RNA–Protein interactions for RNA: ENST00000591877.1

VMP1-213, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 791 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-213ENST00000591877 E2F3O00716 465 aa7.01□□□□□ -1.29
VMP1-213ENST00000591877 CTIFO43310 598 aaKnown RBP7.01□□□□□ -1.29
VMP1-213ENST00000591877 RAD51CO43502 376 aa7.01□□□□□ -1.29
VMP1-213ENST00000591877 RDH16O75452 317 aa7.01□□□□□ -1.29
VMP1-213ENST00000591877 KRT38O76015 456 aa7.01□□□□□ -1.29
VMP1-213ENST00000591877 ZFPL1O95159 310 aa7.01□□□□□ -1.29
VMP1-213ENST00000591877 ITGAMP11215 1152 aa7.01□□□□□ -1.29
VMP1-213ENST00000591877 SAT1P21673 171 aa7.01□□□□□ -1.29
VMP1-213ENST00000591877 CXCR2P25025 360 aa7.01□□□□□ -1.29
VMP1-213ENST00000591877 SSTR1P30872 391 aa7.01□□□□□ -1.29
VMP1-213ENST00000591877 PAFAH1B1P43034 410 aa7.01□□□□□ -1.29
VMP1-213ENST00000591877 TSFMP43897 325 aaKnown RBP7.01□□□□□ -1.29
VMP1-213ENST00000591877 XCR1P46094 333 aa7.01□□□□□ -1.29
VMP1-213ENST00000591877 CCR8P51685 355 aa7.01□□□□□ -1.29
VMP1-213ENST00000591877 CLNS1AP54105 237 aaKnown RBP7.01□□□□□ -1.29
VMP1-213ENST00000591877 ZNF169Q14929 603 aaPredicted RBP7.01□□□□□ -1.29
VMP1-213ENST00000591877 C18orf21Q32NC0 220 aaPredicted RBP7.01□□□□□ -1.29
VMP1-213ENST00000591877 CLEC9AQ6UXN8 241 aa7.01□□□□□ -1.29
VMP1-213ENST00000591877 Q6ZRM9 215 aa7.01□□□□□ -1.29
VMP1-213ENST00000591877 ZBED8Q8IZ13 594 aa7.01□□□□□ -1.29
VMP1-213ENST00000591877 ZNF808Q8N4W9 903 aaPredicted RBP7.01□□□□□ -1.29
VMP1-213ENST00000591877 SIRT6Q8N6T7 355 aa7.01□□□□□ -1.29
VMP1-213ENST00000591877 CAMKVQ8NCB2 501 aa7.01□□□□□ -1.29
VMP1-213ENST00000591877 SPATA4Q8NEY3 305 aa7.01□□□□□ -1.29
VMP1-213ENST00000591877 OR5T3Q8NGG3 340 aa7.01□□□□□ -1.29
VMP1-213ENST00000591877 SLC2A12Q8TD20 617 aa7.01□□□□□ -1.29
VMP1-213ENST00000591877 ADAMTS15Q8TE58 950 aa7.01□□□□□ -1.29
VMP1-213ENST00000591877 SSC4DQ8WTU2 575 aa7.01□□□□□ -1.29
VMP1-213ENST00000591877 SLC13A3Q8WWT9 602 aa7.01□□□□□ -1.29
VMP1-213ENST00000591877 TMEM125Q96AQ2 219 aa7.01□□□□□ -1.29
VMP1-213ENST00000591877 KTI12Q96EK9 354 aaPredicted RBP7.01□□□□□ -1.29
VMP1-213ENST00000591877 VPS50Q96JG6 964 aa7.01□□□□□ -1.29
VMP1-213ENST00000591877 CNDP1Q96KN2 507 aa7.01□□□□□ -1.29
VMP1-213ENST00000591877 HAUS8Q9BT25 410 aa7.01□□□□□ -1.29
VMP1-213ENST00000591877 SLC29A3Q9BZD2 475 aa7.01□□□□□ -1.29
VMP1-213ENST00000591877 AMBRA1Q9C0C7 1298 aa7.01□□□□□ -1.29
VMP1-213ENST00000591877 AICDAQ9GZX7 198 aa7.01□□□□□ -1.29
VMP1-213ENST00000591877 DPH5Q9H2P9 285 aa7.01□□□□□ -1.29
VMP1-213ENST00000591877 CAB39LQ9H9S4 337 aa7.01□□□□□ -1.29
VMP1-213ENST00000591877 RNF14Q9UBS8 474 aa7.01□□□□□ -1.29
VMP1-213ENST00000591877 NKX1-2Q9UD57 310 aaPredicted RBP7.01□□□□□ -1.29
VMP1-213ENST00000591877 ERRFI1Q9UJM3 462 aaPredicted RBP7.01□□□□□ -1.29
VMP1-213ENST00000591877 NAALAD2Q9Y3Q0 740 aa7.01□□□□□ -1.29
VMP1-213ENST00000591877 TSC22D4Q9Y3Q8 395 aa7.01□□□□□ -1.29
VMP1-213ENST00000591877 NOX1Q9Y5S8 564 aa7.01□□□□□ -1.29
VMP1-213ENST00000591877 SLC22A7Q9Y694 548 aa7.01□□□□□ -1.29
VMP1-213ENST00000591877 ANKUB1A6NFN9 424 aa7□□□□□ -1.29
VMP1-213ENST00000591877 WIPF3A6NGB9 483 aa7□□□□□ -1.29
VMP1-213ENST00000591877 MBD3L5A6NJ08 208 aaPredicted RBP7□□□□□ -1.29
VMP1-213ENST00000591877 RNASET2O00584 256 aaKnown RBP7□□□□□ -1.29
VMP1-213ENST00000591877 OR1F1O43749 312 aa7□□□□□ -1.29
VMP1-213ENST00000591877 GALR3O60755 368 aaPredicted RBP7□□□□□ -1.29
VMP1-213ENST00000591877 F10P00742 488 aa7□□□□□ -1.29
VMP1-213ENST00000591877 C8orf89P0DMQ9 161 aa7□□□□□ -1.29
VMP1-213ENST00000591877 SMIM10L1P0DMW3 83 aa7□□□□□ -1.29
VMP1-213ENST00000591877 GSTM5P46439 218 aa7□□□□□ -1.29
VMP1-213ENST00000591877 TNFSF10P50591 281 aa7□□□□□ -1.29
VMP1-213ENST00000591877 GPX6P59796 221 aa7□□□□□ -1.29
VMP1-213ENST00000591877 DCAF7P61962 342 aa7□□□□□ -1.29
VMP1-213ENST00000591877 OLR1P78380 273 aa7□□□□□ -1.29
VMP1-213ENST00000591877 REEP5Q00765 189 aa7□□□□□ -1.29
VMP1-213ENST00000591877 RHAGQ02094 409 aa7□□□□□ -1.29
VMP1-213ENST00000591877 C2orf54Q08AI8 447 aa7□□□□□ -1.29
VMP1-213ENST00000591877 CDC16Q13042 620 aa7□□□□□ -1.29
VMP1-213ENST00000591877 TRADDQ15628 312 aa7□□□□□ -1.29
VMP1-213ENST00000591877 BAK1Q16611 211 aa7□□□□□ -1.29
VMP1-213ENST00000591877 DEPDC1Q5TB30 811 aa7□□□□□ -1.29
VMP1-213ENST00000591877 IRAK1BP1Q5VVH5 260 aa7□□□□□ -1.29
VMP1-213ENST00000591877 FAM90A2PQ658T7 463 aa7□□□□□ -1.29
VMP1-213ENST00000591877 ZNF324BQ6AW86 544 aaPredicted RBP7□□□□□ -1.29
VMP1-213ENST00000591877 RPUSD3Q6P087 351 aaKnown RBP7□□□□□ -1.29
VMP1-213ENST00000591877 Q6ZSN1 163 aa7□□□□□ -1.29
VMP1-213ENST00000591877 CPEB2Q7Z5Q1 589 aaKnown RBP7□□□□□ -1.29
VMP1-213ENST00000591877 ANKRD37Q7Z713 158 aa7□□□□□ -1.29
VMP1-213ENST00000591877 THOC6Q86W42 341 aaKnown RBP7□□□□□ -1.29
VMP1-213ENST00000591877 SPATA6LQ8N4H0 392 aa7□□□□□ -1.29
VMP1-213ENST00000591877 ST6GALNAC3Q8NDV1 305 aa7□□□□□ -1.29
VMP1-213ENST00000591877 KIF18AQ8NI77 898 aa7□□□□□ -1.29
VMP1-213ENST00000591877 NT5CQ8TCD5 201 aa7□□□□□ -1.29
VMP1-213ENST00000591877 ADAMTS18Q8TE60 1221 aa7□□□□□ -1.29
VMP1-213ENST00000591877 GRHL3Q8TE85 626 aa7□□□□□ -1.29
VMP1-213ENST00000591877 FAR1Q8WVX9 515 aa7□□□□□ -1.29
VMP1-213ENST00000591877 SLC5A11Q8WWX8 675 aa7□□□□□ -1.29
VMP1-213ENST00000591877 ATL1Q8WXF7 558 aa7□□□□□ -1.29
VMP1-213ENST00000591877 ANKRD7Q92527 254 aa7□□□□□ -1.29
VMP1-213ENST00000591877 HAS2Q92819 552 aa7□□□□□ -1.29
VMP1-213ENST00000591877 TSLPQ969D9 159 aa7□□□□□ -1.29
VMP1-213ENST00000591877 RHBDF1Q96CC6 855 aa7□□□□□ -1.29
VMP1-213ENST00000591877 SMIM10Q96HG1 83 aa7□□□□□ -1.29
VMP1-213ENST00000591877 VPS39Q96JC1 886 aa7□□□□□ -1.29
VMP1-213ENST00000591877 TSNARE1Q96NA8 513 aa7□□□□□ -1.29
VMP1-213ENST00000591877 TAAR6Q96RI8 345 aa7□□□□□ -1.29
VMP1-213ENST00000591877 NPAS2Q99743 824 aa7□□□□□ -1.29
VMP1-213ENST00000591877 ERP44Q9BS26 406 aa7□□□□□ -1.29
VMP1-213ENST00000591877 TUBB6Q9BUF5 446 aa7□□□□□ -1.29
VMP1-213ENST00000591877 PAIP1Q9H074 479 aaKnown RBP7□□□□□ -1.29
VMP1-213ENST00000591877 RHOJQ9H4E5 214 aa7□□□□□ -1.29
VMP1-213ENST00000591877 ANKHQ9HCJ1 492 aa7□□□□□ -1.29
VMP1-213ENST00000591877 PLEKHB1Q9UF11 243 aaPredicted RBP7□□□□□ -1.29
VMP1-213ENST00000591877 BAG5Q9UL15 447 aa7□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms