RNA–Protein interactions for RNA: ENST00000639290.1

CCDC7-213, Transcript of coiled-coil domain containing 7, humanhuman

TSL 1 (best)

Gene CCDC7, Length 2,542 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-213ENST00000639290 C2CD4AQ8NCU7 369 aaPredicted RBP3.02□□□□□ -1.93
CCDC7-213ENST00000639290 HIPK4Q8NE63 616 aa3.02□□□□□ -1.93
CCDC7-213ENST00000639290 C7orf57Q8NEG2 295 aa3.02□□□□□ -1.93
CCDC7-213ENST00000639290 NFAM1Q8NET5 270 aaPredicted RBP3.02□□□□□ -1.93
CCDC7-213ENST00000639290 GIMAP7Q8NHV1 300 aa3.02□□□□□ -1.93
CCDC7-213ENST00000639290 RAB39BQ96DA2 213 aa3.02□□□□□ -1.93
CCDC7-213ENST00000639290 RMDN2Q96LZ7 410 aa3.02□□□□□ -1.93
CCDC7-213ENST00000639290 ZNF48Q96MX3 618 aaPredicted RBP3.02□□□□□ -1.93
CCDC7-213ENST00000639290 SNX18Q96RF0 628 aa3.02□□□□□ -1.93
CCDC7-213ENST00000639290 FOXB1Q99853 325 aa3.02□□□□□ -1.93
CCDC7-213ENST00000639290 OPN3Q9H1Y3 402 aaPredicted RBP3.02□□□□□ -1.93
CCDC7-213ENST00000639290 SMURF2Q9HAU4 748 aa3.02□□□□□ -1.93
CCDC7-213ENST00000639290 ZC3H7BQ9UGR2 993 aaKnown RBP3.02□□□□□ -1.93
CCDC7-213ENST00000639290 MED16Q9Y2X0 877 aa3.02□□□□□ -1.93
CCDC7-213ENST00000639290 LRRC3CA6NJW4 275 aa3.02□□□□□ -1.93
CCDC7-213ENST00000639290 PTGES3LE9PB15 166 aa3.02□□□□□ -1.93
CCDC7-213ENST00000639290 NRP2O60462 931 aa3.02□□□□□ -1.93
CCDC7-213ENST00000639290 CBX7O95931 251 aa3.02□□□□□ -1.93
CCDC7-213ENST00000639290 ERVK-10P10266 1014 aa3.02□□□□□ -1.93
CCDC7-213ENST00000639290 PRPH2P23942 346 aa3.02□□□□□ -1.93
CCDC7-213ENST00000639290 IL1R2P27930 398 aa3.02□□□□□ -1.93
CCDC7-213ENST00000639290 PSMC2P35998 433 aaKnown RBP3.02□□□□□ -1.93
CCDC7-213ENST00000639290 SLCO1A2P46721 670 aa3.02□□□□□ -1.93
CCDC7-213ENST00000639290 TMED10P49755 219 aaKnown RBP3.02□□□□□ -1.93
CCDC7-213ENST00000639290 RHAGQ02094 409 aa3.02□□□□□ -1.93
CCDC7-213ENST00000639290 RAB32Q13637 225 aa3.02□□□□□ -1.93
CCDC7-213ENST00000639290 TBCEQ15813 527 aaPredicted RBP3.02□□□□□ -1.93
CCDC7-213ENST00000639290 MAN2A1Q16706 1144 aa3.02□□□□□ -1.93
CCDC7-213ENST00000639290 ARMCX4Q5H9R4 360 aa3.02□□□□□ -1.93
CCDC7-213ENST00000639290 DCAF12L2Q5VW00 463 aa3.02□□□□□ -1.93
CCDC7-213ENST00000639290 SPOPLQ6IQ16 392 aa3.02□□□□□ -1.93
CCDC7-213ENST00000639290 Q6ZSR9 355 aa3.02□□□□□ -1.93
CCDC7-213ENST00000639290 LANCL3Q6ZV70 420 aa3.02□□□□□ -1.93
CCDC7-213ENST00000639290 TSPAN33Q86UF1 283 aa3.02□□□□□ -1.93
CCDC7-213ENST00000639290 TRABD2AQ86V40 505 aa3.02□□□□□ -1.93
CCDC7-213ENST00000639290 GRAMD2AQ8IUY3 354 aa3.02□□□□□ -1.93
CCDC7-213ENST00000639290 ZNF619Q8N2I2 560 aa3.02□□□□□ -1.93
CCDC7-213ENST00000639290 BBS5Q8N3I7 341 aa3.02□□□□□ -1.93
CCDC7-213ENST00000639290 GDAP1Q8TB36 358 aa3.02□□□□□ -1.93
CCDC7-213ENST00000639290 SLC44A1Q8WWI5 657 aa3.02□□□□□ -1.93
CCDC7-213ENST00000639290 NEUROG1Q92886 237 aa3.02□□□□□ -1.93
CCDC7-213ENST00000639290 CTHRC1Q96CG8 243 aa3.02□□□□□ -1.93
CCDC7-213ENST00000639290 DNAJA3Q96EY1 480 aa3.02□□□□□ -1.93
CCDC7-213ENST00000639290 ZNF597Q96LX8 424 aa3.02□□□□□ -1.93
CCDC7-213ENST00000639290 TSGA13Q96PP4 275 aa3.02□□□□□ -1.93
CCDC7-213ENST00000639290 ANP32EQ9BTT0 268 aa3.02□□□□□ -1.93
CCDC7-213ENST00000639290 CDADC1Q9BWV3 514 aa3.02□□□□□ -1.93
CCDC7-213ENST00000639290 ACSS3Q9H6R3 686 aa3.02□□□□□ -1.93
CCDC7-213ENST00000639290 GLRX2Q9NS18 164 aa3.02□□□□□ -1.93
CCDC7-213ENST00000639290 PIGVQ9NUD9 493 aa3.02□□□□□ -1.93
CCDC7-213ENST00000639290 TBC1D23Q9NUY8 699 aa3.02□□□□□ -1.93
CCDC7-213ENST00000639290 NEU3Q9UQ49 428 aa3.02□□□□□ -1.93
CCDC7-213ENST00000639290 LYVE1Q9Y5Y7 322 aa3.02□□□□□ -1.93
CCDC7-213ENST00000639290 PSAT1Q9Y617 370 aa3.02□□□□□ -1.93
CCDC7-213ENST00000639290 A0A0G2JMM0 328 aa3.01□□□□□ -1.93
CCDC7-213ENST00000639290 A0A1W2PPB8 328 aa3.01□□□□□ -1.93
CCDC7-213ENST00000639290 A0A1W2PRS3 328 aa3.01□□□□□ -1.93
CCDC7-213ENST00000639290 DPRXA6NFQ7 191 aa3.01□□□□□ -1.93
CCDC7-213ENST00000639290 ARHGAP42A6NI28 874 aa3.01□□□□□ -1.93
CCDC7-213ENST00000639290 KIR3DP1A8MWS1 328 aa3.01□□□□□ -1.93
CCDC7-213ENST00000639290 A8MX80 341 aa3.01□□□□□ -1.93
CCDC7-213ENST00000639290 E7EQL1 145 aa3.01□□□□□ -1.93
CCDC7-213ENST00000639290 PSMA7O14818 248 aa3.01□□□□□ -1.93
CCDC7-213ENST00000639290 STX10O60499 249 aa3.01□□□□□ -1.93
CCDC7-213ENST00000639290 VPS26AO75436 327 aa3.01□□□□□ -1.93
CCDC7-213ENST00000639290 SLU7O95391 586 aaKnown RBP3.01□□□□□ -1.93
CCDC7-213ENST00000639290 NSA2O95478 260 aaKnown RBP3.01□□□□□ -1.93
CCDC7-213ENST00000639290 PTAFRP25105 342 aa3.01□□□□□ -1.93
CCDC7-213ENST00000639290 GPD2P43304 727 aa3.01□□□□□ -1.93
CCDC7-213ENST00000639290 PITX1P78337 314 aaPredicted RBP3.01□□□□□ -1.93
CCDC7-213ENST00000639290 ROR2Q01974 943 aaKnown RBP3.01□□□□□ -1.93
CCDC7-213ENST00000639290 IL10RBQ08334 325 aa3.01□□□□□ -1.93
CCDC7-213ENST00000639290 ZNF844Q08AG5 666 aa3.01□□□□□ -1.93
CCDC7-213ENST00000639290 BST1Q10588 318 aa3.01□□□□□ -1.93
CCDC7-213ENST00000639290 SEC23BQ15437 767 aa3.01□□□□□ -1.93
CCDC7-213ENST00000639290 BLOC1S2Q6QNY1 142 aa3.01□□□□□ -1.93
CCDC7-213ENST00000639290 H1FNTQ75WM6 255 aaPredicted RBP3.01□□□□□ -1.93
CCDC7-213ENST00000639290 P4HA3Q7Z4N8 544 aa3.01□□□□□ -1.93
CCDC7-213ENST00000639290 THAP5Q7Z6K1 395 aa3.01□□□□□ -1.93
CCDC7-213ENST00000639290 STK32CQ86UX6 486 aa3.01□□□□□ -1.93
CCDC7-213ENST00000639290 OR4N5Q8IXE1 308 aa3.01□□□□□ -1.93
CCDC7-213ENST00000639290 SPC24Q8NBT2 197 aa3.01□□□□□ -1.93
CCDC7-213ENST00000639290 HM13Q8TCT9 377 aa3.01□□□□□ -1.93
CCDC7-213ENST00000639290 TIMD4Q96H15 378 aa3.01□□□□□ -1.93
CCDC7-213ENST00000639290 FAM46AQ96IP4 442 aaKnown RBP3.01□□□□□ -1.93
CCDC7-213ENST00000639290 CABS1Q96KC9 395 aa3.01□□□□□ -1.93
CCDC7-213ENST00000639290 SORCS2Q96PQ0 1159 aa3.01□□□□□ -1.93
CCDC7-213ENST00000639290 MRPL46Q9H2W6 279 aaKnown RBP3.01□□□□□ -1.93
CCDC7-213ENST00000639290 SELENONQ9NZV5 590 aa3.01□□□□□ -1.93
CCDC7-213ENST00000639290 FBLN5Q9UBX5 448 aa3.01□□□□□ -1.93
CCDC7-213ENST00000639290 ICKQ9UPZ9 632 aa3.01□□□□□ -1.93
CCDC7-213ENST00000639290 TDRKHQ9Y2W6 561 aaKnown RBP3.01□□□□□ -1.93
CCDC7-213ENST00000639290 RRP15Q9Y3B9 282 aaKnown RBP3.01□□□□□ -1.93
CCDC7-213ENST00000639290 PKHD1P08F94 4074 aa3.01□□□□□ -1.93
CCDC7-213ENST00000639290 LRRD1A4D1F6 860 aa3.01□□□□□ -1.93
CCDC7-213ENST00000639290 PLOD2O00469 737 aa3.01□□□□□ -1.93
CCDC7-213ENST00000639290 P2RX6O15547 441 aa3.01□□□□□ -1.93
CCDC7-213ENST00000639290 GOT2P00505 430 aaKnown RBP3.01□□□□□ -1.93
CCDC7-213ENST00000639290 CYP1A2P05177 515 aa3.01□□□□□ -1.93
CCDC7-213ENST00000639290 ABCB1P08183 1280 aaPredicted RBP3.01□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms