RNA–Protein interactions for RNA: ENST00000594298.5

SHKBP1-203, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 716 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-203ENST00000594298 PRPH2P23942 346 aa16.09■□□□□ 0.17
SHKBP1-203ENST00000594298 GRK2P25098 689 aa16.09■□□□□ 0.17
SHKBP1-203ENST00000594298 KIR2DL3P43628 341 aa16.09■□□□□ 0.17
SHKBP1-203ENST00000594298 ALDH9A1P49189 494 aa16.09■□□□□ 0.17
SHKBP1-203ENST00000594298 HSPB2Q16082 182 aa16.09■□□□□ 0.17
SHKBP1-203ENST00000594298 SH2D4BQ5SQS7 431 aa16.09■□□□□ 0.17
SHKBP1-203ENST00000594298 PRAMEF20Q5VT98 475 aa16.09■□□□□ 0.17
SHKBP1-203ENST00000594298 HHATQ5VTY9 493 aa16.09■□□□□ 0.17
SHKBP1-203ENST00000594298 KANK2Q63ZY3 851 aa16.09■□□□□ 0.17
SHKBP1-203ENST00000594298 SEM1Q6ZVN7 128 aa16.09■□□□□ 0.17
SHKBP1-203ENST00000594298 TGIF2LYQ8IUE0 185 aa16.09■□□□□ 0.17
SHKBP1-203ENST00000594298 ZZZ3Q8IYH5 903 aa16.09■□□□□ 0.17
SHKBP1-203ENST00000594298 ULK2Q8IYT8 1036 aa16.09■□□□□ 0.17
SHKBP1-203ENST00000594298 KIRREL3Q8IZU9 778 aa16.09■□□□□ 0.17
SHKBP1-203ENST00000594298 OR10G3Q8NGC4 313 aa16.09■□□□□ 0.17
SHKBP1-203ENST00000594298 C16orf78Q8WTQ4 265 aa16.09■□□□□ 0.17
SHKBP1-203ENST00000594298 CCT7Q99832 543 aa16.09■□□□□ 0.17
SHKBP1-203ENST00000594298 POLDIP3Q9BY77 421 aaKnown RBP16.09■□□□□ 0.17
SHKBP1-203ENST00000594298 TMBIM4Q9HC24 238 aa16.09■□□□□ 0.17
SHKBP1-203ENST00000594298 TNFRSF12AQ9NP84 129 aa16.09■□□□□ 0.17
SHKBP1-203ENST00000594298 RASSF1Q9NS23 344 aa16.09■□□□□ 0.17
SHKBP1-203ENST00000594298 CCM2LQ9NUG4 571 aaPredicted RBP16.09■□□□□ 0.17
SHKBP1-203ENST00000594298 ALKBH4Q9NXW9 302 aa16.09■□□□□ 0.17
SHKBP1-203ENST00000594298 ST6GALNAC2Q9UJ37 374 aa16.09■□□□□ 0.17
SHKBP1-203ENST00000594298 CNOT11Q9UKZ1 510 aaKnown RBP16.09■□□□□ 0.17
SHKBP1-203ENST00000594298 DLGAP4Q9Y2H0 992 aa16.09■□□□□ 0.17
SHKBP1-203ENST00000594298 NF1P21359 2839 aa16.08■□□□□ 0.16
SHKBP1-203ENST00000594298 WDR91A4D1P6 747 aa16.08■□□□□ 0.16
SHKBP1-203ENST00000594298 ANKRD33BA6NCL7 494 aa16.08■□□□□ 0.16
SHKBP1-203ENST00000594298 OR6C76A6NM76 312 aa16.08■□□□□ 0.16
SHKBP1-203ENST00000594298 WASHC1A8K0Z3 465 aa16.08■□□□□ 0.16
SHKBP1-203ENST00000594298 TMEM114B3SHH9 223 aa16.08■□□□□ 0.16
SHKBP1-203ENST00000594298 NPIPB8E9PQR5 432 aa16.08■□□□□ 0.16
SHKBP1-203ENST00000594298 ERAL1O75616 437 aaKnown RBP16.08■□□□□ 0.16
SHKBP1-203ENST00000594298 HSPA4LO95757 839 aa16.08■□□□□ 0.16
SHKBP1-203ENST00000594298 CHRNGP07510 517 aa16.08■□□□□ 0.16
SHKBP1-203ENST00000594298 DHRS4L1P0CG22 281 aa16.08■□□□□ 0.16
SHKBP1-203ENST00000594298 CPMP14384 443 aa16.08■□□□□ 0.16
SHKBP1-203ENST00000594298 CSNK2A2P19784 350 aaPredicted RBP16.08■□□□□ 0.16
SHKBP1-203ENST00000594298 ERVK-8P63133 956 aa16.08■□□□□ 0.16
SHKBP1-203ENST00000594298 RAE1P78406 368 aaKnown RBP16.08■□□□□ 0.16
SHKBP1-203ENST00000594298 ZNF267Q14586 743 aaPredicted RBP16.08■□□□□ 0.16
SHKBP1-203ENST00000594298 EBPQ15125 230 aaKnown RBP16.08■□□□□ 0.16
SHKBP1-203ENST00000594298 CHI3L2Q15782 390 aa16.08■□□□□ 0.16
SHKBP1-203ENST00000594298 NTRK2Q16620 822 aa16.08■□□□□ 0.16
SHKBP1-203ENST00000594298 FBXL19-AS1Q494R0 122 aa16.08■□□□□ 0.16
SHKBP1-203ENST00000594298 TBCELQ5QJ74 424 aa16.08■□□□□ 0.16
SHKBP1-203ENST00000594298 FAM219BQ5XKK7 198 aa16.08■□□□□ 0.16
SHKBP1-203ENST00000594298 SLC29A4Q7RTT9 530 aa16.08■□□□□ 0.16
SHKBP1-203ENST00000594298 DDIASQ8IXT1 998 aa16.08■□□□□ 0.16
SHKBP1-203ENST00000594298 OR6Y1Q8NGX8 325 aa16.08■□□□□ 0.16
SHKBP1-203ENST00000594298 ZBTB9Q96C00 473 aa16.08■□□□□ 0.16
SHKBP1-203ENST00000594298 C11orf24Q96F05 449 aaPredicted RBP16.08■□□□□ 0.16
SHKBP1-203ENST00000594298 PAIP2Q9BPZ3 127 aaKnown RBP16.08■□□□□ 0.16
SHKBP1-203ENST00000594298 WWTR1Q9GZV5 400 aa16.08■□□□□ 0.16
SHKBP1-203ENST00000594298 SLC6A15Q9H2J7 730 aa16.08■□□□□ 0.16
SHKBP1-203ENST00000594298 CLEC4MQ9H2X3 399 aaPredicted RBP16.08■□□□□ 0.16
SHKBP1-203ENST00000594298 LRTM1Q9HBL6 345 aa16.08■□□□□ 0.16
SHKBP1-203ENST00000594298 GIMAP4Q9NUV9 329 aa16.08■□□□□ 0.16
SHKBP1-203ENST00000594298 C1orf109Q9NX04 203 aa16.08■□□□□ 0.16
SHKBP1-203ENST00000594298 NKIRAS1Q9NYS0 192 aa16.08■□□□□ 0.16
SHKBP1-203ENST00000594298 CES1P1Q9UKY3 287 aa16.08■□□□□ 0.16
SHKBP1-203ENST00000594298 ERVK-19Q9WJR5 959 aa16.08■□□□□ 0.16
SHKBP1-203ENST00000594298 DNAJC15Q9Y5T4 150 aa16.08■□□□□ 0.16
SHKBP1-203ENST00000594298 SETD2Q9BYW2 2564 aaPredicted RBP16.08■□□□□ 0.16
SHKBP1-203ENST00000594298 AHRRA9YTQ3 701 aa16.07■□□□□ 0.16
SHKBP1-203ENST00000594298 TRIM3O75382 744 aaPredicted RBP16.07■□□□□ 0.16
SHKBP1-203ENST00000594298 IL3P08700 152 aa16.07■□□□□ 0.16
SHKBP1-203ENST00000594298 SLC18A1P54219 525 aa16.07■□□□□ 0.16
SHKBP1-203ENST00000594298 SLC37A1P57057 533 aa16.07■□□□□ 0.16
SHKBP1-203ENST00000594298 MAGOHP61326 146 aaKnown RBP16.07■□□□□ 0.16
SHKBP1-203ENST00000594298 ZNF763Q0D2J5 394 aa16.07■□□□□ 0.16
SHKBP1-203ENST00000594298 RNF111Q6ZNA4 994 aa16.07■□□□□ 0.16
SHKBP1-203ENST00000594298 HDXQ7Z353 690 aa16.07■□□□□ 0.16
SHKBP1-203ENST00000594298 GALNT12Q8IXK2 581 aa16.07■□□□□ 0.16
SHKBP1-203ENST00000594298 LIX1Q8N485 282 aa16.07■□□□□ 0.16
SHKBP1-203ENST00000594298 RELL2Q8NC24 303 aaPredicted RBP16.07■□□□□ 0.16
SHKBP1-203ENST00000594298 FAM13CQ8NE31 585 aa16.07■□□□□ 0.16
SHKBP1-203ENST00000594298 TWIST2Q8WVJ9 160 aa16.07■□□□□ 0.16
SHKBP1-203ENST00000594298 UCN3Q969E3 161 aa16.07■□□□□ 0.16
SHKBP1-203ENST00000594298 KLHL29Q96CT2 875 aa16.07■□□□□ 0.16
SHKBP1-203ENST00000594298 GAL3ST4Q96RP7 486 aa16.07■□□□□ 0.16
SHKBP1-203ENST00000594298 SH3GL2Q99962 352 aa16.07■□□□□ 0.16
SHKBP1-203ENST00000594298 GPATCH1Q9BRR8 931 aaKnown RBP16.07■□□□□ 0.16
SHKBP1-203ENST00000594298 DOHHQ9BU89 302 aa16.07■□□□□ 0.16
SHKBP1-203ENST00000594298 CXorf21Q9HAI6 301 aa16.07■□□□□ 0.16
SHKBP1-203ENST00000594298 EHD3Q9NZN3 535 aa16.07■□□□□ 0.16
SHKBP1-203ENST00000594298 CRIM1Q9NZV1 1036 aa16.07■□□□□ 0.16
SHKBP1-203ENST00000594298 UTS2RQ9UKP6 389 aa16.07■□□□□ 0.16
SHKBP1-203ENST00000594298 EDARQ9UNE0 448 aa16.07■□□□□ 0.16
SHKBP1-203ENST00000594298 EPB41L3Q9Y2J2 1087 aaPredicted RBP16.07■□□□□ 0.16
SHKBP1-203ENST00000594298 TMED5Q9Y3A6 229 aa16.07■□□□□ 0.16
SHKBP1-203ENST00000594298 MTORP42345 2549 aa16.06■□□□□ 0.16
SHKBP1-203ENST00000594298 SPG11Q96JI7 2443 aa16.06■□□□□ 0.16
SHKBP1-203ENST00000594298 DNAJC13O75165 2243 aa16.06■□□□□ 0.16
SHKBP1-203ENST00000594298 TMEM120BA0PK00 339 aa16.06■□□□□ 0.16
SHKBP1-203ENST00000594298 DVL2O14641 736 aa16.06■□□□□ 0.16
SHKBP1-203ENST00000594298 EPPINO95925 133 aa16.06■□□□□ 0.16
SHKBP1-203ENST00000594298 CLPSP04118 112 aa16.06■□□□□ 0.16
SHKBP1-203ENST00000594298 LINC00032P0C843 101 aa16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms