RNA–Protein interactions for RNA: ENST00000592790.1

VMP1-216, Transcript of vacuole membrane protein 1, humanhuman

Gene VMP1, Length 4,325 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-216ENST00000592790 ZNF683Q8IZ20 524 aa3.35□□□□□ -1.87
VMP1-216ENST00000592790 RNF113BQ8IZP6 322 aaKnown RBP3.35□□□□□ -1.87
VMP1-216ENST00000592790 UBE2J2Q8N2K1 259 aa3.35□□□□□ -1.87
VMP1-216ENST00000592790 C10orf53Q8N6V4 93 aa3.35□□□□□ -1.87
VMP1-216ENST00000592790 OR5T2Q8NGG2 359 aa3.35□□□□□ -1.87
VMP1-216ENST00000592790 OR5H6Q8NGV6 325 aa3.35□□□□□ -1.87
VMP1-216ENST00000592790 OR56A3Q8NH54 315 aa3.35□□□□□ -1.87
VMP1-216ENST00000592790 LILRB1Q8NHL6 650 aaPredicted RBP3.35□□□□□ -1.87
VMP1-216ENST00000592790 C1orf216Q8TAB5 229 aa3.35□□□□□ -1.87
VMP1-216ENST00000592790 CEP76Q8TAP6 659 aa3.35□□□□□ -1.87
VMP1-216ENST00000592790 RAB7BQ96AH8 199 aa3.35□□□□□ -1.87
VMP1-216ENST00000592790 TCEAL4Q96EI5 215 aa3.35□□□□□ -1.87
VMP1-216ENST00000592790 NARS2Q96I59 477 aaKnown RBP3.35□□□□□ -1.87
VMP1-216ENST00000592790 FERD3LQ96RJ6 166 aa3.35□□□□□ -1.87
VMP1-216ENST00000592790 C11orf54Q9H0W9 315 aaPredicted RBP3.35□□□□□ -1.87
VMP1-216ENST00000592790 OR51B5Q9H339 312 aa3.35□□□□□ -1.87
VMP1-216ENST00000592790 OSGEPL1Q9H4B0 414 aa3.35□□□□□ -1.87
VMP1-216ENST00000592790 ACTL8Q9H568 366 aa3.35□□□□□ -1.87
VMP1-216ENST00000592790 SLC25A19Q9HC21 320 aa3.35□□□□□ -1.87
VMP1-216ENST00000592790 FGF20Q9NP95 211 aaPredicted RBP3.35□□□□□ -1.87
VMP1-216ENST00000592790 BRD7Q9NPI1 651 aa3.35□□□□□ -1.87
VMP1-216ENST00000592790 MKKSQ9NPJ1 570 aaPredicted RBP3.35□□□□□ -1.87
VMP1-216ENST00000592790 TMEM39AQ9NV64 488 aa3.35□□□□□ -1.87
VMP1-216ENST00000592790 MAT2BQ9NZL9 334 aa3.35□□□□□ -1.87
VMP1-216ENST00000592790 KLHL9Q9P2J3 617 aa3.35□□□□□ -1.87
VMP1-216ENST00000592790 KCNN3Q9UGI6 736 aa3.35□□□□□ -1.87
VMP1-216ENST00000592790 ABT1Q9ULW3 272 aaKnown RBP3.35□□□□□ -1.87
VMP1-216ENST00000592790 NOX1Q9Y5S8 564 aa3.35□□□□□ -1.87
VMP1-216ENST00000592790 NPFFR2Q9Y5X5 522 aa3.35□□□□□ -1.87
VMP1-216ENST00000592790 FKBP7Q9Y680 259 aa3.35□□□□□ -1.87
VMP1-216ENST00000592790 CDH23Q9H251 3354 aa3.35□□□□□ -1.87
VMP1-216ENST00000592790 ZNF236Q9UL36 1845 aa3.35□□□□□ -1.87
VMP1-216ENST00000592790 C17orf113A0A1B0GUU1 675 aa3.35□□□□□ -1.87
VMP1-216ENST00000592790 ANXA2P2A6NMY6 339 aa3.35□□□□□ -1.87
VMP1-216ENST00000592790 B4DXG7 233 aa3.35□□□□□ -1.87
VMP1-216ENST00000592790 GPR89AB7ZAQ6 455 aa3.35□□□□□ -1.87
VMP1-216ENST00000592790 NEDD8-MDP1E9PL57 170 aa3.35□□□□□ -1.87
VMP1-216ENST00000592790 M0R082 166 aa3.35□□□□□ -1.87
VMP1-216ENST00000592790 GFRA2O00451 464 aa3.35□□□□□ -1.87
VMP1-216ENST00000592790 EEF1E1O43324 174 aaKnown RBP3.35□□□□□ -1.87
VMP1-216ENST00000592790 SULT1B1O43704 296 aa3.35□□□□□ -1.87
VMP1-216ENST00000592790 FZD6O60353 706 aa3.35□□□□□ -1.87
VMP1-216ENST00000592790 ZNF780AO75290 641 aaPredicted RBP3.35□□□□□ -1.87
VMP1-216ENST00000592790 PPM1BO75688 479 aa3.35□□□□□ -1.87
VMP1-216ENST00000592790 GATBO75879 557 aaKnown RBP3.35□□□□□ -1.87
VMP1-216ENST00000592790 UBXN7O94888 489 aa3.35□□□□□ -1.87
VMP1-216ENST00000592790 SLCO2B1O94956 709 aa3.35□□□□□ -1.87
VMP1-216ENST00000592790 KCNK2O95069 426 aa3.35□□□□□ -1.87
VMP1-216ENST00000592790 GJB5O95377 273 aa3.35□□□□□ -1.87
VMP1-216ENST00000592790 WDPCPO95876 746 aa3.35□□□□□ -1.87
VMP1-216ENST00000592790 OLFM2O95897 454 aa3.35□□□□□ -1.87
VMP1-216ENST00000592790 CD2P06729 351 aa3.35□□□□□ -1.87
VMP1-216ENST00000592790 ANXA2P07355 339 aaKnown RBP3.35□□□□□ -1.87
VMP1-216ENST00000592790 GPR89BP0CG08 455 aa3.35□□□□□ -1.87
VMP1-216ENST00000592790 UBL4AP11441 157 aa3.35□□□□□ -1.87
VMP1-216ENST00000592790 FUT4P22083 530 aa3.35□□□□□ -1.87
VMP1-216ENST00000592790 TACR1P25103 407 aa3.35□□□□□ -1.87
VMP1-216ENST00000592790 CST5P28325 142 aaPredicted RBP3.35□□□□□ -1.87
VMP1-216ENST00000592790 RPS19P39019 145 aaKnown RBP3.35□□□□□ -1.87
VMP1-216ENST00000592790 RGRP47804 291 aa3.35□□□□□ -1.87
VMP1-216ENST00000592790 PRLHRP49683 370 aa3.35□□□□□ -1.87
VMP1-216ENST00000592790 ILF3Q12906 894 aaKnown RBP eCLIP3.35□□□□□ -1.87
VMP1-216ENST00000592790 MAPK14Q16539 360 aa3.35□□□□□ -1.87
VMP1-216ENST00000592790 NKG7Q16617 165 aa3.35□□□□□ -1.87
VMP1-216ENST00000592790 FAM214AQ32MH5 1076 aa3.35□□□□□ -1.87
VMP1-216ENST00000592790 CATSPEREQ5SY80 951 aa3.35□□□□□ -1.87
VMP1-216ENST00000592790 SLC8B1Q6J4K2 584 aa3.35□□□□□ -1.87
VMP1-216ENST00000592790 ARL9Q6T311 187 aa3.35□□□□□ -1.87
VMP1-216ENST00000592790 QSOX2Q6ZRP7 698 aa3.35□□□□□ -1.87
VMP1-216ENST00000592790 RTL10Q7L3V2 364 aa3.35□□□□□ -1.87
VMP1-216ENST00000592790 ZSCAN2Q7Z7L9 614 aaPredicted RBP3.35□□□□□ -1.87
VMP1-216ENST00000592790 PEG10Q86TG7 708 aaKnown RBP3.35□□□□□ -1.87
VMP1-216ENST00000592790 ZNF227Q86WZ6 799 aa3.35□□□□□ -1.87
VMP1-216ENST00000592790 PTOV1Q86YD1 416 aa3.35□□□□□ -1.87
VMP1-216ENST00000592790 PHC2Q8IXK0 858 aa3.35□□□□□ -1.87
VMP1-216ENST00000592790 MSRB3Q8IXL7 192 aa3.35□□□□□ -1.87
VMP1-216ENST00000592790 PDZD9Q8IXQ8 264 aa3.35□□□□□ -1.87
VMP1-216ENST00000592790 SLC22A15Q8IZD6 547 aa3.35□□□□□ -1.87
VMP1-216ENST00000592790 OR6V1Q8N148 313 aa3.35□□□□□ -1.87
VMP1-216ENST00000592790 GHDCQ8N2G8 530 aa3.35□□□□□ -1.87
VMP1-216ENST00000592790 CADM2Q8N3J6 435 aa3.35□□□□□ -1.87
VMP1-216ENST00000592790 LINC00469Q8N7U9 141 aa3.35□□□□□ -1.87
VMP1-216ENST00000592790 FAM110BQ8TC76 370 aa3.35□□□□□ -1.87
VMP1-216ENST00000592790 FANK1Q8TC84 345 aa3.35□□□□□ -1.87
VMP1-216ENST00000592790 SLC2A12Q8TD20 617 aa3.35□□□□□ -1.87
VMP1-216ENST00000592790 CREB3L4Q8TEY5 395 aa3.35□□□□□ -1.87
VMP1-216ENST00000592790 ACOT11Q8WXI4 607 aaPredicted RBP3.35□□□□□ -1.87
VMP1-216ENST00000592790 GATAD2BQ8WXI9 593 aa3.35□□□□□ -1.87
VMP1-216ENST00000592790 TANKQ92844 425 aa3.35□□□□□ -1.87
VMP1-216ENST00000592790 MAL2Q969L2 176 aa3.35□□□□□ -1.87
VMP1-216ENST00000592790 RERGQ96A58 199 aaPredicted RBP3.35□□□□□ -1.87
VMP1-216ENST00000592790 EGLN2Q96KS0 407 aa3.35□□□□□ -1.87
VMP1-216ENST00000592790 C7orf34Q96L11 122 aa3.35□□□□□ -1.87
VMP1-216ENST00000592790 CMTM3Q96MX0 182 aa3.35□□□□□ -1.87
VMP1-216ENST00000592790 LRFN5Q96NI6 719 aa3.35□□□□□ -1.87
VMP1-216ENST00000592790 SCGB3A2Q96PL1 93 aa3.35□□□□□ -1.87
VMP1-216ENST00000592790 OR2A14Q96R47 310 aa3.35□□□□□ -1.87
VMP1-216ENST00000592790 MCHR1Q99705 422 aa3.35□□□□□ -1.87
VMP1-216ENST00000592790 TMEM43Q9BTV4 400 aa3.35□□□□□ -1.87
VMP1-216ENST00000592790 ARHGAP39Q9C0H5 1083 aa3.35□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms