RNA–Protein interactions for RNA: ENST00000317610.11

RTN4-201, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 2,333 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-201ENST00000317610 RFKQ969G6 155 aa17.95■□□□□ 0.46
RTN4-201ENST00000317610 BTBD1Q9H0C5 482 aa17.95■□□□□ 0.46
RTN4-201ENST00000317610 MCUBQ9NWR8 336 aa17.95■□□□□ 0.46
RTN4-201ENST00000317610 A0A0A6YYD5 115 aa17.94■□□□□ 0.46
RTN4-201ENST00000317610 CARNS1A5YM72 827 aa17.94■□□□□ 0.46
RTN4-201ENST00000317610 SYT5O00445 386 aa17.94■□□□□ 0.46
RTN4-201ENST00000317610 DRD2P14416 443 aa17.94■□□□□ 0.46
RTN4-201ENST00000317610 BUD31P41223 144 aaPredicted RBP17.94■□□□□ 0.46
RTN4-201ENST00000317610 RAB25P57735 213 aa17.94■□□□□ 0.46
RTN4-201ENST00000317610 DPTQ07507 201 aa17.94■□□□□ 0.46
RTN4-201ENST00000317610 GNA13Q14344 377 aa17.94■□□□□ 0.46
RTN4-201ENST00000317610 UAP1L1Q3KQV9 507 aa17.94■□□□□ 0.46
RTN4-201ENST00000317610 EOGTQ5NDL2 527 aa17.94■□□□□ 0.46
RTN4-201ENST00000317610 PRAMEF8Q5VWM4 474 aa17.94■□□□□ 0.46
RTN4-201ENST00000317610 PRAMEF7Q5VXH5 474 aa17.94■□□□□ 0.46
RTN4-201ENST00000317610 SZRD1Q7Z422 152 aa17.94■□□□□ 0.46
RTN4-201ENST00000317610 KLHL36Q8N4N3 616 aa17.94■□□□□ 0.46
RTN4-201ENST00000317610 AMER3Q8N944 861 aa17.94■□□□□ 0.46
RTN4-201ENST00000317610 SMG7Q92540 1137 aaKnown RBP17.94■□□□□ 0.46
RTN4-201ENST00000317610 CREB3L1Q96BA8 519 aa17.94■□□□□ 0.46
RTN4-201ENST00000317610 TMED9Q9BVK6 235 aa17.94■□□□□ 0.46
RTN4-201ENST00000317610 JAM3Q9BX67 310 aa17.94■□□□□ 0.46
RTN4-201ENST00000317610 HDHD5Q9BXW7 423 aa17.94■□□□□ 0.46
RTN4-201ENST00000317610 CTPS2Q9NRF8 586 aa17.94■□□□□ 0.46
RTN4-201ENST00000317610 MARK1Q9P0L2 795 aa17.94■□□□□ 0.46
RTN4-201ENST00000317610 TCF20Q9UGU0 1960 aaKnown RBP17.94■□□□□ 0.46
RTN4-201ENST00000317610 FEZF1A0PJY2 475 aa17.94■□□□□ 0.46
RTN4-201ENST00000317610 KPNA3O00505 521 aaPredicted RBP17.94■□□□□ 0.46
RTN4-201ENST00000317610 VEGFDO43915 354 aa17.94■□□□□ 0.46
RTN4-201ENST00000317610 OR2B3O76000 313 aa17.94■□□□□ 0.46
RTN4-201ENST00000317610 ACP5P13686 325 aa17.94■□□□□ 0.46
RTN4-201ENST00000317610 OMPP47874 163 aa17.94■□□□□ 0.46
RTN4-201ENST00000317610 RPA4Q13156 261 aa17.94■□□□□ 0.46
RTN4-201ENST00000317610 ZNF366Q8N895 744 aa17.94■□□□□ 0.46
RTN4-201ENST00000317610 OR4F15Q8NGB8 312 aa17.94■□□□□ 0.46
RTN4-201ENST00000317610 SFXN5Q8TD22 340 aa17.94■□□□□ 0.46
RTN4-201ENST00000317610 ARHGDIGQ99819 225 aa17.94■□□□□ 0.46
RTN4-201ENST00000317610 SLC35C2Q9NQQ7 365 aa17.94■□□□□ 0.46
RTN4-201ENST00000317610 PCYT1BQ9Y5K3 369 aaPredicted RBP17.94■□□□□ 0.46
RTN4-201ENST00000317610 LOC102723532A0A0G2JNH3 316 aa17.93■□□□□ 0.46
RTN4-201ENST00000317610 WASHC1A8K0Z3 465 aa17.93■□□□□ 0.46
RTN4-201ENST00000317610 AGRPO00253 132 aa17.93■□□□□ 0.46
RTN4-201ENST00000317610 AKR7A2O43488 359 aa17.93■□□□□ 0.46
RTN4-201ENST00000317610 ANXA11P50995 505 aaKnown RBP17.93■□□□□ 0.46
RTN4-201ENST00000317610 METAP1P53582 386 aa17.93■□□□□ 0.46
RTN4-201ENST00000317610 BTG1P62324 171 aa17.93■□□□□ 0.46
RTN4-201ENST00000317610 MAP4K2Q12851 820 aa17.93■□□□□ 0.46
RTN4-201ENST00000317610 ADAM15Q13444 863 aa17.93■□□□□ 0.46
RTN4-201ENST00000317610 TRAM2Q15035 370 aa17.93■□□□□ 0.46
RTN4-201ENST00000317610 TMCO2Q7Z6W1 182 aaPredicted RBP17.93■□□□□ 0.46
RTN4-201ENST00000317610 HMGN2P46Q86SG4 172 aa17.93■□□□□ 0.46
RTN4-201ENST00000317610 GJD3Q8N144 294 aa17.93■□□□□ 0.46
RTN4-201ENST00000317610 OR4Q3Q8NH05 313 aa17.93■□□□□ 0.46
RTN4-201ENST00000317610 ACOT12Q8WYK0 555 aa17.93■□□□□ 0.46
RTN4-201ENST00000317610 DIO2Q92813 273 aa17.93■□□□□ 0.46
RTN4-201ENST00000317610 NRTNQ99748 197 aa17.93■□□□□ 0.46
RTN4-201ENST00000317610 DPH7Q9BTV6 452 aa17.93■□□□□ 0.46
RTN4-201ENST00000317610 PCBD2Q9H0N5 130 aa17.93■□□□□ 0.46
RTN4-201ENST00000317610 ZBP1Q9H171 429 aa17.93■□□□□ 0.46
RTN4-201ENST00000317610 ANKRD19PQ9H560 264 aa17.93■□□□□ 0.46
RTN4-201ENST00000317610 TBC1D17Q9HA65 648 aa17.93■□□□□ 0.46
RTN4-201ENST00000317610 TDP1Q9NUW8 608 aa17.93■□□□□ 0.46
RTN4-201ENST00000317610 MED17Q9NVC6 651 aa17.93■□□□□ 0.46
RTN4-201ENST00000317610 HCFC1R1Q9NWW0 138 aa17.93■□□□□ 0.46
RTN4-201ENST00000317610 ISM1B1AKI9 464 aa17.93■□□□□ 0.46
RTN4-201ENST00000317610 INMT-MINDY4F8WBC2 141 aa17.93■□□□□ 0.46
RTN4-201ENST00000317610 SURF4O15260 269 aa17.93■□□□□ 0.46
RTN4-201ENST00000317610 HK1P19367 917 aa17.93■□□□□ 0.46
RTN4-201ENST00000317610 CELP19835 753 aa17.93■□□□□ 0.46
RTN4-201ENST00000317610 HSD17B2P37059 387 aa17.93■□□□□ 0.46
RTN4-201ENST00000317610 CTBP2P56545 445 aa17.93■□□□□ 0.46
RTN4-201ENST00000317610 TAS2R41P59536 307 aa17.93■□□□□ 0.46
RTN4-201ENST00000317610 OR4C11Q6IEV9 310 aa17.93■□□□□ 0.46
RTN4-201ENST00000317610 TMEM91Q6ZNR0 172 aa17.93■□□□□ 0.46
RTN4-201ENST00000317610 AKAP1Q92667 903 aaKnown RBP eCLIP17.93■□□□□ 0.46
RTN4-201ENST00000317610 TFGQ92734 400 aaPredicted RBP17.93■□□□□ 0.46
RTN4-201ENST00000317610 TCEAL4Q96EI5 215 aa17.93■□□□□ 0.46
RTN4-201ENST00000317610 MENTQ9BUN1 341 aa17.93■□□□□ 0.46
RTN4-201ENST00000317610 PAK6Q9NQU5 681 aaPredicted RBP17.93■□□□□ 0.46
RTN4-201ENST00000317610 DIABLOQ9NR28 239 aa17.93■□□□□ 0.46
RTN4-201ENST00000317610 TMEM39AQ9NV64 488 aa17.93■□□□□ 0.46
RTN4-201ENST00000317610 CBLCQ9ULV8 474 aa17.93■□□□□ 0.46
RTN4-201ENST00000317610 A0A1W2PPV9 198 aa17.92■□□□□ 0.46
RTN4-201ENST00000317610 H7BY64 318 aa17.92■□□□□ 0.46
RTN4-201ENST00000317610 KIAA0355O15063 1070 aa17.92■□□□□ 0.46
RTN4-201ENST00000317610 PLOD3O60568 738 aa17.92■□□□□ 0.46
RTN4-201ENST00000317610 EFCAB14O75071 495 aa17.92■□□□□ 0.46
RTN4-201ENST00000317610 C6P13671 934 aa17.92■□□□□ 0.46
RTN4-201ENST00000317610 DDX6P26196 483 aaKnown RBP eCLIP17.92■□□□□ 0.464e-30■□□□□ 10.7
RTN4-201ENST00000317610 OR3A3P47888 321 aa17.92■□□□□ 0.46
RTN4-201ENST00000317610 NCBP2P52298 156 aaKnown RBP eCLIP17.92■□□□□ 0.46
RTN4-201ENST00000317610 AGFG1P52594 562 aaKnown RBP17.92■□□□□ 0.46
RTN4-201ENST00000317610 TAS2R38P59533 333 aa17.92■□□□□ 0.46
RTN4-201ENST00000317610 FZD5Q13467 585 aa17.92■□□□□ 0.46
RTN4-201ENST00000317610 ZNF77Q15935 545 aa17.92■□□□□ 0.46
RTN4-201ENST00000317610 NDUFAF5Q5TEU4 345 aa17.92■□□□□ 0.46
RTN4-201ENST00000317610 CNKSR3Q6P9H4 555 aa17.92■□□□□ 0.46
RTN4-201ENST00000317610 OR5K2Q8NHB8 316 aa17.92■□□□□ 0.46
RTN4-201ENST00000317610 CD99L2Q8TCZ2 262 aa17.92■□□□□ 0.46
RTN4-201ENST00000317610 SPRYD4Q8WW59 207 aaPredicted RBP17.92■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms