RNA–Protein interactions for RNA: ENST00000560834.1

CTDSPL2-210, Transcript of CTD small phosphatase like 2, humanhuman

TSL 4

Gene CTDSPL2, Length 571 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-210ENST00000560834 DEFB109BQ30KR1 87 aa6.52□□□□□ -1.37
CTDSPL2-210ENST00000560834 TRMT5Q32P41 509 aaKnown RBP6.52□□□□□ -1.37
CTDSPL2-210ENST00000560834 C6orf10Q5SRN2 563 aa6.52□□□□□ -1.37
CTDSPL2-210ENST00000560834 SAXO2Q658L1 398 aa6.52□□□□□ -1.37
CTDSPL2-210ENST00000560834 MFSD12Q6NUT3 480 aa6.52□□□□□ -1.37
CTDSPL2-210ENST00000560834 C8orf82Q6P1X6 216 aaPredicted RBP6.52□□□□□ -1.37
CTDSPL2-210ENST00000560834 DLEU7Q6UYE1 221 aa6.52□□□□□ -1.37
CTDSPL2-210ENST00000560834 NPSR1Q6W5P4 371 aa6.52□□□□□ -1.37
CTDSPL2-210ENST00000560834 TRPM8Q7Z2W7 1104 aa6.52□□□□□ -1.37
CTDSPL2-210ENST00000560834 DHDDSQ86SQ9 333 aa6.52□□□□□ -1.37
CTDSPL2-210ENST00000560834 APLFQ8IW19 511 aaPredicted RBP6.52□□□□□ -1.37
CTDSPL2-210ENST00000560834 ARMC10Q8N2F6 343 aa6.52□□□□□ -1.37
CTDSPL2-210ENST00000560834 ZNF441Q8N8Z8 693 aa6.52□□□□□ -1.37
CTDSPL2-210ENST00000560834 TMEM102Q8N9M5 508 aaPredicted RBP6.52□□□□□ -1.37
CTDSPL2-210ENST00000560834 VPS37AQ8NEZ2 397 aa6.52□□□□□ -1.37
CTDSPL2-210ENST00000560834 NUP43Q8NFH3 380 aa6.52□□□□□ -1.37
CTDSPL2-210ENST00000560834 OR56A1Q8NGH5 318 aa6.52□□□□□ -1.37
CTDSPL2-210ENST00000560834 OR8K3Q8NH51 312 aa6.52□□□□□ -1.37
CTDSPL2-210ENST00000560834 RP9Q8TA86 221 aaKnown RBP6.52□□□□□ -1.37
CTDSPL2-210ENST00000560834 M1APQ8TC57 530 aa6.52□□□□□ -1.37
CTDSPL2-210ENST00000560834 ZFP90Q8TF47 636 aa6.52□□□□□ -1.37
CTDSPL2-210ENST00000560834 PSMF1Q92530 271 aa6.52□□□□□ -1.37
CTDSPL2-210ENST00000560834 MOAP1Q96BY2 351 aa6.52□□□□□ -1.37
CTDSPL2-210ENST00000560834 AURKBQ96GD4 344 aaPredicted RBP6.52□□□□□ -1.37
CTDSPL2-210ENST00000560834 CRELD1Q96HD1 420 aa6.52□□□□□ -1.37
CTDSPL2-210ENST00000560834 VPS50Q96JG6 964 aa6.52□□□□□ -1.37
CTDSPL2-210ENST00000560834 MAGED4Q96JG8 741 aa6.52□□□□□ -1.37
CTDSPL2-210ENST00000560834 HSH2DQ96JZ2 352 aa6.52□□□□□ -1.37
CTDSPL2-210ENST00000560834 FER1L6-AS2Q96M78 137 aa6.52□□□□□ -1.37
CTDSPL2-210ENST00000560834 VSTM2LQ96N03 204 aa6.52□□□□□ -1.37
CTDSPL2-210ENST00000560834 BTBD9Q96Q07 612 aa6.52□□□□□ -1.37
CTDSPL2-210ENST00000560834 NPAS2Q99743 824 aa6.52□□□□□ -1.37
CTDSPL2-210ENST00000560834 CPPED1Q9BRF8 314 aaPredicted RBP6.52□□□□□ -1.37
CTDSPL2-210ENST00000560834 SLC35A5Q9BS91 424 aa6.52□□□□□ -1.37
CTDSPL2-210ENST00000560834 ITPAQ9BY32 194 aa6.52□□□□□ -1.37
CTDSPL2-210ENST00000560834 WWTR1Q9GZV5 400 aa6.52□□□□□ -1.37
CTDSPL2-210ENST00000560834 IKZF5Q9H5V7 419 aa6.52□□□□□ -1.37
CTDSPL2-210ENST00000560834 FOLH1BQ9HBA9 442 aa6.52□□□□□ -1.37
CTDSPL2-210ENST00000560834 ZCCHC3Q9NUD5 404 aaKnown RBP6.52□□□□□ -1.37
CTDSPL2-210ENST00000560834 GPATCH2Q9NW75 528 aa6.52□□□□□ -1.37
CTDSPL2-210ENST00000560834 VAPAQ9P0L0 249 aa6.52□□□□□ -1.37
CTDSPL2-210ENST00000560834 COPS7AQ9UBW8 275 aa6.52□□□□□ -1.37
CTDSPL2-210ENST00000560834 VPS4AQ9UN37 437 aa6.52□□□□□ -1.37
CTDSPL2-210ENST00000560834 NDUFAF1Q9Y375 327 aa6.52□□□□□ -1.37
CTDSPL2-210ENST00000560834 PCDHB14Q9Y5E9 798 aa6.52□□□□□ -1.37
CTDSPL2-210ENST00000560834 HEMK1Q9Y5R4 338 aaPredicted RBP6.52□□□□□ -1.37
CTDSPL2-210ENST00000560834 SNX8Q9Y5X2 465 aa6.52□□□□□ -1.37
CTDSPL2-210ENST00000560834 KCNMB2Q9Y691 235 aa6.52□□□□□ -1.37
CTDSPL2-210ENST00000560834 ATMQ13315 3056 aa6.51□□□□□ -1.37
CTDSPL2-210ENST00000560834 LOC100653049A0A140TA62 436 aa6.51□□□□□ -1.37
CTDSPL2-210ENST00000560834 MAN1A2O60476 641 aa6.51□□□□□ -1.37
CTDSPL2-210ENST00000560834 ZNF354AO60765 605 aaPredicted RBP6.51□□□□□ -1.37
CTDSPL2-210ENST00000560834 ERN1O75460 977 aaKnown RBP6.51□□□□□ -1.37
CTDSPL2-210ENST00000560834 CEACAM4O75871 244 aa6.51□□□□□ -1.37
CTDSPL2-210ENST00000560834 BCAS2O75934 225 aaPredicted RBP6.51□□□□□ -1.37
CTDSPL2-210ENST00000560834 KRT34O76011 436 aa6.51□□□□□ -1.37
CTDSPL2-210ENST00000560834 UBOX5O94941 541 aa6.51□□□□□ -1.37
CTDSPL2-210ENST00000560834 KCNH1O95259 989 aa6.51□□□□□ -1.37
CTDSPL2-210ENST00000560834 NADKO95544 446 aaPredicted RBP6.51□□□□□ -1.37
CTDSPL2-210ENST00000560834 HMGN2P05204 90 aaKnown RBP6.51□□□□□ -1.37
CTDSPL2-210ENST00000560834 T-ENOLP0DO92 83 aa6.51□□□□□ -1.37
CTDSPL2-210ENST00000560834 BMP2P12643 396 aa6.51□□□□□ -1.37
CTDSPL2-210ENST00000560834 UQCRC2P22695 453 aa6.51□□□□□ -1.37
CTDSPL2-210ENST00000560834 CPA2P48052 419 aa6.51□□□□□ -1.37
CTDSPL2-210ENST00000560834 TRPC1P48995 793 aa6.51□□□□□ -1.37
CTDSPL2-210ENST00000560834 CCT3P49368 545 aaKnown RBP6.51□□□□□ -1.37
CTDSPL2-210ENST00000560834 NUDT2P50583 147 aa6.51□□□□□ -1.37
CTDSPL2-210ENST00000560834 CLCN2P51788 898 aa6.51□□□□□ -1.37
CTDSPL2-210ENST00000560834 RRADP55042 308 aa6.51□□□□□ -1.37
CTDSPL2-210ENST00000560834 SOX8P57073 446 aa6.51□□□□□ -1.37
CTDSPL2-210ENST00000560834 RPS26P62854 115 aaKnown RBP6.51□□□□□ -1.37
CTDSPL2-210ENST00000560834 CXADRP78310 365 aa6.51□□□□□ -1.37
CTDSPL2-210ENST00000560834 RNF4P78317 190 aa6.51□□□□□ -1.37
CTDSPL2-210ENST00000560834 PRR5P85299 388 aa6.51□□□□□ -1.37
CTDSPL2-210ENST00000560834 PSG6Q00889 435 aa6.51□□□□□ -1.37
CTDSPL2-210ENST00000560834 TP53BP2Q13625 1128 aa6.51□□□□□ -1.37
CTDSPL2-210ENST00000560834 NFYCQ13952 458 aa6.51□□□□□ -1.37
CTDSPL2-210ENST00000560834 SELPLGQ14242 412 aa6.51□□□□□ -1.37
CTDSPL2-210ENST00000560834 CAPRIN1Q14444 709 aaKnown RBP6.51□□□□□ -1.37
CTDSPL2-210ENST00000560834 LASP1Q14847 261 aaKnown RBP6.51□□□□□ -1.37
CTDSPL2-210ENST00000560834 NNATQ16517 81 aa6.51□□□□□ -1.37
CTDSPL2-210ENST00000560834 SPDYE7PQ495Y7 208 aa6.51□□□□□ -1.37
CTDSPL2-210ENST00000560834 B3GNTL1Q67FW5 361 aaPredicted RBP6.51□□□□□ -1.37
CTDSPL2-210ENST00000560834 H3F3CQ6NXT2 135 aa6.51□□□□□ -1.37
CTDSPL2-210ENST00000560834 CDC73Q6P1J9 531 aa6.51□□□□□ -1.37
CTDSPL2-210ENST00000560834 C6orf89Q6UWU4 347 aa6.51□□□□□ -1.37
CTDSPL2-210ENST00000560834 HSDL2Q6YN16 418 aa6.51□□□□□ -1.37
CTDSPL2-210ENST00000560834 C16orf47Q6ZP98 133 aaPredicted RBP6.51□□□□□ -1.37
CTDSPL2-210ENST00000560834 PRICKLE2Q7Z3G6 844 aa6.51□□□□□ -1.37
CTDSPL2-210ENST00000560834 SZRD1Q7Z422 152 aa6.51□□□□□ -1.37
CTDSPL2-210ENST00000560834 WDR53Q7Z5U6 358 aaPredicted RBP6.51□□□□□ -1.37
CTDSPL2-210ENST00000560834 KBTBD2Q8IY47 623 aa6.51□□□□□ -1.37
CTDSPL2-210ENST00000560834 LGI4Q8N135 537 aa6.51□□□□□ -1.37
CTDSPL2-210ENST00000560834 C10orf111Q8N326 155 aa6.51□□□□□ -1.37
CTDSPL2-210ENST00000560834 GALNT16Q8N428 558 aa6.51□□□□□ -1.37
CTDSPL2-210ENST00000560834 CLEC1AQ8NC01 280 aa6.51□□□□□ -1.37
CTDSPL2-210ENST00000560834 FBXO27Q8NI29 283 aa6.51□□□□□ -1.37
CTDSPL2-210ENST00000560834 NUBPLQ8TB37 319 aa6.51□□□□□ -1.37
CTDSPL2-210ENST00000560834 FBXO30Q8TB52 745 aa6.51□□□□□ -1.37
CTDSPL2-210ENST00000560834 PNPT1Q8TCS8 783 aaKnown RBP6.51□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms