RNA–Protein interactions for RNA: ENST00000337841.4

SPTLC1-202, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SPTLC1, Length 946 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-202ENST00000337841 PSG6Q00889 435 aa10.99□□□□□ -0.65
SPTLC1-202ENST00000337841 PLCXD2Q0VAA5 305 aa10.99□□□□□ -0.65
SPTLC1-202ENST00000337841 CYLC2Q14093 348 aaPredicted RBP10.99□□□□□ -0.65
SPTLC1-202ENST00000337841 LASP1Q14847 261 aaKnown RBP10.99□□□□□ -0.65
SPTLC1-202ENST00000337841 NNATQ16517 81 aa10.99□□□□□ -0.65
SPTLC1-202ENST00000337841 DECR1Q16698 335 aa10.99□□□□□ -0.65
SPTLC1-202ENST00000337841 ZNF791Q3KP31 576 aaPredicted RBP10.99□□□□□ -0.65
SPTLC1-202ENST00000337841 MMEL1Q495T6 779 aa10.99□□□□□ -0.65
SPTLC1-202ENST00000337841 ZNF468Q5VIY5 522 aaPredicted RBP10.99□□□□□ -0.65
SPTLC1-202ENST00000337841 SLC22A10Q63ZE4 541 aa10.99□□□□□ -0.65
SPTLC1-202ENST00000337841 SPINK14Q6IE38 97 aa10.99□□□□□ -0.65
SPTLC1-202ENST00000337841 CDC73Q6P1J9 531 aa10.99□□□□□ -0.65
SPTLC1-202ENST00000337841 RTL4Q6ZR62 310 aa10.99□□□□□ -0.65
SPTLC1-202ENST00000337841 GK5Q6ZS86 529 aa10.99□□□□□ -0.65
SPTLC1-202ENST00000337841 Q6ZS92 163 aa10.99□□□□□ -0.65
SPTLC1-202ENST00000337841 ANKS4BQ8N8V4 417 aa10.99□□□□□ -0.65
SPTLC1-202ENST00000337841 JADE3Q92613 823 aa10.99□□□□□ -0.65
SPTLC1-202ENST00000337841 PNPLA2Q96AD5 504 aa10.99□□□□□ -0.65
SPTLC1-202ENST00000337841 SPACA9Q96E40 222 aaPredicted RBP10.99□□□□□ -0.65
SPTLC1-202ENST00000337841 OMA1Q96E52 524 aa10.99□□□□□ -0.65
SPTLC1-202ENST00000337841 NEURL3Q96EH8 262 aa10.99□□□□□ -0.65
SPTLC1-202ENST00000337841 GIMAP5Q96F15 307 aa10.99□□□□□ -0.65
SPTLC1-202ENST00000337841 SLC35G5Q96KT7 338 aa10.99□□□□□ -0.65
SPTLC1-202ENST00000337841 STACQ99469 402 aa10.99□□□□□ -0.65
SPTLC1-202ENST00000337841 YIPF4Q9BSR8 244 aa10.99□□□□□ -0.65
SPTLC1-202ENST00000337841 TRIM4Q9C037 500 aa10.99□□□□□ -0.65
SPTLC1-202ENST00000337841 PIGUQ9H490 435 aa10.99□□□□□ -0.65
SPTLC1-202ENST00000337841 SLC52A3Q9NQ40 469 aa10.99□□□□□ -0.65
SPTLC1-202ENST00000337841 SERHLQ9NQF3 203 aa10.99□□□□□ -0.65
SPTLC1-202ENST00000337841 GPATCH2Q9NW75 528 aa10.99□□□□□ -0.65
SPTLC1-202ENST00000337841 CBLCQ9ULV8 474 aa10.99□□□□□ -0.65
SPTLC1-202ENST00000337841 ASPMQ8IZT6 3477 aa10.99□□□□□ -0.65
SPTLC1-202ENST00000337841 USP24Q9UPU5 2620 aa10.98□□□□□ -0.65
SPTLC1-202ENST00000337841 HS6ST1O60243 411 aa10.98□□□□□ -0.65
SPTLC1-202ENST00000337841 ZNF354AO60765 605 aaPredicted RBP10.98□□□□□ -0.65
SPTLC1-202ENST00000337841 PPM1BO75688 479 aa10.98□□□□□ -0.65
SPTLC1-202ENST00000337841 P04436 131 aa10.98□□□□□ -0.65
SPTLC1-202ENST00000337841 SP1P08047 785 aa10.98□□□□□ -0.65
SPTLC1-202ENST00000337841 PPIBP23284 216 aaKnown RBP10.98□□□□□ -0.65
SPTLC1-202ENST00000337841 IL12BP29460 328 aa10.98□□□□□ -0.65
SPTLC1-202ENST00000337841 MAP3K8P41279 467 aa10.98□□□□□ -0.65
SPTLC1-202ENST00000337841 CDKN2CP42773 168 aa10.98□□□□□ -0.65
SPTLC1-202ENST00000337841 ST13P50502 369 aaKnown RBP10.98□□□□□ -0.65
SPTLC1-202ENST00000337841 PNLIPRP2P54317 469 aa10.98□□□□□ -0.65
SPTLC1-202ENST00000337841 EFR3AQ14156 821 aa10.98□□□□□ -0.65
SPTLC1-202ENST00000337841 ZNF169Q14929 603 aaPredicted RBP10.98□□□□□ -0.65
SPTLC1-202ENST00000337841 PLEKHN1Q494U1 663 aaPredicted RBP10.98□□□□□ -0.65
SPTLC1-202ENST00000337841 ZNF766Q5HY98 468 aa10.98□□□□□ -0.65
SPTLC1-202ENST00000337841 PAGE3Q5JUK9 113 aa10.98□□□□□ -0.65
SPTLC1-202ENST00000337841 ATAD3BQ5T9A4 648 aa10.98□□□□□ -0.65
SPTLC1-202ENST00000337841 SAXO2Q658L1 398 aa10.98□□□□□ -0.65
SPTLC1-202ENST00000337841 LYPD8Q6UX82 237 aa10.98□□□□□ -0.65
SPTLC1-202ENST00000337841 ANGPTL8Q6UXH0 198 aa10.98□□□□□ -0.65
SPTLC1-202ENST00000337841 NPSR1Q6W5P4 371 aa10.98□□□□□ -0.65
SPTLC1-202ENST00000337841 WDR53Q7Z5U6 358 aaPredicted RBP10.98□□□□□ -0.65
SPTLC1-202ENST00000337841 PTRH1Q86Y79 214 aaKnown RBP10.98□□□□□ -0.65
SPTLC1-202ENST00000337841 PRR22Q8IZ63 422 aa10.98□□□□□ -0.65
SPTLC1-202ENST00000337841 CLEC4FQ8N1N0 589 aa10.98□□□□□ -0.65
SPTLC1-202ENST00000337841 COX18Q8N8Q8 333 aa10.98□□□□□ -0.65
SPTLC1-202ENST00000337841 GOLM1Q8NBJ4 401 aa10.98□□□□□ -0.65
SPTLC1-202ENST00000337841 TMEM178AQ8NBL3 297 aa10.98□□□□□ -0.65
SPTLC1-202ENST00000337841 PCYOX1LQ8NBM8 494 aa10.98□□□□□ -0.65
SPTLC1-202ENST00000337841 SLC16A11Q8NCK7 471 aa10.98□□□□□ -0.65
SPTLC1-202ENST00000337841 CCDC197Q8NCU1 140 aa10.98□□□□□ -0.65
SPTLC1-202ENST00000337841 FAM13CQ8NE31 585 aa10.98□□□□□ -0.65
SPTLC1-202ENST00000337841 RP9Q8TA86 221 aaKnown RBP10.98□□□□□ -0.65
SPTLC1-202ENST00000337841 MIPOL1Q8TD10 442 aa10.98□□□□□ -0.65
SPTLC1-202ENST00000337841 HOXB13Q92826 284 aaPredicted RBP10.98□□□□□ -0.65
SPTLC1-202ENST00000337841 TMBIM1Q969X1 311 aa10.98□□□□□ -0.65
SPTLC1-202ENST00000337841 TMCO6Q96DC7 493 aa10.98□□□□□ -0.65
SPTLC1-202ENST00000337841 SLC35A4Q96G79 324 aa10.98□□□□□ -0.65
SPTLC1-202ENST00000337841 COL21A1Q96P44 957 aa10.98□□□□□ -0.65
SPTLC1-202ENST00000337841 SIGLEC12Q96PQ1 595 aa10.98□□□□□ -0.65
SPTLC1-202ENST00000337841 LRRC37BQ96QE4 947 aa10.98□□□□□ -0.65
SPTLC1-202ENST00000337841 SECISBP2Q96T21 854 aaKnown RBP10.98□□□□□ -0.65
SPTLC1-202ENST00000337841 BTBD2Q9BX70 525 aa10.98□□□□□ -0.65
SPTLC1-202ENST00000337841 PAIP1Q9H074 479 aaKnown RBP10.98□□□□□ -0.65
SPTLC1-202ENST00000337841 RAD21L1Q9H4I0 556 aa10.98□□□□□ -0.65
SPTLC1-202ENST00000337841 TPT1P8Q9HAU6 139 aa10.98□□□□□ -0.65
SPTLC1-202ENST00000337841 DUSP22Q9NRW4 184 aa10.98□□□□□ -0.65
SPTLC1-202ENST00000337841 EXD2Q9NVH0 621 aa10.98□□□□□ -0.65
SPTLC1-202ENST00000337841 CNIH4Q9P003 139 aa10.98□□□□□ -0.65
SPTLC1-202ENST00000337841 ARMCX1Q9P291 453 aa10.98□□□□□ -0.65
SPTLC1-202ENST00000337841 KLF13Q9Y2Y9 288 aaPredicted RBP10.98□□□□□ -0.65
SPTLC1-202ENST00000337841 PCDHB14Q9Y5E9 798 aa10.98□□□□□ -0.65
SPTLC1-202ENST00000337841 PCDHGB6Q9Y5F9 930 aa10.98□□□□□ -0.65
SPTLC1-202ENST00000337841 MED13Q9UHV7 2174 aa10.97□□□□□ -0.65
SPTLC1-202ENST00000337841 EPG5Q9HCE0 2579 aa10.97□□□□□ -0.65
SPTLC1-202ENST00000337841 OR6C70A6NIJ9 312 aa10.97□□□□□ -0.65
SPTLC1-202ENST00000337841 BBIP1A8MTZ0 92 aa10.97□□□□□ -0.65
SPTLC1-202ENST00000337841 EVPLLA8MZ36 301 aa10.97□□□□□ -0.65
SPTLC1-202ENST00000337841 KLRC4-KLRK1H3BQV0 150 aa10.97□□□□□ -0.65
SPTLC1-202ENST00000337841 CLIC1O00299 241 aa10.97□□□□□ -0.65
SPTLC1-202ENST00000337841 NDUFAB1O14561 156 aa10.97□□□□□ -0.65
SPTLC1-202ENST00000337841 SLC25A12O75746 678 aa10.97□□□□□ -0.65
SPTLC1-202ENST00000337841 NEURL1O76050 574 aa10.97□□□□□ -0.65
SPTLC1-202ENST00000337841 IL33O95760 270 aa10.97□□□□□ -0.65
SPTLC1-202ENST00000337841 NPPAP01160 153 aa10.97□□□□□ -0.65
SPTLC1-202ENST00000337841 ACP2P11117 423 aa10.97□□□□□ -0.65
SPTLC1-202ENST00000337841 CNR1P21554 472 aa10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms