RNA–Protein interactions for RNA: ENST00000636843.1

CTSD-208, Transcript of cathepsin D, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CTSD, Length 1,512 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-208ENST00000636843 RPL38P63173 70 aaKnown RBP11.7□□□□□ -0.54
CTSD-208ENST00000636843 RFTN2Q52LD8 501 aaPredicted RBP11.7□□□□□ -0.54
CTSD-208ENST00000636843 TOR1AIP1Q5JTV8 583 aa11.7□□□□□ -0.54
CTSD-208ENST00000636843 C6orf10Q5SRN2 563 aa11.7□□□□□ -0.54
CTSD-208ENST00000636843 LIPJQ5W064 366 aa11.7□□□□□ -0.54
CTSD-208ENST00000636843 TMEM211Q6ICI0 200 aa11.7□□□□□ -0.54
CTSD-208ENST00000636843 C3P1Q6ZMU1 363 aa11.7□□□□□ -0.54
CTSD-208ENST00000636843 TMPRSS11BQ86T26 416 aa11.7□□□□□ -0.54
CTSD-208ENST00000636843 SULF2Q8IWU5 870 aa11.7□□□□□ -0.54
CTSD-208ENST00000636843 CYP4Z2PQ8N1L4 340 aa11.7□□□□□ -0.54
CTSD-208ENST00000636843 CA13Q8N1Q1 262 aa11.7□□□□□ -0.54
CTSD-208ENST00000636843 TMEM156Q8N614 296 aa11.7□□□□□ -0.54
CTSD-208ENST00000636843 FAM156AQ8NDB6 213 aa11.7□□□□□ -0.54
CTSD-208ENST00000636843 TTLQ8NG68 377 aa11.7□□□□□ -0.54
CTSD-208ENST00000636843 C16orf52Q8NHV5 167 aa11.7□□□□□ -0.54
CTSD-208ENST00000636843 CREB3L4Q8TEY5 395 aa11.7□□□□□ -0.54
CTSD-208ENST00000636843 TREX2Q9BQ50 279 aaPredicted RBP11.7□□□□□ -0.54
CTSD-208ENST00000636843 PCDHAC1Q9H158 963 aa11.7□□□□□ -0.54
CTSD-208ENST00000636843 KLHL31Q9H511 634 aa11.7□□□□□ -0.54
CTSD-208ENST00000636843 IL1RL2Q9HB29 575 aa11.7□□□□□ -0.54
CTSD-208ENST00000636843 LRTM1Q9HBL6 345 aa11.7□□□□□ -0.54
CTSD-208ENST00000636843 C1orf109Q9NX04 203 aa11.7□□□□□ -0.54
CTSD-208ENST00000636843 ITGB1BP2Q9UKP3 347 aa11.7□□□□□ -0.54
CTSD-208ENST00000636843 PPIEQ9UNP9 301 aaKnown RBP11.7□□□□□ -0.54
CTSD-208ENST00000636843 SLC22A14Q9Y267 594 aa11.7□□□□□ -0.54
CTSD-208ENST00000636843 ANKRD17O75179 2603 aaKnown RBP11.7□□□□□ -0.54
CTSD-208ENST00000636843 ADGRG4Q8IZF6 3080 aa11.7□□□□□ -0.54
CTSD-208ENST00000636843 CSMD2Q7Z408 3487 aa11.7□□□□□ -0.54
CTSD-208ENST00000636843 C2CD3Q4AC94 2353 aa11.7□□□□□ -0.54
CTSD-208ENST00000636843 TRBV11-1A0A0K0K1C0 115 aa11.7□□□□□ -0.54
CTSD-208ENST00000636843 SYNDIG1LA6NDD5 238 aa11.7□□□□□ -0.54
CTSD-208ENST00000636843 AQP12BA6NM10 295 aa11.7□□□□□ -0.54
CTSD-208ENST00000636843 C9JVG2 144 aa11.7□□□□□ -0.54
CTSD-208ENST00000636843 ANKRD28O15084 1053 aa11.7□□□□□ -0.54
CTSD-208ENST00000636843 DNAJA2O60884 412 aa11.7□□□□□ -0.54
CTSD-208ENST00000636843 RSL1D1O76021 490 aaKnown RBP11.7□□□□□ -0.54
CTSD-208ENST00000636843 MYO1DO94832 1006 aa11.7□□□□□ -0.54
CTSD-208ENST00000636843 GSTM2P28161 218 aa11.7□□□□□ -0.54
CTSD-208ENST00000636843 PEX2P28328 305 aa11.7□□□□□ -0.54
CTSD-208ENST00000636843 MAPK1P28482 360 aa11.7□□□□□ -0.54
CTSD-208ENST00000636843 SLC7A1P30825 629 aa11.7□□□□□ -0.54
CTSD-208ENST00000636843 MRPS35P82673 323 aaKnown RBP11.7□□□□□ -0.54
CTSD-208ENST00000636843 TLE4Q04727 773 aa11.7□□□□□ -0.54
CTSD-208ENST00000636843 PCDH1Q08174 1060 aa11.7□□□□□ -0.54
CTSD-208ENST00000636843 PAGE3Q5JUK9 113 aa11.7□□□□□ -0.54
CTSD-208ENST00000636843 LPCAT4Q643R3 524 aa11.7□□□□□ -0.54
CTSD-208ENST00000636843 MEX3BQ6ZN04 569 aaKnown RBP11.7□□□□□ -0.54
CTSD-208ENST00000636843 AQP12AQ8IXF9 295 aa11.7□□□□□ -0.54
CTSD-208ENST00000636843 ZFP62Q8NB50 900 aaPredicted RBP11.7□□□□□ -0.54
CTSD-208ENST00000636843 ADCY4Q8NFM4 1077 aa11.7□□□□□ -0.54
CTSD-208ENST00000636843 SELENOMQ8WWX9 145 aa11.7□□□□□ -0.54
CTSD-208ENST00000636843 GAL3ST3Q96A11 431 aa11.7□□□□□ -0.54
CTSD-208ENST00000636843 VPS33AQ96AX1 596 aa11.7□□□□□ -0.54
CTSD-208ENST00000636843 VMP1Q96GC9 406 aa11.7□□□□□ -0.54
CTSD-208ENST00000636843 BTBD9Q96Q07 612 aa11.7□□□□□ -0.54
CTSD-208ENST00000636843 NR1H4Q96RI1 486 aaPredicted RBP11.7□□□□□ -0.54
CTSD-208ENST00000636843 SLC39A3Q9BRY0 314 aa11.7□□□□□ -0.54
CTSD-208ENST00000636843 NPLQ9BXD5 320 aaPredicted RBP11.7□□□□□ -0.54
CTSD-208ENST00000636843 ELOVL6Q9H5J4 265 aa11.7□□□□□ -0.54
CTSD-208ENST00000636843 MCCC2Q9HCC0 563 aa11.7□□□□□ -0.54
CTSD-208ENST00000636843 TIMMDC1Q9NPL8 285 aa11.7□□□□□ -0.54
CTSD-208ENST00000636843 CMTM6Q9NX76 183 aa11.7□□□□□ -0.54
CTSD-208ENST00000636843 ACTR3BQ9P1U1 418 aa11.7□□□□□ -0.54
CTSD-208ENST00000636843 RIMS3Q9UJD0 308 aa11.7□□□□□ -0.54
CTSD-208ENST00000636843 FBXW2Q9UKT8 454 aa11.7□□□□□ -0.54
CTSD-208ENST00000636843 TMED5Q9Y3A6 229 aa11.7□□□□□ -0.54
CTSD-208ENST00000636843 DTNAQ9Y4J8 743 aa11.7□□□□□ -0.54
CTSD-208ENST00000636843 AP4S1Q9Y587 144 aa11.7□□□□□ -0.54
CTSD-208ENST00000636843 TACC2O95359 2948 aa11.69□□□□□ -0.54
CTSD-208ENST00000636843 A0A1B0GTH9 108 aa11.69□□□□□ -0.54
CTSD-208ENST00000636843 C4orf51C9J302 202 aa11.69□□□□□ -0.54
CTSD-208ENST00000636843 CLDN4O14493 209 aa11.69□□□□□ -0.54
CTSD-208ENST00000636843 HS6ST1O60243 411 aa11.69□□□□□ -0.54
CTSD-208ENST00000636843 SEC22BO75396 215 aa11.69□□□□□ -0.54
CTSD-208ENST00000636843 ITGA10O75578 1167 aa11.69□□□□□ -0.54
CTSD-208ENST00000636843 PDYNP01213 254 aa11.69□□□□□ -0.54
CTSD-208ENST00000636843 IL6P05231 212 aa11.69□□□□□ -0.54
CTSD-208ENST00000636843 TPOP07202 933 aa11.69□□□□□ -0.54
CTSD-208ENST00000636843 C1GALT1C1LP0DN25 315 aa11.69□□□□□ -0.54
CTSD-208ENST00000636843 PRPS2P11908 318 aa11.69□□□□□ -0.54
CTSD-208ENST00000636843 ZNF10P21506 573 aaPredicted RBP11.69□□□□□ -0.54
CTSD-208ENST00000636843 HSD17B7P56937 341 aa11.69□□□□□ -0.54
CTSD-208ENST00000636843 BTN3A2P78410 334 aa11.69□□□□□ -0.54
CTSD-208ENST00000636843 BLMHQ13867 455 aa11.69□□□□□ -0.54
CTSD-208ENST00000636843 CPSF6Q16630 551 aaKnown RBP eCLIP11.69□□□□□ -0.54
CTSD-208ENST00000636843 TIGD2Q4W5G0 525 aa11.69□□□□□ -0.54
CTSD-208ENST00000636843 LCN8Q6JVE9 175 aa11.69□□□□□ -0.54
CTSD-208ENST00000636843 CD163Q86VB7 1156 aa11.69□□□□□ -0.54
CTSD-208ENST00000636843 GPALPP1Q8IXQ4 340 aa11.69□□□□□ -0.54
CTSD-208ENST00000636843 ICA1LQ8NDH6 482 aa11.69□□□□□ -0.54
CTSD-208ENST00000636843 ASB5Q8WWX0 329 aa11.69□□□□□ -0.54
CTSD-208ENST00000636843 CMTM7Q96FZ5 175 aa11.69□□□□□ -0.54
CTSD-208ENST00000636843 HBEGFQ99075 208 aa11.69□□□□□ -0.54
CTSD-208ENST00000636843 DPY30Q9C005 99 aa11.69□□□□□ -0.54
CTSD-208ENST00000636843 AICDAQ9GZX7 198 aa11.69□□□□□ -0.54
CTSD-208ENST00000636843 COPS7BQ9H9Q2 264 aaPredicted RBP11.69□□□□□ -0.54
CTSD-208ENST00000636843 PNO1Q9NRX1 252 aaKnown RBP11.69□□□□□ -0.54
CTSD-208ENST00000636843 PLSCR2Q9NRY7 297 aa11.69□□□□□ -0.54
CTSD-208ENST00000636843 FARSBQ9NSD9 589 aaKnown RBP11.69□□□□□ -0.54
CTSD-208ENST00000636843 YARS2Q9Y2Z4 477 aaKnown RBP11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms