PRRG2O14669 202 aa13.96□□□□□ -0.17
PRKN-201ENST00000338468 SCAMP2O15127 329 aaKnown RBP13.96□□□□□ -0.17
PRKN-201ENST00000338468 COQ9O75208 318 aa13.96□□□□□ -0.17
PRKN-201ENST00000338468 SNX4O95219 450 aa13.96□□□□□ -0.17
PRKN-201ENST00000338468 TPOP07202 933 aa13.96□□□□□ -0.17
PRKN-201ENST00000338468 CDK9P50750 372 aaKnown RBP13.96□□□□□ -0.17
PRKN-201ENST00000338468 SLC18A1P54219 525 aa13.96□□□□□ -0.17
PRKN-201ENST00000338468 HSPB3Q12988 150 aa13.96□□□□□ -0.17
PRKN-201ENST00000338468 STX3Q13277 289 aa13.96□□□□□ -0.17
PRKN-201ENST00000338468 SLC10A1Q14973 349 aa13.96□□□□□ -0.17
PRKN-201ENST00000338468 CDSNQ15517 529 aa13.96□□□□□ -0.17
PRKN-201ENST00000338468 PDCD2Q16342 344 aaPredicted RBP13.96□□□□□ -0.17
PRKN-201ENST00000338468 WDR53Q7Z5U6 358 aaPredicted RBP13.96□□□□□ -0.17
PRKN-201ENST00000338468 SLC44A2Q8IWA5 706 aaPredicted RBP13.96□□□□□ -0.17
PRKN-201ENST00000338468 RIMKLAQ8IXN7 391 aa13.96□□□□□ -0.17
PRKN-201ENST00000338468 MARVELD2Q8N4S9 558 aa13.96□□□□□ -0.17
PRKN-201ENST00000338468 KRTCAP2Q8N6L1 136 aa13.96□□□□□ -0.17
PRKN-201ENST00000338468 FNDC5Q8NAU1 212 aa13.96□□□□□ -0.17
PRKN-201ENST00000338468 OR7A2PQ8NGA2 310 aa13.96□□□□□ -0.17
PRKN-201ENST00000338468 RNF138Q8WVD3 245 aa13.96□□□□□ -0.17
PRKN-201ENST00000338468 TUBGCP3Q96CW5 907 aa13.96□□□□□ -0.17
PRKN-201ENST00000338468 MTERF3Q96E29 417 aa13.96□□□□□ -0.17
PRKN-201ENST00000338468 SLC35A4Q96G79 324 aa13.96□□□□□ -0.17
PRKN-201ENST00000338468 TMEM41AQ96HV5 264 aa13.96□□□□□ -0.17
PRKN-201ENST00000338468 ZNF597Q96LX8 424 aa13.96□□□□□ -0.17
PRKN-201ENST00000338468 JSRP1Q96MG2 331 aaPredicted RBP13.96□□□□□ -0.17
PRKN-201ENST00000338468 PAIP2Q9BPZ3 127 aaKnown RBP13.96□□□□□ -0.17
PRKN-201ENST00000338468 GALNT9Q9HCQ5 603 aa13.96□□□□□ -0.17
PRKN-201ENST00000338468 DDX18Q9NVP1 670 aaKnown RBP13.96□□□□□ -0.17
PRKN-201ENST00000338468 SH3BP4Q9P0V3 963 aa13.96□□□□□ -0.17
PRKN-201ENST00000338468 SPRR3Q9UBC9 169 aa13.96□□□□□ -0.17
PRKN-201ENST00000338468 TNFRSF10DQ9UBN6 386 aa13.96□□□□□ -0.17
PRKN-201ENST00000338468 SUCOQ9UBS9 1254 aaKnown RBP13.96□□□□□ -0.17
PRKN-201ENST00000338468 CSMD2Q7Z408 3487 aa13.96□□□□□ -0.18
PRKN-201ENST00000338468 GIMAP1-GIMAP5A0A087WTJ2 511 aa13.95□□□□□ -0.18
PRKN-201ENST00000338468 C2orf72A6NCS6 295 aa13.95□□□□□ -0.18
PRKN-201ENST00000338468 NPIPA2E9PIF3 369 aa13.95□□□□□ -0.18
PRKN-201ENST00000338468 E9PLN8 166 aa13.95□□□□□ -0.18
PRKN-201ENST00000338468 NPIPA3F8WFD2 350 aa13.95□□□□□ -0.18
PRKN-201ENST00000338468 AQP7O14520 342 aa13.95□□□□□ -0.18
PRKN-201ENST00000338468 SUSD5O60279 629 aa13.95□□□□□ -0.18
PRKN-201ENST00000338468 ICOSLGO75144 302 aa13.95□□□□□ -0.18
PRKN-201ENST00000338468 LAMP1P11279 417 aa13.95□□□□□ -0.18
PRKN-201ENST00000338468 EFNA1P20827 205 aaPredicted RBP13.95□□□□□ -0.18
PRKN-201ENST00000338468 MAPK1P28482 360 aa13.95□□□□□ -0.18
PRKN-201ENST00000338468 MAP3K8P41279 467 aa13.95□□□□□ -0.18
PRKN-201ENST00000338468 RPL14P50914 215 aaKnown RBP13.95□□□□□ -0.18
PRKN-201ENST00000338468 RPP38P78345 283 aaKnown RBP13.95□□□□□ -0.18
PRKN-201ENST00000338468 EMX2Q04743 252 aa13.95□□□□□ -0.18
PRKN-201ENST00000338468 ZNF155Q12901 538 aaPredicted RBP13.95□□□□□ -0.18
PRKN-201ENST00000338468 HHATQ5VTY9 493 aa13.95□□□□□ -0.18
PRKN-201ENST00000338468 TMEM198Q66K66 360 aa13.95□□□□□ -0.18
PRKN-201ENST00000338468 SP5Q6BEB4 398 aaPredicted RBP13.95□□□□□ -0.18
PRKN-201ENST00000338468 PAOXQ6QHF9 649 aa13.95□□□□□ -0.18
PRKN-201ENST00000338468 MRGPRGQ86SM5 289 aa13.95□□□□□ -0.18
PRKN-201ENST00000338468 RPRMLQ8N4K4 120 aa13.95□□□□□ -0.18
PRKN-201ENST00000338468 MGARPQ8TDB4 240 aa13.95□□□□□ -0.18
PRKN-201ENST00000338468 HOXB13Q92826 284 aaPredicted RBP13.95□□□□□ -0.18
PRKN-201ENST00000338468 ARL8AQ96BM9 186 aa13.95□□□□□ -0.18
PRKN-201ENST00000338468 GIMAP5Q96F15 307 aa13.95□□□□□ -0.18
PRKN-201ENST00000338468 PPP1R36Q96LQ0 422 aa13.95□□□□□ -0.18
PRKN-201ENST00000338468 COL21A1Q96P44 957 aa13.95□□□□□ -0.18
PRKN-201ENST00000338468 GNRHR2Q96P88 292 aa13.95□□□□□ -0.18
PRKN-201ENST00000338468 ADOQ96SZ5 270 aa13.95□□□□□ -0.18
PRKN-201ENST00000338468 VKORC1Q9BQB6 163 aa13.95□□□□□ -0.18
PRKN-201ENST00000338468 LMF2Q9BU23 707 aaKnown RBP13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms