RNA–Protein interactions for RNA: ENST00000302528.11

CLIP1-201, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

APPRIS P4 TSL 5 BASIC

Gene CLIP1, Length 5,833 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-201ENST00000302528 ZNF169Q14929 603 aaPredicted RBP9.89□□□□□ -0.83
CLIP1-201ENST00000302528 TMEM41BQ5BJD5 291 aa9.89□□□□□ -0.83
CLIP1-201ENST00000302528 PLEKHS1Q5SXH7 462 aa9.89□□□□□ -0.83
CLIP1-201ENST00000302528 TMEM173Q86WV6 379 aaPredicted RBP9.89□□□□□ -0.83
CLIP1-201ENST00000302528 IRF2BP1Q8IU81 584 aa9.89□□□□□ -0.83
CLIP1-201ENST00000302528 LRRC57Q8N9N7 239 aa9.89□□□□□ -0.83
CLIP1-201ENST00000302528 ZUFSPQ96AP4 578 aa9.89□□□□□ -0.83
CLIP1-201ENST00000302528 PTERQ96BW5 349 aa9.89□□□□□ -0.83
CLIP1-201ENST00000302528 KLRG1Q96E93 195 aa9.89□□□□□ -0.83
CLIP1-201ENST00000302528 TRMT2BQ96GJ1 504 aaKnown RBP9.89□□□□□ -0.83
CLIP1-201ENST00000302528 MKS1Q9NXB0 559 aa9.89□□□□□ -0.83
CLIP1-201ENST00000302528 NLKQ9UBE8 527 aa9.89□□□□□ -0.83
CLIP1-201ENST00000302528 RHBDD3Q9Y3P4 386 aa9.89□□□□□ -0.83
CLIP1-201ENST00000302528 C1orf226A1L170 272 aa9.89□□□□□ -0.83
CLIP1-201ENST00000302528 ARVCFO00192 962 aa9.89□□□□□ -0.83
CLIP1-201ENST00000302528 DNAJB6O75190 326 aa9.89□□□□□ -0.83
CLIP1-201ENST00000302528 MPIG6BO95866 241 aa9.89□□□□□ -0.83
CLIP1-201ENST00000302528 EIF4EP06730 217 aaKnown RBP9.89□□□□□ -0.83
CLIP1-201ENST00000302528 GAAP10253 952 aa9.89□□□□□ -0.83
CLIP1-201ENST00000302528 MGST1P10620 155 aaKnown RBP9.89□□□□□ -0.83
CLIP1-201ENST00000302528 JAM2P57087 298 aa9.89□□□□□ -0.83
CLIP1-201ENST00000302528 TEAD2Q15562 447 aa9.89□□□□□ -0.83
CLIP1-201ENST00000302528 DPY19L2P1Q6NXN4 242 aa9.89□□□□□ -0.83
CLIP1-201ENST00000302528 KIAA0907Q7Z7F0 614 aaPredicted RBP9.89□□□□□ -0.83
CLIP1-201ENST00000302528 SNAPC3Q92966 411 aa9.89□□□□□ -0.83
CLIP1-201ENST00000302528 CCNL2Q96S94 520 aaPredicted RBP9.89□□□□□ -0.83
CLIP1-201ENST00000302528 ZNF559Q9BR84 538 aa9.89□□□□□ -0.83
CLIP1-201ENST00000302528 FGFBP2Q9BYJ0 223 aa9.89□□□□□ -0.83
CLIP1-201ENST00000302528 ACTR10Q9NZ32 417 aa9.89□□□□□ -0.83
CLIP1-201ENST00000302528 CXorf49A8MYA2 514 aaPredicted RBP9.89□□□□□ -0.83
CLIP1-201ENST00000302528 H0YAE9 185 aa9.89□□□□□ -0.83
CLIP1-201ENST00000302528 UBFD1O14562 309 aaKnown RBP9.89□□□□□ -0.83
CLIP1-201ENST00000302528 LCMT2O60294 686 aaKnown RBP9.89□□□□□ -0.83
CLIP1-201ENST00000302528 BEST1O76090 585 aa9.89□□□□□ -0.83
CLIP1-201ENST00000302528 PRSS3P35030 304 aa9.89□□□□□ -0.83
CLIP1-201ENST00000302528 KCNQ1P51787 676 aa9.89□□□□□ -0.83
CLIP1-201ENST00000302528 STC1P52823 247 aa9.89□□□□□ -0.83
CLIP1-201ENST00000302528 SLC10A6Q3KNW5 377 aa9.89□□□□□ -0.83
CLIP1-201ENST00000302528 LCN10Q6JVE6 187 aa9.89□□□□□ -0.83
CLIP1-201ENST00000302528 KIAA1211LQ6NV74 962 aa9.89□□□□□ -0.83
CLIP1-201ENST00000302528 ZNF767PQ75MW2 155 aa9.89□□□□□ -0.83
CLIP1-201ENST00000302528 ZDHHC14Q8IZN3 488 aa9.89□□□□□ -0.83
CLIP1-201ENST00000302528 NAT8LQ8N9F0 302 aa9.89□□□□□ -0.83
CLIP1-201ENST00000302528 FNDC9Q8TBE3 224 aa9.89□□□□□ -0.83
CLIP1-201ENST00000302528 TBC1D20Q96BZ9 403 aa9.89□□□□□ -0.83
CLIP1-201ENST00000302528 TEPSINQ96N21 525 aa9.89□□□□□ -0.83
CLIP1-201ENST00000302528 TTYH3Q9C0H2 523 aa9.89□□□□□ -0.83
CLIP1-201ENST00000302528 PPA2Q9H2U2 334 aa9.89□□□□□ -0.83
CLIP1-201ENST00000302528 CUTCQ9NTM9 273 aa9.89□□□□□ -0.83
CLIP1-201ENST00000302528 TESQ9UGI8 421 aaKnown RBP9.89□□□□□ -0.83
CLIP1-201ENST00000302528 HS3ST4Q9Y661 456 aa9.89□□□□□ -0.83
CLIP1-201ENST00000302528 TCRBV21S2A2A0A5A6 115 aa9.89□□□□□ -0.83
CLIP1-201ENST00000302528 ANKRD30BLA7E2S9 258 aa9.89□□□□□ -0.83
CLIP1-201ENST00000302528 TXNL1O43396 289 aa9.89□□□□□ -0.83
CLIP1-201ENST00000302528 KDELR3O43731 214 aa9.89□□□□□ -0.83
CLIP1-201ENST00000302528 AK1P00568 194 aa9.89□□□□□ -0.83
CLIP1-201ENST00000302528 FUT2Q10981 343 aa9.89□□□□□ -0.83
CLIP1-201ENST00000302528 APOFQ13790 326 aa9.89□□□□□ -0.83
CLIP1-201ENST00000302528 SF3B4Q15427 424 aaKnown RBP eCLIP9.89□□□□□ -0.83
CLIP1-201ENST00000302528 SOWAHAQ2M3V2 549 aa9.89□□□□□ -0.83
CLIP1-201ENST00000302528 C6orf141Q5SZD1 244 aa9.89□□□□□ -0.83
CLIP1-201ENST00000302528 C10orf62Q5T681 223 aaPredicted RBP9.89□□□□□ -0.83
CLIP1-201ENST00000302528 STEAP4Q687X5 459 aa9.89□□□□□ -0.83
CLIP1-201ENST00000302528 FIGNL1Q6PIW4 674 aa9.89□□□□□ -0.83
CLIP1-201ENST00000302528 RPS27LQ71UM5 84 aaKnown RBP9.89□□□□□ -0.83
CLIP1-201ENST00000302528 CILP2Q8IUL8 1156 aa9.89□□□□□ -0.83
CLIP1-201ENST00000302528 ZNF679Q8IYX0 411 aa9.89□□□□□ -0.83
CLIP1-201ENST00000302528 SCML4Q8N228 414 aa9.89□□□□□ -0.83
CLIP1-201ENST00000302528 TEX26Q8N6G2 289 aa9.89□□□□□ -0.83
CLIP1-201ENST00000302528 OR9A2Q8NGT5 310 aa9.89□□□□□ -0.83
CLIP1-201ENST00000302528 OR4K13Q8NH42 304 aa9.89□□□□□ -0.83
CLIP1-201ENST00000302528 COQ10AQ96MF6 247 aa9.89□□□□□ -0.83
CLIP1-201ENST00000302528 FKRPQ9H9S5 495 aa9.89□□□□□ -0.83
CLIP1-201ENST00000302528 APOBEC3GQ9HC16 384 aaKnown RBP9.89□□□□□ -0.83
CLIP1-201ENST00000302528 GIMAP2Q9UG22 337 aa9.89□□□□□ -0.83
CLIP1-201ENST00000302528 FAM159BA6NKW6 160 aa9.88□□□□□ -0.83
CLIP1-201ENST00000302528 E9PI62 339 aa9.88□□□□□ -0.83
CLIP1-201ENST00000302528 PMM2O15305 246 aa9.88□□□□□ -0.83
CLIP1-201ENST00000302528 NUDT21O43809 227 aaKnown RBP9.88□□□□□ -0.83
CLIP1-201ENST00000302528 SEC14L2O76054 403 aa9.88□□□□□ -0.83
CLIP1-201ENST00000302528 DDCP20711 480 aa9.88□□□□□ -0.83
CLIP1-201ENST00000302528 FABP6P51161 128 aa9.88□□□□□ -0.83
CLIP1-201ENST00000302528 FGFBP1Q14512 234 aa9.88□□□□□ -0.83
CLIP1-201ENST00000302528 ATP6AP1Q15904 470 aa9.88□□□□□ -0.83
CLIP1-201ENST00000302528 SFT2D3Q587I9 215 aa9.88□□□□□ -0.83
CLIP1-201ENST00000302528 COQ5Q5HYK3 327 aa9.88□□□□□ -0.83
CLIP1-201ENST00000302528 ATG9BQ674R7 924 aa9.88□□□□□ -0.83
CLIP1-201ENST00000302528 SLC22A25Q6T423 547 aa9.88□□□□□ -0.83
CLIP1-201ENST00000302528 GRASPQ7Z6J2 395 aaPredicted RBP9.88□□□□□ -0.83
CLIP1-201ENST00000302528 BPHLQ86WA6 291 aaPredicted RBP9.88□□□□□ -0.83
CLIP1-201ENST00000302528 CSNK1A1LQ8N752 337 aa9.88□□□□□ -0.83
CLIP1-201ENST00000302528 DEDD2Q8WXF8 326 aa9.88□□□□□ -0.83
CLIP1-201ENST00000302528 PGAP3Q96FM1 320 aaPredicted RBP9.88□□□□□ -0.83
CLIP1-201ENST00000302528 FAM71F1Q96KD3 344 aaPredicted RBP9.88□□□□□ -0.83
CLIP1-201ENST00000302528 LRFN5Q96NI6 719 aa9.88□□□□□ -0.83
CLIP1-201ENST00000302528 SEZ6LQ9BYH1 1024 aa9.88□□□□□ -0.83
CLIP1-201ENST00000302528 B4GALT6Q9UBX8 382 aa9.88□□□□□ -0.83
CLIP1-201ENST00000302528 RARRES3Q9UL19 164 aa9.88□□□□□ -0.83
CLIP1-201ENST00000302528 SCML2Q9UQR0 700 aa9.88□□□□□ -0.83
CLIP1-201ENST00000302528 A0A096LPI6 279 aa9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms