RNA–Protein interactions for RNA: ENST00000318266.9

PTPRA-202, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPRA, Length 3,219 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-202ENST00000318266 FCRL4Q96PJ5 515 aa9.1□□□□□ -0.95
PTPRA-202ENST00000318266 C2orf49Q9BVC5 232 aaPredicted RBP9.1□□□□□ -0.95
PTPRA-202ENST00000318266 SLC7A5P2Q9GIP4 190 aa9.1□□□□□ -0.95
PTPRA-202ENST00000318266 SERHL2Q9H4I8 314 aa9.1□□□□□ -0.95
PTPRA-202ENST00000318266 METTL17Q9H7H0 456 aaPredicted RBP9.1□□□□□ -0.95
PTPRA-202ENST00000318266 ERVMER34-1Q9H9K5 563 aa9.1□□□□□ -0.95
PTPRA-202ENST00000318266 B4GALT6Q9UBX8 382 aa9.1□□□□□ -0.95
PTPRA-202ENST00000318266 NDOR1Q9UHB4 597 aa9.1□□□□□ -0.95
PTPRA-202ENST00000318266 RASD1Q9Y272 281 aa9.1□□□□□ -0.95
PTPRA-202ENST00000318266 AP1M2Q9Y6Q5 423 aa9.1□□□□□ -0.95
PTPRA-202ENST00000318266 NUMA1Q14980 2115 aa9.09□□□□□ -0.95
PTPRA-202ENST00000318266 A0A0G2JN53 185 aa9.09□□□□□ -0.95
PTPRA-202ENST00000318266 TMEM129A0AVI4 362 aa9.09□□□□□ -0.95
PTPRA-202ENST00000318266 ZC3H12DA2A288 527 aaKnown RBP9.09□□□□□ -0.95
PTPRA-202ENST00000318266 OR6C75A6NL08 312 aa9.09□□□□□ -0.95
PTPRA-202ENST00000318266 HNRNPCL2B2RXH8 293 aa9.09□□□□□ -0.95
PTPRA-202ENST00000318266 M0R233 179 aa9.09□□□□□ -0.95
PTPRA-202ENST00000318266 LGALS8O00214 317 aa9.09□□□□□ -0.95
PTPRA-202ENST00000318266 SHC1P29353 583 aa9.09□□□□□ -0.95
PTPRA-202ENST00000318266 FGF9P31371 208 aaPredicted RBP9.09□□□□□ -0.95
PTPRA-202ENST00000318266 OR1D2P34982 312 aa9.09□□□□□ -0.95
PTPRA-202ENST00000318266 CTSCP53634 463 aa9.09□□□□□ -0.95
PTPRA-202ENST00000318266 TBPL1P62380 186 aa9.09□□□□□ -0.95
PTPRA-202ENST00000318266 PUDPQ08623 228 aa9.09□□□□□ -0.95
PTPRA-202ENST00000318266 RAB40BQ12829 278 aa9.09□□□□□ -0.95
PTPRA-202ENST00000318266 COL28A1Q2UY09 1125 aa9.09□□□□□ -0.95
PTPRA-202ENST00000318266 SLC36A4Q6YBV0 504 aa9.09□□□□□ -0.95
PTPRA-202ENST00000318266 Q6ZVL8 140 aa9.09□□□□□ -0.95
PTPRA-202ENST00000318266 OR6T1Q8NGN1 323 aa9.09□□□□□ -0.95
PTPRA-202ENST00000318266 LHFPL5Q8TAF8 219 aa9.09□□□□□ -0.95
PTPRA-202ENST00000318266 HMGB4Q8WW32 186 aa9.09□□□□□ -0.95
PTPRA-202ENST00000318266 GIMAP1Q8WWP7 306 aa9.09□□□□□ -0.95
PTPRA-202ENST00000318266 PDXPQ96GD0 296 aa9.09□□□□□ -0.95
PTPRA-202ENST00000318266 TOE1Q96GM8 510 aaKnown RBP9.09□□□□□ -0.95
PTPRA-202ENST00000318266 COQ10AQ96MF6 247 aa9.09□□□□□ -0.95
PTPRA-202ENST00000318266 NRTNQ99748 197 aa9.09□□□□□ -0.95
PTPRA-202ENST00000318266 TREX2Q9BQ50 279 aaPredicted RBP9.09□□□□□ -0.95
PTPRA-202ENST00000318266 CACNG6Q9BXT2 260 aa9.09□□□□□ -0.95
PTPRA-202ENST00000318266 OR6C2Q9NZP2 312 aa9.09□□□□□ -0.95
PTPRA-202ENST00000318266 HCN3Q9P1Z3 774 aa9.09□□□□□ -0.95
PTPRA-202ENST00000318266 A4GNTQ9UNA3 340 aa9.09□□□□□ -0.95
PTPRA-202ENST00000318266 TMEM5Q9Y2B1 443 aa9.09□□□□□ -0.95
PTPRA-202ENST00000318266 OR51B4Q9Y5P0 310 aa9.09□□□□□ -0.95
PTPRA-202ENST00000318266 CSNK1G3Q9Y6M4 447 aa9.09□□□□□ -0.95
PTPRA-202ENST00000318266 HELZP42694 1942 aaKnown RBP9.09□□□□□ -0.95
PTPRA-202ENST00000318266 SYNDIG1LA6NDD5 238 aa9.09□□□□□ -0.95
PTPRA-202ENST00000318266 UGDHO60701 494 aa9.09□□□□□ -0.95
PTPRA-202ENST00000318266 GATBO75879 557 aaKnown RBP9.09□□□□□ -0.95
PTPRA-202ENST00000318266 SLC2A10O95528 541 aa9.09□□□□□ -0.95
PTPRA-202ENST00000318266 IGSF6O95976 241 aa9.09□□□□□ -0.95
PTPRA-202ENST00000318266 HOXD4P09016 255 aaPredicted RBP9.09□□□□□ -0.95
PTPRA-202ENST00000318266 MPC1LP0DKB6 136 aa9.09□□□□□ -0.95
PTPRA-202ENST00000318266 HK1P19367 917 aa9.09□□□□□ -0.95
PTPRA-202ENST00000318266 VIPR1P32241 457 aa9.09□□□□□ -0.95
PTPRA-202ENST00000318266 SP140Q13342 867 aa9.09□□□□□ -0.95
PTPRA-202ENST00000318266 STK11Q15831 433 aa9.09□□□□□ -0.95
PTPRA-202ENST00000318266 ST3GAL2Q16842 350 aa9.09□□□□□ -0.95
PTPRA-202ENST00000318266 TUSC1Q2TAM9 212 aa9.09□□□□□ -0.95
PTPRA-202ENST00000318266 METAP1DQ6UB28 335 aaPredicted RBP9.09□□□□□ -0.95
PTPRA-202ENST00000318266 WASH2PQ6VEQ5 465 aa9.09□□□□□ -0.95
PTPRA-202ENST00000318266 SLCO4C1Q6ZQN7 724 aa9.09□□□□□ -0.95
PTPRA-202ENST00000318266 FAM92BQ6ZTR7 304 aa9.09□□□□□ -0.95
PTPRA-202ENST00000318266 SYT9Q86SS6 491 aa9.09□□□□□ -0.95
PTPRA-202ENST00000318266 IZUMO1Q8IYV9 350 aa9.09□□□□□ -0.95
PTPRA-202ENST00000318266 ZNF687Q8N1G0 1237 aa9.09□□□□□ -0.95
PTPRA-202ENST00000318266 OR8K5Q8NH50 307 aa9.09□□□□□ -0.95
PTPRA-202ENST00000318266 ST8SIA2Q92186 375 aa9.09□□□□□ -0.95
PTPRA-202ENST00000318266 MARVELD3Q96A59 401 aa9.09□□□□□ -0.95
PTPRA-202ENST00000318266 NXPE2Q96DL1 559 aa9.09□□□□□ -0.95
PTPRA-202ENST00000318266 SCMH1Q96GD3 660 aa9.09□□□□□ -0.95
PTPRA-202ENST00000318266 DPAGT1Q9H3H5 408 aa9.09□□□□□ -0.95
PTPRA-202ENST00000318266 OSGEPL1Q9H4B0 414 aa9.09□□□□□ -0.95
PTPRA-202ENST00000318266 NT5DC2Q9H857 520 aa9.09□□□□□ -0.95
PTPRA-202ENST00000318266 PLXNA3P51805 1871 aa9.09□□□□□ -0.95
PTPRA-202ENST00000318266 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP9.09□□□□□ -0.96
PTPRA-202ENST00000318266 AGAP14A8MT82 685 aa9.09□□□□□ -0.96
PTPRA-202ENST00000318266 GPR171O14626 319 aa9.09□□□□□ -0.96
PTPRA-202ENST00000318266 SYN3O14994 580 aa9.09□□□□□ -0.96
PTPRA-202ENST00000318266 B4GALT2O60909 372 aa9.09□□□□□ -0.96
PTPRA-202ENST00000318266 CATP04040 527 aaKnown RBP9.09□□□□□ -0.96
PTPRA-202ENST00000318266 ACSM4P0C7M7 580 aa9.09□□□□□ -0.96
PTPRA-202ENST00000318266 RRASP10301 218 aa9.09□□□□□ -0.96
PTPRA-202ENST00000318266 NR2F1P10589 423 aa9.09□□□□□ -0.96
PTPRA-202ENST00000318266 IL32P24001 234 aa9.09□□□□□ -0.96
PTPRA-202ENST00000318266 HSD3B2P26439 372 aa9.09□□□□□ -0.96
PTPRA-202ENST00000318266 CD70P32970 193 aa9.09□□□□□ -0.96
PTPRA-202ENST00000318266 CNTN1Q12860 1018 aa9.09□□□□□ -0.96
PTPRA-202ENST00000318266 ELOAQ14241 798 aaKnown RBP9.09□□□□□ -0.96
PTPRA-202ENST00000318266 GPR68Q15743 365 aa9.09□□□□□ -0.96
PTPRA-202ENST00000318266 PLEKHS1Q5SXH7 462 aa9.09□□□□□ -0.96
PTPRA-202ENST00000318266 FAM71E1Q6IPT2 247 aa9.09□□□□□ -0.96
PTPRA-202ENST00000318266 SLC27A4Q6P1M0 643 aa9.09□□□□□ -0.96
PTPRA-202ENST00000318266 ARL9Q6T311 187 aa9.09□□□□□ -0.96
PTPRA-202ENST00000318266 C6orf120Q7Z4R8 191 aa9.09□□□□□ -0.96
PTPRA-202ENST00000318266 C11orf96Q7Z7L8 435 aa9.09□□□□□ -0.96
PTPRA-202ENST00000318266 LRRTM4Q86VH4 590 aa9.09□□□□□ -0.96
PTPRA-202ENST00000318266 SIAH3Q8IW03 269 aa9.09□□□□□ -0.96
PTPRA-202ENST00000318266 TOMM5Q8N4H5 51 aa9.09□□□□□ -0.96
PTPRA-202ENST00000318266 ARIH2OSQ8N7S6 290 aa9.09□□□□□ -0.96
PTPRA-202ENST00000318266 DCAF4L2Q8NA75 395 aa9.09□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms