RNA–Protein interactions for RNA: ENST00000054666.10

VAMP3-201, Transcript of vesicle associated membrane protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAMP3, Length 2,205 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP3-201ENST00000054666 OR2L13Q8N349 312 aa7.74□□□□□ -1.17
VAMP3-201ENST00000054666 CSNK1A1LQ8N752 337 aa7.74□□□□□ -1.17
VAMP3-201ENST00000054666 PIGXQ8TBF5 258 aa7.74□□□□□ -1.17
VAMP3-201ENST00000054666 RPL3LQ92901 407 aaKnown RBP7.74□□□□□ -1.17
VAMP3-201ENST00000054666 CDS1Q92903 461 aa7.74□□□□□ -1.17
VAMP3-201ENST00000054666 ABTB1Q969K4 478 aaPredicted RBP7.74□□□□□ -1.17
VAMP3-201ENST00000054666 VMP1Q96GC9 406 aa7.74□□□□□ -1.17
VAMP3-201ENST00000054666 TEX12Q9BXU0 123 aa7.74□□□□□ -1.17
VAMP3-201ENST00000054666 TWSG1Q9GZX9 223 aa7.74□□□□□ -1.17
VAMP3-201ENST00000054666 RACGAP1Q9H0H5 632 aa7.74□□□□□ -1.17
VAMP3-201ENST00000054666 TCEAL2Q9H3H9 227 aaPredicted RBP7.74□□□□□ -1.17
VAMP3-201ENST00000054666 KRCC1Q9NPI7 259 aaPredicted RBP7.74□□□□□ -1.17
VAMP3-201ENST00000054666 MAN2C1Q9NTJ4 1040 aa7.74□□□□□ -1.17
VAMP3-201ENST00000054666 TVP23BQ9NYZ1 205 aa7.74□□□□□ -1.17
VAMP3-201ENST00000054666 KCMF1Q9P0J7 381 aa7.74□□□□□ -1.17
VAMP3-201ENST00000054666 NTMQ9P121 344 aa7.74□□□□□ -1.17
VAMP3-201ENST00000054666 SLC6A14Q9UN76 642 aa7.74□□□□□ -1.17
VAMP3-201ENST00000054666 ZNF232Q9UNY5 417 aa7.74□□□□□ -1.17
VAMP3-201ENST00000054666 CLCA2Q9UQC9 943 aa7.74□□□□□ -1.17
VAMP3-201ENST00000054666 ERGIC3Q9Y282 383 aa7.74□□□□□ -1.17
VAMP3-201ENST00000054666 ZNF443Q9Y2A4 671 aaPredicted RBP7.74□□□□□ -1.17
VAMP3-201ENST00000054666 B3GNT3Q9Y2A9 372 aa7.74□□□□□ -1.17
VAMP3-201ENST00000054666 REV3LO60673 3130 aa7.74□□□□□ -1.17
VAMP3-201ENST00000054666 XIRP2A4UGR9 3374 aa7.74□□□□□ -1.17
VAMP3-201ENST00000054666 LOC105369274A0A096LPK9 316 aa7.74□□□□□ -1.17
VAMP3-201ENST00000054666 LOC102723532A0A0G2JNH3 316 aa7.74□□□□□ -1.17
VAMP3-201ENST00000054666 LOC100506127A0A0U1RQW1 187 aa7.74□□□□□ -1.17
VAMP3-201ENST00000054666 SPTY2D1-AS1A0A0U1RR47 76 aa7.74□□□□□ -1.17
VAMP3-201ENST00000054666 SNTNA6NMZ2 147 aa7.74□□□□□ -1.17
VAMP3-201ENST00000054666 J3QRK9 145 aa7.74□□□□□ -1.17
VAMP3-201ENST00000054666 CYP7B1O75881 506 aa7.74□□□□□ -1.17
VAMP3-201ENST00000054666 EPPINO95925 133 aa7.74□□□□□ -1.17
VAMP3-201ENST00000054666 IGLV3-19P01714 112 aa7.74□□□□□ -1.17
VAMP3-201ENST00000054666 NT5EP21589 574 aa7.74□□□□□ -1.17
VAMP3-201ENST00000054666 GADD45AP24522 165 aa7.74□□□□□ -1.17
VAMP3-201ENST00000054666 MLLT10P55197 1068 aa7.74□□□□□ -1.17
VAMP3-201ENST00000054666 SHC2P98077 582 aa7.74□□□□□ -1.17
VAMP3-201ENST00000054666 C1DQ13901 141 aaKnown RBP7.74□□□□□ -1.17
VAMP3-201ENST00000054666 ANKDD1AQ495B1 522 aa7.74□□□□□ -1.17
VAMP3-201ENST00000054666 ZNF542PQ5EBM4 170 aa7.74□□□□□ -1.17
VAMP3-201ENST00000054666 MFSD4BQ5TF39 518 aa7.74□□□□□ -1.17
VAMP3-201ENST00000054666 HEPHL1Q6MZM0 1159 aa7.74□□□□□ -1.17
VAMP3-201ENST00000054666 C1orf94Q6P1W5 598 aa7.74□□□□□ -1.17
VAMP3-201ENST00000054666 FRRS1Q6ZNA5 592 aa7.74□□□□□ -1.17
VAMP3-201ENST00000054666 Q6ZS52 159 aa7.74□□□□□ -1.17
VAMP3-201ENST00000054666 WDR53Q7Z5U6 358 aaPredicted RBP7.74□□□□□ -1.17
VAMP3-201ENST00000054666 OR4N5Q8IXE1 308 aa7.74□□□□□ -1.17
VAMP3-201ENST00000054666 OR4N4Q8N0Y3 316 aa7.74□□□□□ -1.17
VAMP3-201ENST00000054666 AMER2Q8N7J2 671 aa7.74□□□□□ -1.17
VAMP3-201ENST00000054666 TCEANCQ8N8B7 351 aa7.74□□□□□ -1.17
VAMP3-201ENST00000054666 SLC16A11Q8NCK7 471 aa7.74□□□□□ -1.17
VAMP3-201ENST00000054666 MORN4Q8NDC4 146 aa7.74□□□□□ -1.17
VAMP3-201ENST00000054666 GNPDA2Q8TDQ7 276 aa7.74□□□□□ -1.17
VAMP3-201ENST00000054666 SH3YL1Q96HL8 342 aaPredicted RBP7.74□□□□□ -1.17
VAMP3-201ENST00000054666 GPR174Q9BXC1 333 aa7.74□□□□□ -1.17
VAMP3-201ENST00000054666 POLDIP3Q9BY77 421 aaKnown RBP7.74□□□□□ -1.17
VAMP3-201ENST00000054666 ZBTB20Q9HC78 741 aaPredicted RBP7.74□□□□□ -1.17
VAMP3-201ENST00000054666 ADAP2Q9NPF8 381 aa7.74□□□□□ -1.17
VAMP3-201ENST00000054666 EVA1BQ9NVM1 165 aa7.74□□□□□ -1.17
VAMP3-201ENST00000054666 MTCH2Q9Y6C9 303 aa7.74□□□□□ -1.17
VAMP3-201ENST00000054666 SZT2Q5T011 3432 aa7.73□□□□□ -1.17
VAMP3-201ENST00000054666 OR5K3A6NET4 321 aa7.73□□□□□ -1.17
VAMP3-201ENST00000054666 B4DGG1 531 aa7.73□□□□□ -1.17
VAMP3-201ENST00000054666 MYL12BO14950 172 aa7.73□□□□□ -1.17
VAMP3-201ENST00000054666 FRS3O43559 492 aa7.73□□□□□ -1.17
VAMP3-201ENST00000054666 IGFBP1P08833 259 aaPredicted RBP7.73□□□□□ -1.17
VAMP3-201ENST00000054666 ALOX5P09917 674 aa7.73□□□□□ -1.17
VAMP3-201ENST00000054666 IGFBP4P22692 258 aa7.73□□□□□ -1.17
VAMP3-201ENST00000054666 UGT2B10P36537 528 aa7.73□□□□□ -1.17
VAMP3-201ENST00000054666 SLC15A1P46059 708 aa7.73□□□□□ -1.17
VAMP3-201ENST00000054666 PCYT1AP49585 367 aa7.73□□□□□ -1.17
VAMP3-201ENST00000054666 RGS6P49758 472 aa7.73□□□□□ -1.17
VAMP3-201ENST00000054666 VSX2P58304 361 aaPredicted RBP7.73□□□□□ -1.17
VAMP3-201ENST00000054666 SKP1P63208 163 aa7.73□□□□□ -1.17
VAMP3-201ENST00000054666 ID2Q02363 134 aa7.73□□□□□ -1.17
VAMP3-201ENST00000054666 ZNF91Q05481 1191 aa7.73□□□□□ -1.17
VAMP3-201ENST00000054666 EIF2B5Q13144 721 aaKnown RBP7.73□□□□□ -1.17
VAMP3-201ENST00000054666 RGS21Q2M5E4 152 aa7.73□□□□□ -1.17
VAMP3-201ENST00000054666 ARHGAP11BQ3KRB8 267 aa7.73□□□□□ -1.17
VAMP3-201ENST00000054666 PUS10Q3MIT2 529 aaKnown RBP7.73□□□□□ -1.17
VAMP3-201ENST00000054666 ZNF628Q5EBL2 1059 aa7.73□□□□□ -1.17
VAMP3-201ENST00000054666 ENTPD8Q5MY95 495 aa7.73□□□□□ -1.17
VAMP3-201ENST00000054666 ZER1Q7Z7L7 766 aa7.73□□□□□ -1.17
VAMP3-201ENST00000054666 RANBP3LQ86VV4 465 aaPredicted RBP7.73□□□□□ -1.17
VAMP3-201ENST00000054666 CYP4Z2PQ8N1L4 340 aa7.73□□□□□ -1.17
VAMP3-201ENST00000054666 IQCF1Q8N6M8 205 aa7.73□□□□□ -1.17
VAMP3-201ENST00000054666 COX18Q8N8Q8 333 aa7.73□□□□□ -1.17
VAMP3-201ENST00000054666 AVL9Q8NBF6 648 aa7.73□□□□□ -1.17
VAMP3-201ENST00000054666 TSTD1Q8NFU3 115 aa7.73□□□□□ -1.17
VAMP3-201ENST00000054666 MCFD2Q8NI22 146 aa7.73□□□□□ -1.17
VAMP3-201ENST00000054666 FAM174AQ8TBP5 190 aa7.73□□□□□ -1.17
VAMP3-201ENST00000054666 ZDHHC1Q8WTX9 485 aa7.73□□□□□ -1.17
VAMP3-201ENST00000054666 DIO2Q92813 273 aa7.73□□□□□ -1.17
VAMP3-201ENST00000054666 KLHDC7BQ96G42 594 aa7.73□□□□□ -1.17
VAMP3-201ENST00000054666 SLC35A4Q96G79 324 aa7.73□□□□□ -1.17
VAMP3-201ENST00000054666 TMEM80Q96HE8 168 aa7.73□□□□□ -1.17
VAMP3-201ENST00000054666 SLC38A2Q96QD8 506 aa7.73□□□□□ -1.17
VAMP3-201ENST00000054666 MND1Q9BWT6 205 aa7.73□□□□□ -1.17
VAMP3-201ENST00000054666 TSSK6Q9BXA6 273 aa7.73□□□□□ -1.17
VAMP3-201ENST00000054666 MTHFD2LQ9H903 347 aaPredicted RBP7.73□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms