RNA–Protein interactions for RNA: ENST00000636964.1

CLN6-217, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2

Gene CLN6, Length 3,335 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-217ENST00000636964 ZDHHC13Q8IUH4 622 aa10.85□□□□□ -0.67
CLN6-217ENST00000636964 MTERF3Q96E29 417 aa10.85□□□□□ -0.67
CLN6-217ENST00000636964 RNF170Q96K19 258 aa10.85□□□□□ -0.67
CLN6-217ENST00000636964 DMRTB1Q96MA1 342 aa10.85□□□□□ -0.67
CLN6-217ENST00000636964 AGAP4Q96P64 663 aa10.85□□□□□ -0.67
CLN6-217ENST00000636964 ZBTB20Q9HC78 741 aaPredicted RBP10.85□□□□□ -0.67
CLN6-217ENST00000636964 CYB5R1Q9UHQ9 305 aa10.85□□□□□ -0.67
CLN6-217ENST00000636964 TEKT2Q9UIF3 430 aa10.85□□□□□ -0.67
CLN6-217ENST00000636964 SAMD4AQ9UPU9 718 aaKnown RBP10.85□□□□□ -0.67
CLN6-217ENST00000636964 ISPDA4D126 451 aa10.85□□□□□ -0.67
CLN6-217ENST00000636964 MYO1GB0I1T2 1018 aa10.85□□□□□ -0.67
CLN6-217ENST00000636964 PDPK1O15530 556 aa10.85□□□□□ -0.67
CLN6-217ENST00000636964 GCM2O75603 506 aaPredicted RBP10.85□□□□□ -0.67
CLN6-217ENST00000636964 ERAL1O75616 437 aaKnown RBP10.85□□□□□ -0.67
CLN6-217ENST00000636964 CTSEP14091 401 aa10.85□□□□□ -0.67
CLN6-217ENST00000636964 PVRP15151 417 aa10.85□□□□□ -0.67
CLN6-217ENST00000636964 ZNF16P17020 682 aaPredicted RBP10.85□□□□□ -0.67
CLN6-217ENST00000636964 TNFRSF1BP20333 461 aa10.85□□□□□ -0.67
CLN6-217ENST00000636964 CERS1P27544 350 aa10.85□□□□□ -0.67
CLN6-217ENST00000636964 HTR3AP46098 478 aa10.85□□□□□ -0.67
CLN6-217ENST00000636964 CRYBA2P53672 197 aa10.85□□□□□ -0.67
CLN6-217ENST00000636964 ERICH5Q6P6B1 374 aa10.85□□□□□ -0.67
CLN6-217ENST00000636964 PRSS48Q7RTY5 328 aa10.85□□□□□ -0.67
CLN6-217ENST00000636964 P2RY8Q86VZ1 359 aa10.85□□□□□ -0.67
CLN6-217ENST00000636964 ABCA7Q8IZY2 2146 aa10.85□□□□□ -0.67
CLN6-217ENST00000636964 OR52E4Q8NGH9 312 aa10.85□□□□□ -0.67
CLN6-217ENST00000636964 NFKBIDQ8NI38 313 aa10.85□□□□□ -0.67
CLN6-217ENST00000636964 HSH2DQ96JZ2 352 aa10.85□□□□□ -0.67
CLN6-217ENST00000636964 QRFPRQ96P65 431 aa10.85□□□□□ -0.67
CLN6-217ENST00000636964 TMEM246Q9BRR3 403 aa10.85□□□□□ -0.67
CLN6-217ENST00000636964 DDX31Q9H8H2 851 aaKnown RBP10.85□□□□□ -0.67
CLN6-217ENST00000636964 VNN3Q9NY84 501 aa10.85□□□□□ -0.67
CLN6-217ENST00000636964 FBXL21Q9UKT6 434 aa10.85□□□□□ -0.67
CLN6-217ENST00000636964 ATG4BQ9Y4P1 393 aa10.85□□□□□ -0.67
CLN6-217ENST00000636964 AP1M2Q9Y6Q5 423 aa10.85□□□□□ -0.67
CLN6-217ENST00000636964 SPTY2D1-AS1A0A0U1RR47 76 aa10.84□□□□□ -0.67
CLN6-217ENST00000636964 AGAP5A6NIR3 686 aa10.84□□□□□ -0.67
CLN6-217ENST00000636964 PGRMC2O15173 223 aa10.84□□□□□ -0.67
CLN6-217ENST00000636964 C8orf89P0DMQ9 161 aa10.84□□□□□ -0.67
CLN6-217ENST00000636964 VLDLRP98155 873 aa10.84□□□□□ -0.67
CLN6-217ENST00000636964 FZD5Q13467 585 aa10.84□□□□□ -0.67
CLN6-217ENST00000636964 ZIC1Q15915 447 aa10.84□□□□□ -0.67
CLN6-217ENST00000636964 ZNF691Q5VV52 312 aa10.84□□□□□ -0.67
CLN6-217ENST00000636964 ZNF425Q6IV72 752 aa10.84□□□□□ -0.67
CLN6-217ENST00000636964 TNFAIP8L2Q6P589 184 aaPredicted RBP10.84□□□□□ -0.67
CLN6-217ENST00000636964 BEND4Q6ZU67 534 aa10.84□□□□□ -0.67
CLN6-217ENST00000636964 ZER1Q7Z7L7 766 aa10.84□□□□□ -0.67
CLN6-217ENST00000636964 LINC00518Q8N0U6 118 aa10.84□□□□□ -0.67
CLN6-217ENST00000636964 ACOT4Q8N9L9 421 aa10.84□□□□□ -0.67
CLN6-217ENST00000636964 FBLIM1Q8WUP2 373 aa10.84□□□□□ -0.67
CLN6-217ENST00000636964 LGALS12Q96DT0 336 aa10.84□□□□□ -0.67
CLN6-217ENST00000636964 OR2A14Q96R47 310 aa10.84□□□□□ -0.67
CLN6-217ENST00000636964 CDX2Q99626 313 aaPredicted RBP10.84□□□□□ -0.67
CLN6-217ENST00000636964 SDHCQ99643 169 aaPredicted RBP10.84□□□□□ -0.67
CLN6-217ENST00000636964 PRDM7Q9NQW5 492 aa10.84□□□□□ -0.67
CLN6-217ENST00000636964 SNX7Q9UNH6 387 aa10.84□□□□□ -0.67
CLN6-217ENST00000636964 ERVK-19Q9WJR5 959 aa10.84□□□□□ -0.67
CLN6-217ENST00000636964 A0A0A6YYD5 115 aa10.84□□□□□ -0.67
CLN6-217ENST00000636964 A0A1W2PS29 197 aa10.84□□□□□ -0.67
CLN6-217ENST00000636964 PPIBP23284 216 aaKnown RBP10.84□□□□□ -0.67
CLN6-217ENST00000636964 FMO3P31513 532 aa10.84□□□□□ -0.67
CLN6-217ENST00000636964 CSTF2P33240 577 aaKnown RBP eCLIP10.84□□□□□ -0.67
CLN6-217ENST00000636964 SCRN3Q0VDG4 424 aa10.84□□□□□ -0.67
CLN6-217ENST00000636964 CDK5R2Q13319 367 aa10.84□□□□□ -0.67
CLN6-217ENST00000636964 ZNF181Q2M3W8 571 aa10.84□□□□□ -0.67
CLN6-217ENST00000636964 C18orf63Q68DL7 685 aa10.84□□□□□ -0.67
CLN6-217ENST00000636964 FBXO42Q6P3S6 717 aa10.84□□□□□ -0.67
CLN6-217ENST00000636964 ABHD17CQ6PCB6 329 aa10.84□□□□□ -0.67
CLN6-217ENST00000636964 B3GNT8Q7Z7M8 397 aa10.84□□□□□ -0.67
CLN6-217ENST00000636964 OR8H2Q8N162 312 aa10.84□□□□□ -0.67
CLN6-217ENST00000636964 ZNF687Q8N1G0 1237 aa10.84□□□□□ -0.67
CLN6-217ENST00000636964 CADM2Q8N3J6 435 aa10.84□□□□□ -0.67
CLN6-217ENST00000636964 C11orf65Q8NCR3 313 aa10.84□□□□□ -0.67
CLN6-217ENST00000636964 OR52N2Q8NGI0 321 aa10.84□□□□□ -0.67
CLN6-217ENST00000636964 TEX47Q8TBZ9 253 aa10.84□□□□□ -0.67
CLN6-217ENST00000636964 KLHDC7BQ96G42 594 aa10.84□□□□□ -0.67
CLN6-217ENST00000636964 SNX18Q96RF0 628 aa10.84□□□□□ -0.67
CLN6-217ENST00000636964 BARD1Q99728 777 aaKnown RBP10.84□□□□□ -0.67
CLN6-217ENST00000636964 DUSP12Q9UNI6 340 aa10.84□□□□□ -0.67
CLN6-217ENST00000636964 MRPS7Q9Y2R9 242 aaKnown RBP10.84□□□□□ -0.67
CLN6-217ENST00000636964 IGHV1OR15-9A0A0B4J2B8 117 aa10.84□□□□□ -0.67
CLN6-217ENST00000636964 A0A1W2PPC4 97 aa10.84□□□□□ -0.67
CLN6-217ENST00000636964 DSCR3O14972 297 aa10.84□□□□□ -0.67
CLN6-217ENST00000636964 NDUFS6O75380 124 aaKnown RBP10.84□□□□□ -0.67
CLN6-217ENST00000636964 TNFRSF21O75509 655 aa10.84□□□□□ -0.67
CLN6-217ENST00000636964 PTTG1O95997 202 aa10.84□□□□□ -0.67
CLN6-217ENST00000636964 RAC2P15153 192 aa10.84□□□□□ -0.67
CLN6-217ENST00000636964 UGT2B7P16662 529 aa10.84□□□□□ -0.67
CLN6-217ENST00000636964 ST13P50502 369 aaKnown RBP10.84□□□□□ -0.67
CLN6-217ENST00000636964 CCR5P51681 352 aa10.84□□□□□ -0.67
CLN6-217ENST00000636964 PPP1CAP62136 330 aa10.84□□□□□ -0.67
CLN6-217ENST00000636964 BTN3A2P78410 334 aa10.84□□□□□ -0.67
CLN6-217ENST00000636964 RAPSNQ13702 412 aa10.84□□□□□ -0.67
CLN6-217ENST00000636964 SLC9A5Q14940 896 aa10.84□□□□□ -0.67
CLN6-217ENST00000636964 SMN1Q16637 294 aaKnown RBP10.84□□□□□ -0.67
CLN6-217ENST00000636964 SPDYE7PQ495Y7 208 aa10.84□□□□□ -0.67
CLN6-217ENST00000636964 ZNF438Q7Z4V0 828 aa10.84□□□□□ -0.67
CLN6-217ENST00000636964 PAQR7Q86WK9 346 aa10.84□□□□□ -0.67
CLN6-217ENST00000636964 STX12Q86Y82 276 aa10.84□□□□□ -0.67
CLN6-217ENST00000636964 SVOPQ8N4V2 548 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms