RNA–Protein interactions for RNA: ENST00000569916.1

CNOT1-220, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 3

Gene CNOT1, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-220ENST00000569916 ITM2AO43736 263 aa11.95□□□□□ -0.5
CNOT1-220ENST00000569916 TBX19O60806 448 aa11.95□□□□□ -0.5
CNOT1-220ENST00000569916 ERN1O75460 977 aaKnown RBP11.95□□□□□ -0.5
CNOT1-220ENST00000569916 SKAP2O75563 359 aaPredicted RBP11.95□□□□□ -0.5
CNOT1-220ENST00000569916 LYPLA1O75608 230 aaPredicted RBP11.95□□□□□ -0.5
CNOT1-220ENST00000569916 ATP6AP2O75787 350 aa11.95□□□□□ -0.5
CNOT1-220ENST00000569916 SLITRK5O94991 958 aa11.95□□□□□ -0.5
CNOT1-220ENST00000569916 SERPINE1P05121 402 aa11.95□□□□□ -0.5
CNOT1-220ENST00000569916 CT45A8P0DMV1 189 aa11.95□□□□□ -0.5
CNOT1-220ENST00000569916 CT45A9P0DMV2 189 aa11.95□□□□□ -0.5
CNOT1-220ENST00000569916 MC3RP41968 323 aa11.95□□□□□ -0.5
CNOT1-220ENST00000569916 CASP3P42574 277 aa11.95□□□□□ -0.5
CNOT1-220ENST00000569916 CORO7P57737 925 aa11.95□□□□□ -0.5
CNOT1-220ENST00000569916 PLCXD2Q0VAA5 305 aa11.95□□□□□ -0.5
CNOT1-220ENST00000569916 PDE7AQ13946 482 aa11.95□□□□□ -0.5
CNOT1-220ENST00000569916 ZNF385BQ569K4 471 aa11.95□□□□□ -0.5
CNOT1-220ENST00000569916 CT45A2Q5DJT8 189 aa11.95□□□□□ -0.5
CNOT1-220ENST00000569916 EMC4Q5J8M3 183 aa11.95□□□□□ -0.5
CNOT1-220ENST00000569916 DESI1Q6ICB0 168 aa11.95□□□□□ -0.5
CNOT1-220ENST00000569916 ANKRD26P1Q6NSI1 321 aa11.95□□□□□ -0.5
CNOT1-220ENST00000569916 TMEM107Q6UX40 140 aa11.95□□□□□ -0.5
CNOT1-220ENST00000569916 NPSR1Q6W5P4 371 aa11.95□□□□□ -0.5
CNOT1-220ENST00000569916 RPTNQ6XPR3 784 aa11.95□□□□□ -0.5
CNOT1-220ENST00000569916 C3P1Q6ZMU1 363 aa11.95□□□□□ -0.5
CNOT1-220ENST00000569916 TRILQ7L0X0 811 aa11.95□□□□□ -0.5
CNOT1-220ENST00000569916 MRGPRGQ86SM5 289 aa11.95□□□□□ -0.5
CNOT1-220ENST00000569916 CROCCP2Q86T23 111 aa11.95□□□□□ -0.5
CNOT1-220ENST00000569916 SLC34A3Q8N130 599 aa11.95□□□□□ -0.5
CNOT1-220ENST00000569916 ZNF808Q8N4W9 903 aaPredicted RBP11.95□□□□□ -0.5
CNOT1-220ENST00000569916 CLHC1Q8NHS4 586 aa11.95□□□□□ -0.5
CNOT1-220ENST00000569916 PHF10Q8WUB8 498 aaKnown RBP11.95□□□□□ -0.5
CNOT1-220ENST00000569916 GFM2Q969S9 779 aaKnown RBP11.95□□□□□ -0.5
CNOT1-220ENST00000569916 ZNF597Q96LX8 424 aa11.95□□□□□ -0.5
CNOT1-220ENST00000569916 C3orf30Q96M34 536 aa11.95□□□□□ -0.5
CNOT1-220ENST00000569916 AMDHD1Q96NU7 426 aa11.95□□□□□ -0.5
CNOT1-220ENST00000569916 DMRTA2Q96SC8 542 aa11.95□□□□□ -0.5
CNOT1-220ENST00000569916 ANGPTL4Q9BY76 406 aa11.95□□□□□ -0.5
CNOT1-220ENST00000569916 HRH3Q9Y5N1 445 aa11.95□□□□□ -0.5
CNOT1-220ENST00000569916 A0A087WV62 115 aa11.94□□□□□ -0.5
CNOT1-220ENST00000569916 TMEM114B3SHH9 223 aa11.94□□□□□ -0.5
CNOT1-220ENST00000569916 E9PLN8 166 aa11.94□□□□□ -0.5
CNOT1-220ENST00000569916 PLOD2O00469 737 aa11.94□□□□□ -0.5
CNOT1-220ENST00000569916 AQP7O14520 342 aa11.94□□□□□ -0.5
CNOT1-220ENST00000569916 BIRC5O15392 142 aa11.94□□□□□ -0.5
CNOT1-220ENST00000569916 PDPK1O15530 556 aa11.94□□□□□ -0.5
CNOT1-220ENST00000569916 AKAP10O43572 662 aa11.94□□□□□ -0.5
CNOT1-220ENST00000569916 COQ9O75208 318 aa11.94□□□□□ -0.5
CNOT1-220ENST00000569916 UGT2B11O75310 529 aa11.94□□□□□ -0.5
CNOT1-220ENST00000569916 SNX4O95219 450 aa11.94□□□□□ -0.5
CNOT1-220ENST00000569916 ZWINTO95229 277 aa11.94□□□□□ -0.5
CNOT1-220ENST00000569916 PSMG1O95456 288 aa11.94□□□□□ -0.5
CNOT1-220ENST00000569916 HSPA4LO95757 839 aa11.94□□□□□ -0.5
CNOT1-220ENST00000569916 IFI6P09912 130 aa11.94□□□□□ -0.5
CNOT1-220ENST00000569916 BCKDHAP12694 445 aa11.94□□□□□ -0.5
CNOT1-220ENST00000569916 ENDOUP21128 410 aaKnown RBP11.94□□□□□ -0.5
CNOT1-220ENST00000569916 PTGDSP41222 190 aa11.94□□□□□ -0.5
CNOT1-220ENST00000569916 RPP38P78345 283 aaKnown RBP11.94□□□□□ -0.5
CNOT1-220ENST00000569916 SLC10A1Q14973 349 aa11.94□□□□□ -0.5
CNOT1-220ENST00000569916 CHI3L2Q15782 390 aa11.94□□□□□ -0.5
CNOT1-220ENST00000569916 FNDC7Q5VTL7 733 aa11.94□□□□□ -0.5
CNOT1-220ENST00000569916 TMEM198Q66K66 360 aa11.94□□□□□ -0.5
CNOT1-220ENST00000569916 TMEM81Q6P7N7 255 aa11.94□□□□□ -0.5
CNOT1-220ENST00000569916 NUP54Q7Z3B4 507 aa11.94□□□□□ -0.5
CNOT1-220ENST00000569916 OR2L13Q8N349 312 aa11.94□□□□□ -0.5
CNOT1-220ENST00000569916 PPP1R14CQ8TAE6 165 aa11.94□□□□□ -0.5
CNOT1-220ENST00000569916 TMBIM1Q969X1 311 aa11.94□□□□□ -0.5
CNOT1-220ENST00000569916 SLC35A4Q96G79 324 aa11.94□□□□□ -0.5
CNOT1-220ENST00000569916 PPP3R2Q96LZ3 170 aa11.94□□□□□ -0.5
CNOT1-220ENST00000569916 JSRP1Q96MG2 331 aaPredicted RBP11.94□□□□□ -0.5
CNOT1-220ENST00000569916 NODALQ96S42 347 aa11.94□□□□□ -0.5
CNOT1-220ENST00000569916 VKORC1Q9BQB6 163 aa11.94□□□□□ -0.5
CNOT1-220ENST00000569916 REEP4Q9H6H4 257 aa11.94□□□□□ -0.5
CNOT1-220ENST00000569916 ZNF395Q9H8N7 513 aaPredicted RBP11.94□□□□□ -0.5
CNOT1-220ENST00000569916 QPCTLQ9NXS2 382 aa11.94□□□□□ -0.5
CNOT1-220ENST00000569916 TAS2R9Q9NYW1 312 aa11.94□□□□□ -0.5
CNOT1-220ENST00000569916 B4GALT7Q9UBV7 327 aa11.94□□□□□ -0.5
CNOT1-220ENST00000569916 BAIAP2L1Q9UHR4 511 aa11.94□□□□□ -0.5
CNOT1-220ENST00000569916 C19orf53Q9UNZ5 99 aaPredicted RBP11.94□□□□□ -0.5
CNOT1-220ENST00000569916 ARHGAP21Q5T5U3 1957 aa11.93□□□□□ -0.5
CNOT1-220ENST00000569916 OR14I1A6ND48 311 aa11.93□□□□□ -0.5
CNOT1-220ENST00000569916 NPIPA2E9PIF3 369 aa11.93□□□□□ -0.5
CNOT1-220ENST00000569916 NPIPA3F8WFD2 350 aa11.93□□□□□ -0.5
CNOT1-220ENST00000569916 UPK1AO00322 258 aa11.93□□□□□ -0.5
CNOT1-220ENST00000569916 SUSD5O60279 629 aa11.93□□□□□ -0.5
CNOT1-220ENST00000569916 HCN1O60741 890 aa11.93□□□□□ -0.5
CNOT1-220ENST00000569916 PEX11AO75192 247 aa11.93□□□□□ -0.5
CNOT1-220ENST00000569916 ERLIN1O75477 346 aa11.93□□□□□ -0.5
CNOT1-220ENST00000569916 MYZAPP0CAP1 466 aa11.93□□□□□ -0.5
CNOT1-220ENST00000569916 FRKP42685 505 aaPredicted RBP11.93□□□□□ -0.5
CNOT1-220ENST00000569916 ASMTP46597 345 aa11.93□□□□□ -0.5
CNOT1-220ENST00000569916 MAN2A2P49641 1150 aa11.93□□□□□ -0.5
CNOT1-220ENST00000569916 ABCE1P61221 599 aaKnown RBP11.93□□□□□ -0.5
CNOT1-220ENST00000569916 PSG6Q00889 435 aa11.93□□□□□ -0.5
CNOT1-220ENST00000569916 ZNF155Q12901 538 aaPredicted RBP11.93□□□□□ -0.5
CNOT1-220ENST00000569916 HSPB3Q12988 150 aa11.93□□□□□ -0.5
CNOT1-220ENST00000569916 ATP6AP1LQ52LC2 224 aa11.93□□□□□ -0.5
CNOT1-220ENST00000569916 C6orf136Q5SQH8 315 aa11.93□□□□□ -0.5
CNOT1-220ENST00000569916 BEND6Q5SZJ8 279 aaPredicted RBP11.93□□□□□ -0.5
CNOT1-220ENST00000569916 ZNF551Q7Z340 670 aaPredicted RBP11.93□□□□□ -0.5
CNOT1-220ENST00000569916 EID3Q8N140 333 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms