RNA–Protein interactions for RNA: ENST00000591239.1

DNMT1-223, Transcript of DNA methyltransferase 1, humanhuman

TSL 2

Gene DNMT1, Length 550 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-223ENST00000591239 SEC23IPQ9Y6Y8 1000 aaKnown RBP8.45□□□□□ -1.06
DNMT1-223ENST00000591239 CELSR2Q9HCU4 2923 aa8.45□□□□□ -1.06
DNMT1-223ENST00000591239 DIDO1Q9BTC0 2240 aaKnown RBP8.45□□□□□ -1.06
DNMT1-223ENST00000591239 ADGRG4Q8IZF6 3080 aa8.45□□□□□ -1.06
DNMT1-223ENST00000591239 SPTBN1Q01082 2364 aaKnown RBP8.44□□□□□ -1.06
DNMT1-223ENST00000591239 A0A1B0GTH9 108 aa8.44□□□□□ -1.06
DNMT1-223ENST00000591239 ANKRD33BA6NCL7 494 aa8.44□□□□□ -1.06
DNMT1-223ENST00000591239 FRG2CA6NGY1 282 aa8.44□□□□□ -1.06
DNMT1-223ENST00000591239 UPK1AO00322 258 aa8.44□□□□□ -1.06
DNMT1-223ENST00000591239 CCL21O00585 134 aa8.44□□□□□ -1.06
DNMT1-223ENST00000591239 TO15178 435 aa8.44□□□□□ -1.06
DNMT1-223ENST00000591239 PDPK1O15530 556 aa8.44□□□□□ -1.06
DNMT1-223ENST00000591239 COQ9O75208 318 aa8.44□□□□□ -1.06
DNMT1-223ENST00000591239 ERN1O75460 977 aaKnown RBP8.44□□□□□ -1.06
DNMT1-223ENST00000591239 PPM1BO75688 479 aa8.44□□□□□ -1.06
DNMT1-223ENST00000591239 CT45A8P0DMV1 189 aa8.44□□□□□ -1.06
DNMT1-223ENST00000591239 CT45A9P0DMV2 189 aa8.44□□□□□ -1.06
DNMT1-223ENST00000591239 PRPS2P11908 318 aa8.44□□□□□ -1.06
DNMT1-223ENST00000591239 ABOP16442 354 aa8.44□□□□□ -1.06
DNMT1-223ENST00000591239 FRKP42685 505 aaPredicted RBP8.44□□□□□ -1.06
DNMT1-223ENST00000591239 MAGEA5P43359 124 aa8.44□□□□□ -1.06
DNMT1-223ENST00000591239 RPL14P50914 215 aaKnown RBP8.44□□□□□ -1.06
DNMT1-223ENST00000591239 MANFP55145 182 aaKnown RBP8.44□□□□□ -1.06
DNMT1-223ENST00000591239 CASP6P55212 293 aa8.44□□□□□ -1.06
DNMT1-223ENST00000591239 PER3P56645 1201 aa8.44□□□□□ -1.06
DNMT1-223ENST00000591239 CORO7P57737 925 aa8.44□□□□□ -1.06
DNMT1-223ENST00000591239 RPP38P78345 283 aaKnown RBP8.44□□□□□ -1.06
DNMT1-223ENST00000591239 PLCXD2Q0VAA5 305 aa8.44□□□□□ -1.06
DNMT1-223ENST00000591239 BST1Q10588 318 aa8.44□□□□□ -1.06
DNMT1-223ENST00000591239 HSPB3Q12988 150 aa8.44□□□□□ -1.06
DNMT1-223ENST00000591239 PDE7AQ13946 482 aa8.44□□□□□ -1.06
DNMT1-223ENST00000591239 PDCD2Q16342 344 aaPredicted RBP8.44□□□□□ -1.06
DNMT1-223ENST00000591239 C3AR1Q16581 482 aa8.44□□□□□ -1.06
DNMT1-223ENST00000591239 HYAL4Q2M3T9 481 aa8.44□□□□□ -1.06
DNMT1-223ENST00000591239 CT45A2Q5DJT8 189 aa8.44□□□□□ -1.06
DNMT1-223ENST00000591239 TBCELQ5QJ74 424 aa8.44□□□□□ -1.06
DNMT1-223ENST00000591239 IL23RQ5VWK5 629 aa8.44□□□□□ -1.06
DNMT1-223ENST00000591239 BICRALQ6AI39 1079 aa8.44□□□□□ -1.06
DNMT1-223ENST00000591239 ZNF551Q7Z340 670 aaPredicted RBP8.44□□□□□ -1.06
DNMT1-223ENST00000591239 R3HCC1LQ7Z5L2 792 aaKnown RBP8.44□□□□□ -1.06
DNMT1-223ENST00000591239 FGD2Q7Z6J4 655 aa8.44□□□□□ -1.06
DNMT1-223ENST00000591239 KIRREL3Q8IZU9 778 aa8.44□□□□□ -1.06
DNMT1-223ENST00000591239 OR2L13Q8N349 312 aa8.44□□□□□ -1.06
DNMT1-223ENST00000591239 TMEM251Q8N6I4 163 aa8.44□□□□□ -1.06
DNMT1-223ENST00000591239 SPPL2AQ8TCT8 520 aa8.44□□□□□ -1.06
DNMT1-223ENST00000591239 CIDECQ96AQ7 238 aaPredicted RBP8.44□□□□□ -1.06
DNMT1-223ENST00000591239 MTERF3Q96E29 417 aa8.44□□□□□ -1.06
DNMT1-223ENST00000591239 OMA1Q96E52 524 aa8.44□□□□□ -1.06
DNMT1-223ENST00000591239 ELP4Q96EB1 424 aa8.44□□□□□ -1.06
DNMT1-223ENST00000591239 ZBED6CLQ96FA7 236 aaPredicted RBP8.44□□□□□ -1.06
DNMT1-223ENST00000591239 PPP1R36Q96LQ0 422 aa8.44□□□□□ -1.06
DNMT1-223ENST00000591239 RILPQ96NA2 401 aa8.44□□□□□ -1.06
DNMT1-223ENST00000591239 DOHHQ9BU89 302 aa8.44□□□□□ -1.06
DNMT1-223ENST00000591239 C1orf50Q9BV19 199 aa8.44□□□□□ -1.06
DNMT1-223ENST00000591239 FOLH1BQ9HBA9 442 aa8.44□□□□□ -1.06
DNMT1-223ENST00000591239 ZFP64Q9NPA5 681 aa8.44□□□□□ -1.06
DNMT1-223ENST00000591239 PLSCR2Q9NRY7 297 aa8.44□□□□□ -1.06
DNMT1-223ENST00000591239 DDX18Q9NVP1 670 aaKnown RBP8.44□□□□□ -1.06
DNMT1-223ENST00000591239 NKIRAS1Q9NYS0 192 aa8.44□□□□□ -1.06
DNMT1-223ENST00000591239 SH3BGRL2Q9UJC5 107 aa8.44□□□□□ -1.06
DNMT1-223ENST00000591239 HAO1Q9UJM8 370 aa8.44□□□□□ -1.06
DNMT1-223ENST00000591239 TINAGQ9UJW2 476 aa8.44□□□□□ -1.06
DNMT1-223ENST00000591239 BOKQ9UMX3 212 aaPredicted RBP8.44□□□□□ -1.06
DNMT1-223ENST00000591239 C19orf53Q9UNZ5 99 aaPredicted RBP8.44□□□□□ -1.06
DNMT1-223ENST00000591239 NBPF19A0A087WUL8 3843 aa8.44□□□□□ -1.06
DNMT1-223ENST00000591239 GTF3C1Q12789 2109 aa8.44□□□□□ -1.06
DNMT1-223ENST00000591239 MYO7BQ6PIF6 2116 aa8.44□□□□□ -1.06
DNMT1-223ENST00000591239 ICE1Q9Y2F5 2266 aa8.43□□□□□ -1.06
DNMT1-223ENST00000591239 NINQ8N4C6 2090 aa8.43□□□□□ -1.06
DNMT1-223ENST00000591239 LRRC3CA6NJW4 275 aa8.43□□□□□ -1.06
DNMT1-223ENST00000591239 PRRG2O14669 202 aa8.43□□□□□ -1.06
DNMT1-223ENST00000591239 SCAMP2O15127 329 aaKnown RBP8.43□□□□□ -1.06
DNMT1-223ENST00000591239 ZG16O60844 167 aa8.43□□□□□ -1.06
DNMT1-223ENST00000591239 UGT2B11O75310 529 aa8.43□□□□□ -1.06
DNMT1-223ENST00000591239 TRIM3O75382 744 aaPredicted RBP8.43□□□□□ -1.06
DNMT1-223ENST00000591239 SNX4O95219 450 aa8.43□□□□□ -1.06
DNMT1-223ENST00000591239 PSMG1O95456 288 aa8.43□□□□□ -1.06
DNMT1-223ENST00000591239 IFI6P09912 130 aa8.43□□□□□ -1.06
DNMT1-223ENST00000591239 RFPL3SP0C7P2 107 aa8.43□□□□□ -1.06
DNMT1-223ENST00000591239 DDX5P17844 614 aaKnown RBP8.43□□□□□ -1.06
DNMT1-223ENST00000591239 PTGS2P35354 604 aa8.43□□□□□ -1.06
DNMT1-223ENST00000591239 HPCAL1P37235 193 aa8.43□□□□□ -1.06
DNMT1-223ENST00000591239 RPL3P39023 403 aaKnown RBP8.43□□□□□ -1.06
DNMT1-223ENST00000591239 CASP3P42574 277 aa8.43□□□□□ -1.06
DNMT1-223ENST00000591239 EMX2Q04743 252 aa8.43□□□□□ -1.06
DNMT1-223ENST00000591239 ZNF155Q12901 538 aaPredicted RBP8.43□□□□□ -1.06
DNMT1-223ENST00000591239 MAD2L1Q13257 205 aaPredicted RBP8.43□□□□□ -1.06
DNMT1-223ENST00000591239 PTGR1Q14914 329 aa8.43□□□□□ -1.06
DNMT1-223ENST00000591239 SLC10A1Q14973 349 aa8.43□□□□□ -1.06
DNMT1-223ENST00000591239 SMU1Q2TAY7 513 aa8.43□□□□□ -1.06
DNMT1-223ENST00000591239 AGBL2Q5U5Z8 902 aa8.43□□□□□ -1.06
DNMT1-223ENST00000591239 TMEM198Q66K66 360 aa8.43□□□□□ -1.06
DNMT1-223ENST00000591239 DESI1Q6ICB0 168 aa8.43□□□□□ -1.06
DNMT1-223ENST00000591239 ARHGAP11AQ6P4F7 1023 aa8.43□□□□□ -1.06
DNMT1-223ENST00000591239 PAOXQ6QHF9 649 aa8.43□□□□□ -1.06
DNMT1-223ENST00000591239 NPSR1Q6W5P4 371 aa8.43□□□□□ -1.06
DNMT1-223ENST00000591239 NUP54Q7Z3B4 507 aa8.43□□□□□ -1.06
DNMT1-223ENST00000591239 PACS2Q86VP3 889 aa8.43□□□□□ -1.06
DNMT1-223ENST00000591239 DOLPP1Q86YN1 238 aa8.43□□□□□ -1.06
DNMT1-223ENST00000591239 SLC44A2Q8IWA5 706 aaPredicted RBP8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms