RNA–Protein interactions for RNA: ENST00000582448.5

SS18-221, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 5

Gene SS18, Length 585 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-221ENST00000582448 PPP1R14AQ96A00 147 aa9.6□□□□□ -0.87
SS18-221ENST00000582448 PPCDCQ96CD2 204 aa9.6□□□□□ -0.87
SS18-221ENST00000582448 PPM1MQ96MI6 270 aa9.6□□□□□ -0.87
SS18-221ENST00000582448 PANX1Q96RD7 426 aa9.6□□□□□ -0.87
SS18-221ENST00000582448 MAP3K3Q99759 626 aa9.6□□□□□ -0.87
SS18-221ENST00000582448 SLC39A3Q9BRY0 314 aa9.6□□□□□ -0.87
SS18-221ENST00000582448 DUSP26Q9BV47 211 aa9.6□□□□□ -0.87
SS18-221ENST00000582448 NUDT9Q9BW91 350 aa9.6□□□□□ -0.87
SS18-221ENST00000582448 MS4A8Q9BY19 250 aa9.6□□□□□ -0.87
SS18-221ENST00000582448 ROGDIQ9GZN7 287 aa9.6□□□□□ -0.87
SS18-221ENST00000582448 SPNS1Q9H2V7 528 aa9.6□□□□□ -0.87
SS18-221ENST00000582448 REEP4Q9H6H4 257 aa9.6□□□□□ -0.87
SS18-221ENST00000582448 S100A14Q9HCY8 104 aa9.6□□□□□ -0.87
SS18-221ENST00000582448 MYNNQ9NPC7 610 aa9.6□□□□□ -0.87
SS18-221ENST00000582448 ADAM29Q9UKF5 820 aa9.6□□□□□ -0.87
SS18-221ENST00000582448 CORO2BQ9UQ03 480 aa9.6□□□□□ -0.87
SS18-221ENST00000582448 AP1M2Q9Y6Q5 423 aa9.6□□□□□ -0.87
SS18-221ENST00000582448 PRSS51A0A1B0GVH4 220 aa9.59□□□□□ -0.87
SS18-221ENST00000582448 ASPDHA6ND91 283 aa9.59□□□□□ -0.87
SS18-221ENST00000582448 PRORSD1PA6NEY8 169 aa9.59□□□□□ -0.87
SS18-221ENST00000582448 URADA6NGE7 173 aa9.59□□□□□ -0.87
SS18-221ENST00000582448 FXYD1O00168 92 aa9.59□□□□□ -0.87
SS18-221ENST00000582448 NME4O00746 187 aa9.59□□□□□ -0.87
SS18-221ENST00000582448 PRICKLE3O43900 615 aaPredicted RBP9.59□□□□□ -0.87
SS18-221ENST00000582448 SCRG1O75711 98 aa9.59□□□□□ -0.87
SS18-221ENST00000582448 LDLRP01130 860 aa9.59□□□□□ -0.87
SS18-221ENST00000582448 KLK3P07288 261 aaPredicted RBP9.59□□□□□ -0.87
SS18-221ENST00000582448 SLC35G6P0C7Q6 338 aa9.59□□□□□ -0.87
SS18-221ENST00000582448 GLI4P10075 376 aa9.59□□□□□ -0.87
SS18-221ENST00000582448 ANPEPP15144 967 aa9.59□□□□□ -0.87
SS18-221ENST00000582448 POLR2CP19387 275 aaPredicted RBP9.59□□□□□ -0.87
SS18-221ENST00000582448 ZNF10P21506 573 aaPredicted RBP9.59□□□□□ -0.87
SS18-221ENST00000582448 PPIBP23284 216 aaKnown RBP9.59□□□□□ -0.87
SS18-221ENST00000582448 SSR2P43308 183 aa9.59□□□□□ -0.87
SS18-221ENST00000582448 TSFMP43897 325 aaKnown RBP9.59□□□□□ -0.87
SS18-221ENST00000582448 CAPZBP47756 277 aa9.59□□□□□ -0.87
SS18-221ENST00000582448 TRA2BP62995 288 aaKnown RBP9.59□□□□□ -0.87
SS18-221ENST00000582448 PLIN5Q00G26 463 aa9.59□□□□□ -0.87
SS18-221ENST00000582448 RGS1Q08116 209 aa9.59□□□□□ -0.87
SS18-221ENST00000582448 C2orf80Q0P641 193 aa9.59□□□□□ -0.87
SS18-221ENST00000582448 RABL3Q5HYI8 236 aa9.59□□□□□ -0.87
SS18-221ENST00000582448 LCE1DQ5T752 114 aa9.59□□□□□ -0.87
SS18-221ENST00000582448 PRAMEF17Q5VTA0 474 aa9.59□□□□□ -0.87
SS18-221ENST00000582448 TRIM40Q6P9F5 258 aa9.59□□□□□ -0.87
SS18-221ENST00000582448 IFNEQ86WN2 208 aa9.59□□□□□ -0.87
SS18-221ENST00000582448 ADGRF3Q8IZF5 1079 aa9.59□□□□□ -0.87
SS18-221ENST00000582448 TRIML2Q8N7C3 387 aa9.59□□□□□ -0.87
SS18-221ENST00000582448 RBMXL3Q8N7X1 1067 aaKnown RBP9.59□□□□□ -0.87
SS18-221ENST00000582448 MFSD9Q8NBP5 474 aa9.59□□□□□ -0.87
SS18-221ENST00000582448 C16orf78Q8WTQ4 265 aa9.59□□□□□ -0.87
SS18-221ENST00000582448 RERGQ96A58 199 aaPredicted RBP9.59□□□□□ -0.87
SS18-221ENST00000582448 ZUFSPQ96AP4 578 aa9.59□□□□□ -0.87
SS18-221ENST00000582448 TMEM125Q96AQ2 219 aa9.59□□□□□ -0.87
SS18-221ENST00000582448 SNRNP40Q96DI7 357 aaKnown RBP9.59□□□□□ -0.87
SS18-221ENST00000582448 C11orf24Q96F05 449 aaPredicted RBP9.59□□□□□ -0.87
SS18-221ENST00000582448 C5orf34Q96MH7 638 aa9.59□□□□□ -0.87
SS18-221ENST00000582448 ANKRD27Q96NW4 1050 aa9.59□□□□□ -0.87
SS18-221ENST00000582448 F2RL3Q96RI0 385 aa9.59□□□□□ -0.87
SS18-221ENST00000582448 FAIM2Q9BWQ8 316 aa9.59□□□□□ -0.87
SS18-221ENST00000582448 NLNQ9BYT8 704 aa9.59□□□□□ -0.87
SS18-221ENST00000582448 REXO4Q9GZR2 422 aaKnown RBP9.59□□□□□ -0.87
SS18-221ENST00000582448 CHST8Q9H2A9 424 aa9.59□□□□□ -0.87
SS18-221ENST00000582448 COPS7BQ9H9Q2 264 aaPredicted RBP9.59□□□□□ -0.87
SS18-221ENST00000582448 SLC6A20Q9NP91 592 aa9.59□□□□□ -0.87
SS18-221ENST00000582448 FGF21Q9NSA1 209 aa9.59□□□□□ -0.87
SS18-221ENST00000582448 HRASLS2Q9NWW9 162 aa9.59□□□□□ -0.87
SS18-221ENST00000582448 CMTM6Q9NX76 183 aa9.59□□□□□ -0.87
SS18-221ENST00000582448 SPHK1Q9NYA1 384 aa9.59□□□□□ -0.87
SS18-221ENST00000582448 SH3BP4Q9P0V3 963 aa9.59□□□□□ -0.87
SS18-221ENST00000582448 CD300AQ9UGN4 299 aa9.59□□□□□ -0.87
SS18-221ENST00000582448 MAGEL2Q9UJ55 1249 aa9.59□□□□□ -0.87
SS18-221ENST00000582448 PACSIN3Q9UKS6 424 aa9.59□□□□□ -0.87
SS18-221ENST00000582448 PCDHA9Q9Y5H5 950 aa9.59□□□□□ -0.87
SS18-221ENST00000582448 SNX13Q9Y5W8 968 aa9.59□□□□□ -0.87
SS18-221ENST00000582448 MYO9AB2RTY4 2548 aa9.58□□□□□ -0.88
SS18-221ENST00000582448 C7orf72A4D263 438 aa9.58□□□□□ -0.88
SS18-221ENST00000582448 AQP12BA6NM10 295 aa9.58□□□□□ -0.88
SS18-221ENST00000582448 BTN3A3O00478 584 aa9.58□□□□□ -0.88
SS18-221ENST00000582448 HAT1O14929 419 aa9.58□□□□□ -0.88
SS18-221ENST00000582448 CPSF4O95639 269 aaKnown RBP9.58□□□□□ -0.88
SS18-221ENST00000582448 THBDP07204 575 aa9.58□□□□□ -0.88
SS18-221ENST00000582448 NAT2P11245 290 aa9.58□□□□□ -0.88
SS18-221ENST00000582448 UGT2B7P16662 529 aa9.58□□□□□ -0.88
SS18-221ENST00000582448 DNAJA1P31689 397 aaKnown RBP9.58□□□□□ -0.88
SS18-221ENST00000582448 MSX2P35548 267 aaPredicted RBP9.58□□□□□ -0.88
SS18-221ENST00000582448 VHLP40337 213 aa9.58□□□□□ -0.88
SS18-221ENST00000582448 GSK3BP49841 420 aa9.58□□□□□ -0.88
SS18-221ENST00000582448 TAS2R50P59544 299 aa9.58□□□□□ -0.88
SS18-221ENST00000582448 RAE1P78406 368 aaKnown RBP9.58□□□□□ -0.88
SS18-221ENST00000582448 GPR19Q15760 415 aa9.58□□□□□ -0.88
SS18-221ENST00000582448 C1QL3Q5VWW1 255 aa9.58□□□□□ -0.88
SS18-221ENST00000582448 OR4C11Q6IEV9 310 aa9.58□□□□□ -0.88
SS18-221ENST00000582448 OR4F3Q6IEY1 312 aa9.58□□□□□ -0.88
SS18-221ENST00000582448 LCN10Q6JVE6 187 aa9.58□□□□□ -0.88
SS18-221ENST00000582448 DLEU7Q6UYE1 221 aa9.58□□□□□ -0.88
SS18-221ENST00000582448 ZNF621Q6ZSS3 439 aa9.58□□□□□ -0.88
SS18-221ENST00000582448 CAMKMTQ7Z624 323 aa9.58□□□□□ -0.88
SS18-221ENST00000582448 PLD3Q8IV08 490 aa9.58□□□□□ -0.88
SS18-221ENST00000582448 AQP12AQ8IXF9 295 aa9.58□□□□□ -0.88
SS18-221ENST00000582448 ANKRD53Q8N9V6 530 aa9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms