RNA–Protein interactions for RNA: ENST00000323959.8

CSTF3-201, Transcript of cleavage stimulation factor subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSTF3, Length 2,797 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF3-201ENST00000323959 CHCHD3Q9NX63 227 aaKnown RBP6.06□□□□□ -1.44
CSTF3-201ENST00000323959 CD274Q9NZQ7 290 aa6.06□□□□□ -1.44
CSTF3-201ENST00000323959 ABCD2Q9UBJ2 740 aa6.06□□□□□ -1.44
CSTF3-201ENST00000323959 TMEFF2Q9UIK5 374 aaPredicted RBP6.06□□□□□ -1.44
CSTF3-201ENST00000323959 KLK4Q9Y5K2 254 aa6.06□□□□□ -1.44
CSTF3-201ENST00000323959 A0A0J9YY10 115 aa6.05□□□□□ -1.44
CSTF3-201ENST00000323959 LRRC14BA6NHZ5 514 aa6.05□□□□□ -1.44
CSTF3-201ENST00000323959 UBDO15205 165 aa6.05□□□□□ -1.44
CSTF3-201ENST00000323959 RPN2P04844 631 aa6.05□□□□□ -1.44
CSTF3-201ENST00000323959 TPP2P29144 1249 aaPredicted RBP6.05□□□□□ -1.44
CSTF3-201ENST00000323959 HNF4AP41235 474 aa6.05□□□□□ -1.44
CSTF3-201ENST00000323959 CPA2P48052 419 aa6.05□□□□□ -1.44
CSTF3-201ENST00000323959 PLGLB1Q02325 96 aa6.05□□□□□ -1.44
CSTF3-201ENST00000323959 RELAQ04206 551 aa6.05□□□□□ -1.44
CSTF3-201ENST00000323959 TRAP1Q12931 704 aaKnown RBP6.05□□□□□ -1.44
CSTF3-201ENST00000323959 LAPTM5Q13571 262 aa6.05□□□□□ -1.44
CSTF3-201ENST00000323959 GTF2H3Q13889 308 aa6.05□□□□□ -1.44
CSTF3-201ENST00000323959 BTBD16Q32M84 506 aa6.05□□□□□ -1.44
CSTF3-201ENST00000323959 KHDC1Q4VXA5 237 aaKnown RBP6.05□□□□□ -1.44
CSTF3-201ENST00000323959 NSUN5P2Q63ZY6 315 aa6.05□□□□□ -1.44
CSTF3-201ENST00000323959 METRNLQ641Q3 311 aa6.05□□□□□ -1.44
CSTF3-201ENST00000323959 FCRLBQ6BAA4 426 aa6.05□□□□□ -1.44
CSTF3-201ENST00000323959 C11orf87Q6NUJ2 197 aa6.05□□□□□ -1.44
CSTF3-201ENST00000323959 RINLQ6ZS11 566 aa6.05□□□□□ -1.44
CSTF3-201ENST00000323959 CCNYL1Q8N7R7 359 aa6.05□□□□□ -1.44
CSTF3-201ENST00000323959 SPDYE1Q8NFV5 336 aaPredicted RBP6.05□□□□□ -1.44
CSTF3-201ENST00000323959 OR52E4Q8NGH9 312 aa6.05□□□□□ -1.44
CSTF3-201ENST00000323959 UCN3Q969E3 161 aa6.05□□□□□ -1.44
CSTF3-201ENST00000323959 RILPQ96NA2 401 aa6.05□□□□□ -1.44
CSTF3-201ENST00000323959 OCSTAMPQ9BR26 566 aa6.05□□□□□ -1.44
CSTF3-201ENST00000323959 PCBD2Q9H0N5 130 aa6.05□□□□□ -1.44
CSTF3-201ENST00000323959 MID1IP1Q9NPA3 183 aa6.05□□□□□ -1.44
CSTF3-201ENST00000323959 OPTCQ9UBM4 332 aa6.05□□□□□ -1.44
CSTF3-201ENST00000323959 CDC14AQ9UNH5 594 aa6.05□□□□□ -1.44
CSTF3-201ENST00000323959 NDUFAF1Q9Y375 327 aa6.05□□□□□ -1.44
CSTF3-201ENST00000323959 FOXE1O00358 373 aaPredicted RBP6.05□□□□□ -1.44
CSTF3-201ENST00000323959 ANKRD28O15084 1053 aa6.05□□□□□ -1.44
CSTF3-201ENST00000323959 LSM1O15116 133 aaKnown RBP6.05□□□□□ -1.44
CSTF3-201ENST00000323959 FRS3O43559 492 aa6.05□□□□□ -1.44
CSTF3-201ENST00000323959 C1orf105O95561 183 aa6.05□□□□□ -1.44
CSTF3-201ENST00000323959 CATP04040 527 aaKnown RBP6.05□□□□□ -1.44
CSTF3-201ENST00000323959 KRT16P08779 473 aa6.05□□□□□ -1.44
CSTF3-201ENST00000323959 EPB42P16452 691 aa6.05□□□□□ -1.44
CSTF3-201ENST00000323959 MAGEA8P43361 318 aa6.05□□□□□ -1.44
CSTF3-201ENST00000323959 LRRC74AQ0VAA2 488 aa6.05□□□□□ -1.44
CSTF3-201ENST00000323959 CYLC2Q14093 348 aaPredicted RBP6.05□□□□□ -1.44
CSTF3-201ENST00000323959 RCAN2Q14206 197 aa6.05□□□□□ -1.44
CSTF3-201ENST00000323959 DEFB110Q30KQ9 67 aa6.05□□□□□ -1.44
CSTF3-201ENST00000323959 GRHL2Q6ISB3 625 aa6.05□□□□□ -1.44
CSTF3-201ENST00000323959 LCTLQ6UWM7 567 aa6.05□□□□□ -1.44
CSTF3-201ENST00000323959 UBE2R2Q712K3 238 aaPredicted RBP6.05□□□□□ -1.44
CSTF3-201ENST00000323959 C1QL4Q86Z23 238 aa6.05□□□□□ -1.44
CSTF3-201ENST00000323959 ZNF547Q8IVP9 402 aa6.05□□□□□ -1.44
CSTF3-201ENST00000323959 LAS2Q8IYD9 372 aa6.05□□□□□ -1.44
CSTF3-201ENST00000323959 ARMC10Q8N2F6 343 aa6.05□□□□□ -1.44
CSTF3-201ENST00000323959 SPATA6LQ8N4H0 392 aa6.05□□□□□ -1.44
CSTF3-201ENST00000323959 UBE2FQ969M7 185 aa6.05□□□□□ -1.44
CSTF3-201ENST00000323959 THOC1Q96FV9 657 aaKnown RBP6.05□□□□□ -1.44
CSTF3-201ENST00000323959 WFIKKN1Q96NZ8 548 aa6.05□□□□□ -1.44
CSTF3-201ENST00000323959 HOPXQ9BPY8 73 aaPredicted RBP6.05□□□□□ -1.44
CSTF3-201ENST00000323959 PELI2Q9HAT8 420 aa6.05□□□□□ -1.44
CSTF3-201ENST00000323959 POLG2Q9UHN1 485 aa6.05□□□□□ -1.44
CSTF3-201ENST00000323959 LAMP3Q9UQV4 416 aa6.05□□□□□ -1.44
CSTF3-201ENST00000323959 A0A088AWK7 358 aa6.04□□□□□ -1.44
CSTF3-201ENST00000323959 RGS14O43566 566 aa6.04□□□□□ -1.44
CSTF3-201ENST00000323959 TBX19O60806 448 aa6.04□□□□□ -1.44
CSTF3-201ENST00000323959 FKBP6O75344 327 aa6.04□□□□□ -1.44
CSTF3-201ENST00000323959 EEDO75530 441 aaKnown RBP6.04□□□□□ -1.44
CSTF3-201ENST00000323959 SMNDC1O75940 238 aaKnown RBP eCLIP6.04□□□□□ -1.44
CSTF3-201ENST00000323959 CLDN9O95484 217 aa6.04□□□□□ -1.44
CSTF3-201ENST00000323959 RPSAP08865 295 aaKnown RBP6.04□□□□□ -1.44
CSTF3-201ENST00000323959 HIST1H2AGP0C0S8 130 aaPredicted RBP6.04□□□□□ -1.44
CSTF3-201ENST00000323959 HIST1H2ADP20671 130 aa6.04□□□□□ -1.44
CSTF3-201ENST00000323959 CLCN2P51788 898 aa6.04□□□□□ -1.44
CSTF3-201ENST00000323959 NUDT6P53370 316 aa6.04□□□□□ -1.44
CSTF3-201ENST00000323959 KIAA0040Q15053 153 aa6.04□□□□□ -1.44
CSTF3-201ENST00000323959 PHKG1Q16816 387 aa6.04□□□□□ -1.44
CSTF3-201ENST00000323959 BLOC1S3Q6QNY0 202 aa6.04□□□□□ -1.44
CSTF3-201ENST00000323959 UGT2A3Q6UWM9 527 aa6.04□□□□□ -1.44
CSTF3-201ENST00000323959 CPEB2Q7Z5Q1 589 aaKnown RBP6.04□□□□□ -1.44
CSTF3-201ENST00000323959 CLDN19Q8N6F1 224 aa6.04□□□□□ -1.44
CSTF3-201ENST00000323959 RBM15BQ8NDT2 890 aaKnown RBP6.04□□□□□ -1.44
CSTF3-201ENST00000323959 FAM13CQ8NE31 585 aa6.04□□□□□ -1.44
CSTF3-201ENST00000323959 C10orf105Q8TEF2 133 aa6.04□□□□□ -1.44
CSTF3-201ENST00000323959 LCN9Q8WX39 176 aa6.04□□□□□ -1.44
CSTF3-201ENST00000323959 ELMO1Q92556 727 aa6.04□□□□□ -1.44
CSTF3-201ENST00000323959 GTF3AQ92664 365 aaKnown RBP6.04□□□□□ -1.44
CSTF3-201ENST00000323959 PHF21BQ96EK2 531 aa6.04□□□□□ -1.44
CSTF3-201ENST00000323959 CMTM7Q96FZ5 175 aa6.04□□□□□ -1.44
CSTF3-201ENST00000323959 HIST1H2AHQ96KK5 128 aa6.04□□□□□ -1.44
CSTF3-201ENST00000323959 FOPNLQ96NB1 174 aa6.04□□□□□ -1.44
CSTF3-201ENST00000323959 HIST1H2AJQ99878 128 aa6.04□□□□□ -1.44
CSTF3-201ENST00000323959 H2AFJQ9BTM1 129 aa6.04□□□□□ -1.44
CSTF3-201ENST00000323959 NUF2Q9BZD4 464 aa6.04□□□□□ -1.44
CSTF3-201ENST00000323959 AKTIPQ9H8T0 292 aa6.04□□□□□ -1.44
CSTF3-201ENST00000323959 EFCAB1Q9HAE3 211 aa6.04□□□□□ -1.44
CSTF3-201ENST00000323959 IL1RL2Q9HB29 575 aa6.04□□□□□ -1.44
CSTF3-201ENST00000323959 MKKSQ9NPJ1 570 aaPredicted RBP6.04□□□□□ -1.44
CSTF3-201ENST00000323959 DNAJC11Q9NVH1 559 aa6.04□□□□□ -1.44
CSTF3-201ENST00000323959 SPHK1Q9NYA1 384 aa6.04□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 72.7 ms